| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620393
Identifier: 116620393
GI number: 116620393
Start: 1567942
End: 1568961
Strand: Direct
Name: 116620393
Synonym: Acid_1270
Alternate gene names: NA
Gene position: 1567942-1568961 (Clockwise)
Preceding gene: 116620389
Following gene: 116620399
Centisome position: 15.73
GC content: 58.73
Gene sequence:
>1020_bases ATGCCGTCCGCTCAACGCGTGAATTGGGCCAAGTTCCGGGTATTGGCCGTGGCCGTGGCGGCGTCGTTGATTCTGGGTAC GATCTCTTATCTGTTGACCGGCGGCACGATTTTCGAGCCCAAAGCCAGGCTTTATATCTATATGGACGACGCCACCGGCC TGGCGTCCGGATCGCCCGTCCGGGTGGATGGGATCGGCGTCGGGAAGGTGGACCTGGTGGAACTTTCCGGCTCCAATGAT CCCCAGCGCGTCGTGCGTGTATCGGTGAAAGTGGACCGCGACAGGCTGGACGCGATCACCACGGATTCGACCGCCCAGGC TTCGACAGACAGTCCGATCGGCGACAAATTCGTGGACATCACGAGCGGAGTTAATCCGCAGCATCTGCAGCCCGGAGCGG AGATCACGTTCAAGGGCACGCCTGAGCTGATGAAGAGTATCGACCTGGCGACCTTTCAGAAGAAAATTCACGAGATCGAG CTGTTGCTCGATGATGTGGAGCAGGCGCGTTCGCCGCTCGGGAAATTCATCGCGGGCGAAGAGTTGTACACCGAGTTGAA CAATAAGATTCGGGCGCTACAGCAAAGCATGCATGCGGCGGCGGATACCACCAGCGCAGTGGGCCAGGCGCTGTACACCG ACAAGTTGTACCGCCAGGCGATGGAGCCGCTTCAAAGACTGGACGAGAGCCTGGCGAAACTGCAATCGGGGCAGGGAAGC ATGGGGCAGATGCTGCGCGACGGCCAGCAATACGCCTCGGCGCTCGGACAGGTTGGAGAATTGCGCAACTCGATCGCCAG CATGAAGCGCGCCGACATGATGAACTCGGATCAAATGCACCGCGACTTGAGCCGGCAGGTAGAGACGATGATTCAAGCCG TCGATACCTTCAATGCGGGACCGCTGCTTACCACCTCGGCGGTATACGACAATCTCAACGGAATGGCCCGGGAACTTCAC GGCACACTGAAGGATTTTCGGGAGAACCCCAAGAAGTTTTTGCGGCTAAAGCTGTTTTGA
Upstream 100 bases:
>100_bases ATCGTTTCCATCAAAAAACCTCTCTATGTCTAGACGCTATTAGTGTAACCCACGTTACCCGCAATCGTCGCGGCCGGTCA CGCGGTACAATCCGAAGTGA
Downstream 100 bases:
>100_bases GAACCGGGACAGGCCGGTGATCCAGCCTGTCCCTTTTTCGGTGGCTACTGCTTAGAGGAAGGCCCGCTGATATCGCCGAT GCCGATCGGCTCGCCCGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MPSAQRVNWAKFRVLAVAVAASLILGTISYLLTGGTIFEPKARLYIYMDDATGLASGSPVRVDGIGVGKVDLVELSGSND PQRVVRVSVKVDRDRLDAITTDSTAQASTDSPIGDKFVDITSGVNPQHLQPGAEITFKGTPELMKSIDLATFQKKIHEIE LLLDDVEQARSPLGKFIAGEELYTELNNKIRALQQSMHAAADTTSAVGQALYTDKLYRQAMEPLQRLDESLAKLQSGQGS MGQMLRDGQQYASALGQVGELRNSIASMKRADMMNSDQMHRDLSRQVETMIQAVDTFNAGPLLTTSAVYDNLNGMARELH GTLKDFRENPKKFLRLKLF
Sequences:
>Translated_339_residues MPSAQRVNWAKFRVLAVAVAASLILGTISYLLTGGTIFEPKARLYIYMDDATGLASGSPVRVDGIGVGKVDLVELSGSND PQRVVRVSVKVDRDRLDAITTDSTAQASTDSPIGDKFVDITSGVNPQHLQPGAEITFKGTPELMKSIDLATFQKKIHEIE LLLDDVEQARSPLGKFIAGEELYTELNNKIRALQQSMHAAADTTSAVGQALYTDKLYRQAMEPLQRLDESLAKLQSGQGS MGQMLRDGQQYASALGQVGELRNSIASMKRADMMNSDQMHRDLSRQVETMIQAVDTFNAGPLLTTSAVYDNLNGMARELH GTLKDFRENPKKFLRLKLF >Mature_338_residues PSAQRVNWAKFRVLAVAVAASLILGTISYLLTGGTIFEPKARLYIYMDDATGLASGSPVRVDGIGVGKVDLVELSGSNDP QRVVRVSVKVDRDRLDAITTDSTAQASTDSPIGDKFVDITSGVNPQHLQPGAEITFKGTPELMKSIDLATFQKKIHEIEL LLDDVEQARSPLGKFIAGEELYTELNNKIRALQQSMHAAADTTSAVGQALYTDKLYRQAMEPLQRLDESLAKLQSGQGSM GQMLRDGQQYASALGQVGELRNSIASMKRADMMNSDQMHRDLSRQVETMIQAVDTFNAGPLLTTSAVYDNLNGMARELHG TLKDFRENPKKFLRLKLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37151; Mature: 37020
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSAQRVNWAKFRVLAVAVAASLILGTISYLLTGGTIFEPKARLYIYMDDATGLASGSPV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEEECCCCCCCCCCE RVDGIGVGKVDLVELSGSNDPQRVVRVSVKVDRDRLDAITTDSTAQASTDSPIGDKFVDI EEECCCCCCEEEEEECCCCCHHHEEEEEEEECHHHHHHCCCCCCCCCCCCCCCCCHHHHH TSGVNPQHLQPGAEITFKGTPELMKSIDLATFQKKIHEIELLLDDVEQARSPLGKFIAGE CCCCCHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELYTELNNKIRALQQSMHAAADTTSAVGQALYTDKLYRQAMEPLQRLDESLAKLQSGQGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH MGQMLRDGQQYASALGQVGELRNSIASMKRADMMNSDQMHRDLSRQVETMIQAVDTFNAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC PLLTTSAVYDNLNGMARELHGTLKDFRENPKKFLRLKLF CCEEHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHEECCC >Mature Secondary Structure PSAQRVNWAKFRVLAVAVAASLILGTISYLLTGGTIFEPKARLYIYMDDATGLASGSPV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEEECCCCCCCCCCE RVDGIGVGKVDLVELSGSNDPQRVVRVSVKVDRDRLDAITTDSTAQASTDSPIGDKFVDI EEECCCCCCEEEEEECCCCCHHHEEEEEEEECHHHHHHCCCCCCCCCCCCCCCCCHHHHH TSGVNPQHLQPGAEITFKGTPELMKSIDLATFQKKIHEIELLLDDVEQARSPLGKFIAGE CCCCCHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELYTELNNKIRALQQSMHAAADTTSAVGQALYTDKLYRQAMEPLQRLDESLAKLQSGQGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH MGQMLRDGQQYASALGQVGELRNSIASMKRADMMNSDQMHRDLSRQVETMIQAVDTFNAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC PLLTTSAVYDNLNGMARELHGTLKDFRENPKKFLRLKLF CCEEHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA