| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620423
Identifier: 116620423
GI number: 116620423
Start: 1601219
End: 1601512
Strand: Reverse
Name: 116620423
Synonym: Acid_1300
Alternate gene names: NA
Gene position: 1601512-1601219 (Counterclockwise)
Preceding gene: 116620424
Following gene: 116620422
Centisome position: 16.07
GC content: 56.8
Gene sequence:
>294_bases ATGGCGACATCCCTTCCCGAACAACCGAAAGATCGGCGATTTCAGTTGCGTGCCACTGCTCGCGAGGAGACGCTCATAAG AGTGGCCGCTGAGCGGCGGGGAATCAATGTGACGGAGTTCATTCTCGGCGCCGCGCGCGAGAAGGCCGAGGAATCACTGA CCGATCAAACAAAATTCGTGCTTGATGAAAAGCAATGGAAGCAGTTCATGGAGGCACTCGATCGGCCGGCCCGGGAAAAA CCGCGCCTGAAGAAGCTCTTTGCGGAACCTCATGTCGCTAAACGGCGCTCATGA
Upstream 100 bases:
>100_bases GGGGCGCGATATGAAGGAGAACATCCTGGAAGCCACGATCATGAACCGTCCGGGATGAATTTCGGAGTACATTGGCAGTA CAATGAAGTTGGAGTCTGTC
Downstream 100 bases:
>100_bases GTTCCGAAACGCTCTATATCGAAAAGCTCCGCCGCGAGCACGACCTCTCCAGCTTCGACTGTGGAAATGGAACCCTGACC GCGTGGCTGCAAAAATTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MATSLPEQPKDRRFQLRATAREETLIRVAAERRGINVTEFILGAAREKAEESLTDQTKFVLDEKQWKQFMEALDRPAREK PRLKKLFAEPHVAKRRS
Sequences:
>Translated_97_residues MATSLPEQPKDRRFQLRATAREETLIRVAAERRGINVTEFILGAAREKAEESLTDQTKFVLDEKQWKQFMEALDRPAREK PRLKKLFAEPHVAKRRS >Mature_96_residues ATSLPEQPKDRRFQLRATAREETLIRVAAERRGINVTEFILGAAREKAEESLTDQTKFVLDEKQWKQFMEALDRPAREKP RLKKLFAEPHVAKRRS
Specific function: Unknown
COG id: COG4453
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11363; Mature: 11232
Theoretical pI: Translated: 10.84; Mature: 10.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSLPEQPKDRRFQLRATAREETLIRVAAERRGINVTEFILGAAREKAEESLTDQTKFV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LDEKQWKQFMEALDRPAREKPRLKKLFAEPHVAKRRS HCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCC >Mature Secondary Structure ATSLPEQPKDRRFQLRATAREETLIRVAAERRGINVTEFILGAAREKAEESLTDQTKFV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LDEKQWKQFMEALDRPAREKPRLKKLFAEPHVAKRRS HCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA