| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620424
Identifier: 116620424
GI number: 116620424
Start: 1601555
End: 1603651
Strand: Reverse
Name: 116620424
Synonym: Acid_1301
Alternate gene names: NA
Gene position: 1603651-1601555 (Counterclockwise)
Preceding gene: 116620425
Following gene: 116620423
Centisome position: 16.09
GC content: 62.23
Gene sequence:
>2097_bases ATGGCACCGAGCGACGGGCTCCGCAAGATCGCGATTCTGGGCGGGGGAGTATCGGGACTGGCCGCTGCCATGCGGCTGAC GGAAGATCCCGAATGGAAGACGAAGTACGAGGTGACGCTGTATCAGATGGGATGGCGGCTGGGCGGCAAATGCGCGAGCG GCCGCTCGGGGCCGGGCAACCGCATCGAAGAGCACGGCATCCACATCTGGCTGGGATTTTACGAGAACGCGTTCCGCATG ATCCAGCAGGCGTATGAGCAGAACTATGCATCGACGGCCCCGACTTGCCCGATCCGCACGTGGGACCAGGCTTTCAAGCC GCACAGCTTCATCTGCCTGACAGAGAACATCGCGGACCAGTGGAAGGTGTGGCCGATCGAATTCCCGGTGAACACTGGCG TTCCTGGCAGCGGCGGCGATGTGCCGACGATGCTGGAGTTCATCGAGATGGTGGTGCAGTGGCTGGCCGAGCTGTTCGGC CGGTCGAAGATGGCGGGTCACGCGCTGACTCCGACCGAGCACCAATCGCACGGGGCGTTCCTGGATACGGTGAGCGGCTT CTTCCGCGGGATTGAGCACGACGTGGAGGAGGGCGCGCTGAACATCGGGGCGCACGTGCTGGTGCTGCTGCGCGCGACAA TCGAAGCGGCGCACAAGGCGGTAGACCTGACGCCCTTCGGCTGCGTGGTGCGCGACCTGCGCCAGCATTTCATGAACTGG CTGTGGTCGAAGGCGGAACCCACGCTGCACGTGGACGATGAATTACGGCGCCTGTTCCTGATCATGGACACGGGTCTCAC GACCATCACCGGACTGTTCATGGAGGGCGTGATCACTGATCCGGCGGATCTGGACAAGCTGGAAGAGGAATACCTGCTGT GGCTGAAGAAGTGGGGCGCGTTCGATATCTGCACCAATATCAAGACGTCGGCAATCGCGCGCGGGCTGTACGATTTGGTG TTCGCGTACGAGAATGGCGACACGTCCAAGCCCTCGTTCGCGGCGGGGCCGGCGATCCGCAGCATTATCAAGATGGTGTT CTGCTACAAGGGCGCGATCTTCTGGAAGATGCAGGCGGGGACGGCGGATGCCACGGTGACGCCGATCTACAGCGTGTTGA AGCAGCGCGGCGTGAAGTTCCAGTTCTTCCACAAGGTGCTGAACCTGGGATTGAGCGCGGATAAGAGCGCGATCGAGACG GTCCTCCTGGAAGAACAGGTGGAGTTACAGAATCCCGCGCAGGAGTATTACCCGATGTTCGATCCGCAGGGCAACGGGCT CCTGTGCTGGCCGAGCCAGCCGCTCTATGACCAGATCAAGGATGGCGAGAGTCTGAAGGGTTACGACCTGGAATCCTTCT GGACGACGTGGAAGGGGACGCAGAAGACGCTGACGGTGGGCCAGGAATTCGACGAGGTGGTGCTGTGCATTTCGCTGGGC AGCATGCCGTACATCTGCCCCGAACTGGTCACGGCATTTCCGGATTCCTGGGGCAAGATGGTGACGACGATGCAGACGGT CCGCACGCAGGCTTACCAGGCGTGGATGAGCGCGGGGTTGAAGGACCTGGGCTGGCAGCAGGCAAGCCCGGTGCTGGATG CGTTCGCGGAGCCGATGGACACGTGGGCCGATATGAGCCAGGTGCTGCCGCGCGAGACGTGGCCGACGATGCCGGCGAGC GTCCAGTATTTCTGCAGCGCGATGCCGGGCGGAATTCCGCCGCAGAGCGACGCGGAGTTTCCGGCGGAAGCGAAGGCGGC GGTGAAGGAGAACGTCTCTGAATTCACGAAGGACAGCCTGCCGGTGCTGTGGCCGGACTACAAACAGTCGCAGGTGACGT CGGAGTATTTCCGCGCGAATATCGACCCGAGCGAACGGTACGTGCTATCGGTGGCGGGAAGCACGAGCGCGCGGCTGCGG GCGAATGAATCGGGCGTGGGGAATTTATTCCTGGCGGGTGATTGGATCGACAACGGGTTTAACGCGGGGTGCGTGGAGGC TTCGGTGATGTCGGGTTTTCAGGCGGCGAATGCGGCGATGGGGCGCGATATGAAGGAGAACATCCTGGAAGCCACGATCA TGAACCGTCCGGGATGA
Upstream 100 bases:
>100_bases CGCGGGCCAATCGGTGACGCCGATTCTGAGCTACTTCGTGGATTTCGATTTCGAGATCGGCGTGGGCACGGAGATCTGGA ACGCGCAGGGGGGCAAGTAA
Downstream 100 bases:
>100_bases ATTTCGGAGTACATTGGCAGTACAATGAAGTTGGAGTCTGTCATGGCGACATCCCTTCCCGAACAACCGAAAGATCGGCG ATTTCAGTTGCGTGCCACTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 698; Mature: 697
Protein sequence:
>698_residues MAPSDGLRKIAILGGGVSGLAAAMRLTEDPEWKTKYEVTLYQMGWRLGGKCASGRSGPGNRIEEHGIHIWLGFYENAFRM IQQAYEQNYASTAPTCPIRTWDQAFKPHSFICLTENIADQWKVWPIEFPVNTGVPGSGGDVPTMLEFIEMVVQWLAELFG RSKMAGHALTPTEHQSHGAFLDTVSGFFRGIEHDVEEGALNIGAHVLVLLRATIEAAHKAVDLTPFGCVVRDLRQHFMNW LWSKAEPTLHVDDELRRLFLIMDTGLTTITGLFMEGVITDPADLDKLEEEYLLWLKKWGAFDICTNIKTSAIARGLYDLV FAYENGDTSKPSFAAGPAIRSIIKMVFCYKGAIFWKMQAGTADATVTPIYSVLKQRGVKFQFFHKVLNLGLSADKSAIET VLLEEQVELQNPAQEYYPMFDPQGNGLLCWPSQPLYDQIKDGESLKGYDLESFWTTWKGTQKTLTVGQEFDEVVLCISLG SMPYICPELVTAFPDSWGKMVTTMQTVRTQAYQAWMSAGLKDLGWQQASPVLDAFAEPMDTWADMSQVLPRETWPTMPAS VQYFCSAMPGGIPPQSDAEFPAEAKAAVKENVSEFTKDSLPVLWPDYKQSQVTSEYFRANIDPSERYVLSVAGSTSARLR ANESGVGNLFLAGDWIDNGFNAGCVEASVMSGFQAANAAMGRDMKENILEATIMNRPG
Sequences:
>Translated_698_residues MAPSDGLRKIAILGGGVSGLAAAMRLTEDPEWKTKYEVTLYQMGWRLGGKCASGRSGPGNRIEEHGIHIWLGFYENAFRM IQQAYEQNYASTAPTCPIRTWDQAFKPHSFICLTENIADQWKVWPIEFPVNTGVPGSGGDVPTMLEFIEMVVQWLAELFG RSKMAGHALTPTEHQSHGAFLDTVSGFFRGIEHDVEEGALNIGAHVLVLLRATIEAAHKAVDLTPFGCVVRDLRQHFMNW LWSKAEPTLHVDDELRRLFLIMDTGLTTITGLFMEGVITDPADLDKLEEEYLLWLKKWGAFDICTNIKTSAIARGLYDLV FAYENGDTSKPSFAAGPAIRSIIKMVFCYKGAIFWKMQAGTADATVTPIYSVLKQRGVKFQFFHKVLNLGLSADKSAIET VLLEEQVELQNPAQEYYPMFDPQGNGLLCWPSQPLYDQIKDGESLKGYDLESFWTTWKGTQKTLTVGQEFDEVVLCISLG SMPYICPELVTAFPDSWGKMVTTMQTVRTQAYQAWMSAGLKDLGWQQASPVLDAFAEPMDTWADMSQVLPRETWPTMPAS VQYFCSAMPGGIPPQSDAEFPAEAKAAVKENVSEFTKDSLPVLWPDYKQSQVTSEYFRANIDPSERYVLSVAGSTSARLR ANESGVGNLFLAGDWIDNGFNAGCVEASVMSGFQAANAAMGRDMKENILEATIMNRPG >Mature_697_residues APSDGLRKIAILGGGVSGLAAAMRLTEDPEWKTKYEVTLYQMGWRLGGKCASGRSGPGNRIEEHGIHIWLGFYENAFRMI QQAYEQNYASTAPTCPIRTWDQAFKPHSFICLTENIADQWKVWPIEFPVNTGVPGSGGDVPTMLEFIEMVVQWLAELFGR SKMAGHALTPTEHQSHGAFLDTVSGFFRGIEHDVEEGALNIGAHVLVLLRATIEAAHKAVDLTPFGCVVRDLRQHFMNWL WSKAEPTLHVDDELRRLFLIMDTGLTTITGLFMEGVITDPADLDKLEEEYLLWLKKWGAFDICTNIKTSAIARGLYDLVF AYENGDTSKPSFAAGPAIRSIIKMVFCYKGAIFWKMQAGTADATVTPIYSVLKQRGVKFQFFHKVLNLGLSADKSAIETV LLEEQVELQNPAQEYYPMFDPQGNGLLCWPSQPLYDQIKDGESLKGYDLESFWTTWKGTQKTLTVGQEFDEVVLCISLGS MPYICPELVTAFPDSWGKMVTTMQTVRTQAYQAWMSAGLKDLGWQQASPVLDAFAEPMDTWADMSQVLPRETWPTMPASV QYFCSAMPGGIPPQSDAEFPAEAKAAVKENVSEFTKDSLPVLWPDYKQSQVTSEYFRANIDPSERYVLSVAGSTSARLRA NESGVGNLFLAGDWIDNGFNAGCVEASVMSGFQAANAAMGRDMKENILEATIMNRPG
Specific function: Unknown
COG id: COG3349
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77496; Mature: 77365
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPSDGLRKIAILGGGVSGLAAAMRLTEDPEWKTKYEVTLYQMGWRLGGKCASGRSGPGN CCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC RIEEHGIHIWLGFYENAFRMIQQAYEQNYASTAPTCPIRTWDQAFKPHSFICLTENIADQ CHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCC WKVWPIEFPVNTGVPGSGGDVPTMLEFIEMVVQWLAELFGRSKMAGHALTPTEHQSHGAF CEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH LDTVSGFFRGIEHDVEEGALNIGAHVLVLLRATIEAAHKAVDLTPFGCVVRDLRQHFMNW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LWSKAEPTLHVDDELRRLFLIMDTGLTTITGLFMEGVITDPADLDKLEEEYLLWLKKWGA HHCCCCCCEEECHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC FDICTNIKTSAIARGLYDLVFAYENGDTSKPSFAAGPAIRSIIKMVFCYKGAIFWKMQAG HHHHHCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECC TADATVTPIYSVLKQRGVKFQFFHKVLNLGLSADKSAIETVLLEEQVELQNPAQEYYPMF CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCC DPQGNGLLCWPSQPLYDQIKDGESLKGYDLESFWTTWKGTQKTLTVGQEFDEVVLCISLG CCCCCEEEECCCCCHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEECCCCHHHEEEEEECC SMPYICPELVTAFPDSWGKMVTTMQTVRTQAYQAWMSAGLKDLGWQQASPVLDAFAEPMD CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHH TWADMSQVLPRETWPTMPASVQYFCSAMPGGIPPQSDAEFPAEAKAAVKENVSEFTKDSL HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC PVLWPDYKQSQVTSEYFRANIDPSERYVLSVAGSTSARLRANESGVGNLFLAGDWIDNGF CCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCC NAGCVEASVMSGFQAANAAMGRDMKENILEATIMNRPG CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC >Mature Secondary Structure APSDGLRKIAILGGGVSGLAAAMRLTEDPEWKTKYEVTLYQMGWRLGGKCASGRSGPGN CCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC RIEEHGIHIWLGFYENAFRMIQQAYEQNYASTAPTCPIRTWDQAFKPHSFICLTENIADQ CHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCC WKVWPIEFPVNTGVPGSGGDVPTMLEFIEMVVQWLAELFGRSKMAGHALTPTEHQSHGAF CEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH LDTVSGFFRGIEHDVEEGALNIGAHVLVLLRATIEAAHKAVDLTPFGCVVRDLRQHFMNW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LWSKAEPTLHVDDELRRLFLIMDTGLTTITGLFMEGVITDPADLDKLEEEYLLWLKKWGA HHCCCCCCEEECHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC FDICTNIKTSAIARGLYDLVFAYENGDTSKPSFAAGPAIRSIIKMVFCYKGAIFWKMQAG HHHHHCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECC TADATVTPIYSVLKQRGVKFQFFHKVLNLGLSADKSAIETVLLEEQVELQNPAQEYYPMF CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCC DPQGNGLLCWPSQPLYDQIKDGESLKGYDLESFWTTWKGTQKTLTVGQEFDEVVLCISLG CCCCCEEEECCCCCHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEECCCCHHHEEEEEECC SMPYICPELVTAFPDSWGKMVTTMQTVRTQAYQAWMSAGLKDLGWQQASPVLDAFAEPMD CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHH TWADMSQVLPRETWPTMPASVQYFCSAMPGGIPPQSDAEFPAEAKAAVKENVSEFTKDSL HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC PVLWPDYKQSQVTSEYFRANIDPSERYVLSVAGSTSARLRANESGVGNLFLAGDWIDNGF CCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCC NAGCVEASVMSGFQAANAAMGRDMKENILEATIMNRPG CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA