| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620380
Identifier: 116620380
GI number: 116620380
Start: 1554893
End: 1556842
Strand: Direct
Name: 116620380
Synonym: Acid_1257
Alternate gene names: NA
Gene position: 1554893-1556842 (Clockwise)
Preceding gene: 116620379
Following gene: 116620382
Centisome position: 15.6
GC content: 64.51
Gene sequence:
>1950_bases ATGGGACAATGCGCGGCATTCGCTTACCTTTGTTGCGCGGCGTTCGGACAGGCCAGCGAGGTCGATCCGGTGCAGGCGAA GCTTGCGGCGATTTCCCGGGCACGAGCGGAAGGCAGGTTTGCCGAAACCGTCCGGTTGCGCGAAGAGGCCCGGCGGCTGC TGGATGTGTTGCCGCCTGATTCCCCGCAATTTGCCGGTTGGACGGAAATGGTGGCGCAGGTTTACAACGAGGCCGGATGG ACGGCGCGGGCGCGGGGCATGCTGCAGGCGGCGCTCGATCGCACGGGCACCCTCGGCGCCACAATCCCGGCACGGTTTCA ATTACTGACCGCGATTGCCACCTCCTGGCAGGAGAACCACAACCTGCCGAAGGCAGTGGAATACCTGGAGAAAGCCGTCG CCGCGTCACATTTTCAACACGGAAACTCAGGCGGCGAATGGAATGCCACCAGGGAACTCTACGAGCGCCTCGCCGCGCTT CAACAACAGTTGGGCCATCCGAACGCCTCGGCGGAGTGGAAGCGGAAACTGCGCGACCTGGCGGCGCAGGCCGGCGATCG CGAGCTGGCGCGGCATTTCGAGCAGGAGGAGCAGTTTGGCCAGGCCGCGGCGATTTATAGACGCGCTCTGCAGCACGCGG CGACCCCGCAAGAAGCGAGCGAATTGCTGCAGAACCTGGCGGGTGCTTTACAGCTGGACGAGAAGTTCGACGAAGCGATC GCCGCTCAACGACAGGCGATCGCGCGCAGCGAAGACCGCGAGCAGGCGACGGGCGCGCGCCAGGTGTTGGCACAGATTCT GCAGCAGGCGGGGCGCGCGGAAGAGGCAGAGGCCGTCTATCAGGAAATTCTCGCCGGCGGAAGTGGCGATGGGCAACTGC CGGCGCTGGCCATGTATGCCAATTTCCTGGCGTCAACGAAACGCGGCCCGCAGGCTCTTGCGATGCTCAAGAGTTTTGAG GCGAGCGGCGCGCGGACCACAGCGTGGGGCCATACGGTGCTTTTCAGCGCCCTGGCGAACTGTTCGCGGAGTATTGGCCA GGACGAGGAGGCCGCAAAGTACGAGGCGCTGATTCGGGCGAAGCCGGCGGAATTGGTGCCGCAGCTCGCCGCGATGCCAT CCGGCGACGAACTCTTCCAGCAGGCGGAATCCGCAGCGAAGGCAGGGCGAACCGGAGAGTCCTTCGAGCTTGCGATGCAG GCGCTGGACGCGATCCGGCGCGCGGAGAATCGCGACCAGATTGGCTGGCAGATCCCCGCGATCGCGGCCGCCATGACGGA GAAAGGAGGAGCCGGCGCCGCGGAGCAACTCTATCAGAGCGCGATTTCGCTGGCGGAGAGCTGGTCGGAAGAGAGTATTC AACCGCTGCTGAATCTCCTGTCAGGTCGCCTGACGGCGTTGATCGGCGATCCGAAACGGCGCGGCGAGGCGCGTTCCGAA GTCGAACGCTATCGCGAACTTCTGATCGCGGCGCACGGGGCGGATAGCGGGATGCAGGAGGCGGCGCTGCGCGTTGCGAT CGAACTCGGGCGTCCGTCCGTGATTCCTGCGCTGGATCTGGTGGCATTTGAAGAAACTGTGAACGGCGGCACAAGCGAGC CTTACGCGGAGGCGCTGGGAGCGCTGGCCGGTGTCCATGAAGGAAATCAGGATTGGGAGGCCGCCGCAAAAGTGCGCAGG AGAATTGTGCAGTTGGGGGACCTGCTGTATCCGGCGAACGACGCGCAGCGCGGTCAGATGCGGGTTGATCTGGCGCTGGC GCTGGCGAACCTGGGGCAGTTCGAAGAGGCGGAAGCCTTGACGCTTGAGGCGATTTCTGTGGGAGATGGTACCAGGAGAA CGCCTGGAGTTTCGTTTGAGGCCGCACTGCAACAGATCCGCCGGATGCGGGCTACCAGCCAGATGCGTGCTACCAGCGCA AGTCTAAAGCCAGGGCGCCTTCCAGGGTGA
Upstream 100 bases:
>100_bases TCAGCCAGGAGGAGTGTGGACTCCAGAATGCTTTTAAGGCGCAGCGATGCGACCGAAACGGCTCGGGAACTACAGCGCAA ACCATGGGGTCTACATCTTC
Downstream 100 bases:
>100_bases GCAGCCGCTTTTTCAGCGGGAGGCCGCCGCCGTAGCCAACGAGTCTGCCAGTAGAGCCGATTACGCGATGGCAGGGGATC ACGATCGGGATCGGGTTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 649; Mature: 648
Protein sequence:
>649_residues MGQCAAFAYLCCAAFGQASEVDPVQAKLAAISRARAEGRFAETVRLREEARRLLDVLPPDSPQFAGWTEMVAQVYNEAGW TARARGMLQAALDRTGTLGATIPARFQLLTAIATSWQENHNLPKAVEYLEKAVAASHFQHGNSGGEWNATRELYERLAAL QQQLGHPNASAEWKRKLRDLAAQAGDRELARHFEQEEQFGQAAAIYRRALQHAATPQEASELLQNLAGALQLDEKFDEAI AAQRQAIARSEDREQATGARQVLAQILQQAGRAEEAEAVYQEILAGGSGDGQLPALAMYANFLASTKRGPQALAMLKSFE ASGARTTAWGHTVLFSALANCSRSIGQDEEAAKYEALIRAKPAELVPQLAAMPSGDELFQQAESAAKAGRTGESFELAMQ ALDAIRRAENRDQIGWQIPAIAAAMTEKGGAGAAEQLYQSAISLAESWSEESIQPLLNLLSGRLTALIGDPKRRGEARSE VERYRELLIAAHGADSGMQEAALRVAIELGRPSVIPALDLVAFEETVNGGTSEPYAEALGALAGVHEGNQDWEAAAKVRR RIVQLGDLLYPANDAQRGQMRVDLALALANLGQFEEAEALTLEAISVGDGTRRTPGVSFEAALQQIRRMRATSQMRATSA SLKPGRLPG
Sequences:
>Translated_649_residues MGQCAAFAYLCCAAFGQASEVDPVQAKLAAISRARAEGRFAETVRLREEARRLLDVLPPDSPQFAGWTEMVAQVYNEAGW TARARGMLQAALDRTGTLGATIPARFQLLTAIATSWQENHNLPKAVEYLEKAVAASHFQHGNSGGEWNATRELYERLAAL QQQLGHPNASAEWKRKLRDLAAQAGDRELARHFEQEEQFGQAAAIYRRALQHAATPQEASELLQNLAGALQLDEKFDEAI AAQRQAIARSEDREQATGARQVLAQILQQAGRAEEAEAVYQEILAGGSGDGQLPALAMYANFLASTKRGPQALAMLKSFE ASGARTTAWGHTVLFSALANCSRSIGQDEEAAKYEALIRAKPAELVPQLAAMPSGDELFQQAESAAKAGRTGESFELAMQ ALDAIRRAENRDQIGWQIPAIAAAMTEKGGAGAAEQLYQSAISLAESWSEESIQPLLNLLSGRLTALIGDPKRRGEARSE VERYRELLIAAHGADSGMQEAALRVAIELGRPSVIPALDLVAFEETVNGGTSEPYAEALGALAGVHEGNQDWEAAAKVRR RIVQLGDLLYPANDAQRGQMRVDLALALANLGQFEEAEALTLEAISVGDGTRRTPGVSFEAALQQIRRMRATSQMRATSA SLKPGRLPG >Mature_648_residues GQCAAFAYLCCAAFGQASEVDPVQAKLAAISRARAEGRFAETVRLREEARRLLDVLPPDSPQFAGWTEMVAQVYNEAGWT ARARGMLQAALDRTGTLGATIPARFQLLTAIATSWQENHNLPKAVEYLEKAVAASHFQHGNSGGEWNATRELYERLAALQ QQLGHPNASAEWKRKLRDLAAQAGDRELARHFEQEEQFGQAAAIYRRALQHAATPQEASELLQNLAGALQLDEKFDEAIA AQRQAIARSEDREQATGARQVLAQILQQAGRAEEAEAVYQEILAGGSGDGQLPALAMYANFLASTKRGPQALAMLKSFEA SGARTTAWGHTVLFSALANCSRSIGQDEEAAKYEALIRAKPAELVPQLAAMPSGDELFQQAESAAKAGRTGESFELAMQA LDAIRRAENRDQIGWQIPAIAAAMTEKGGAGAAEQLYQSAISLAESWSEESIQPLLNLLSGRLTALIGDPKRRGEARSEV ERYRELLIAAHGADSGMQEAALRVAIELGRPSVIPALDLVAFEETVNGGTSEPYAEALGALAGVHEGNQDWEAAAKVRRR IVQLGDLLYPANDAQRGQMRVDLALALANLGQFEEAEALTLEAISVGDGTRRTPGVSFEAALQQIRRMRATSQMRATSAS LKPGRLPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69938; Mature: 69807
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQCAAFAYLCCAAFGQASEVDPVQAKLAAISRARAEGRFAETVRLREEARRLLDVLPPD CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC SPQFAGWTEMVAQVYNEAGWTARARGMLQAALDRTGTLGATIPARFQLLTAIATSWQENH CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC NLPKAVEYLEKAVAASHFQHGNSGGEWNATRELYERLAALQQQLGHPNASAEWKRKLRDL CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH AAQAGDRELARHFEQEEQFGQAAAIYRRALQHAATPQEASELLQNLAGALQLDEKFDEAI HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH AAQRQAIARSEDREQATGARQVLAQILQQAGRAEEAEAVYQEILAGGSGDGQLPALAMYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH NFLASTKRGPQALAMLKSFEASGARTTAWGHTVLFSALANCSRSIGQDEEAAKYEALIRA HHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC KPAELVPQLAAMPSGDELFQQAESAAKAGRTGESFELAMQALDAIRRAENRDQIGWQIPA CCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHH IAAAMTEKGGAGAAEQLYQSAISLAESWSEESIQPLLNLLSGRLTALIGDPKRRGEARSE HHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHH VERYRELLIAAHGADSGMQEAALRVAIELGRPSVIPALDLVAFEETVNGGTSEPYAEALG HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH ALAGVHEGNQDWEAAAKVRRRIVQLGDLLYPANDAQRGQMRVDLALALANLGQFEEAEAL HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHH TLEAISVGDGTRRTPGVSFEAALQQIRRMRATSQMRATSASLKPGRLPG HHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure GQCAAFAYLCCAAFGQASEVDPVQAKLAAISRARAEGRFAETVRLREEARRLLDVLPPD CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC SPQFAGWTEMVAQVYNEAGWTARARGMLQAALDRTGTLGATIPARFQLLTAIATSWQENH CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC NLPKAVEYLEKAVAASHFQHGNSGGEWNATRELYERLAALQQQLGHPNASAEWKRKLRDL CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH AAQAGDRELARHFEQEEQFGQAAAIYRRALQHAATPQEASELLQNLAGALQLDEKFDEAI HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH AAQRQAIARSEDREQATGARQVLAQILQQAGRAEEAEAVYQEILAGGSGDGQLPALAMYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH NFLASTKRGPQALAMLKSFEASGARTTAWGHTVLFSALANCSRSIGQDEEAAKYEALIRA HHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC KPAELVPQLAAMPSGDELFQQAESAAKAGRTGESFELAMQALDAIRRAENRDQIGWQIPA CCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHH IAAAMTEKGGAGAAEQLYQSAISLAESWSEESIQPLLNLLSGRLTALIGDPKRRGEARSE HHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHH VERYRELLIAAHGADSGMQEAALRVAIELGRPSVIPALDLVAFEETVNGGTSEPYAEALG HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH ALAGVHEGNQDWEAAAKVRRRIVQLGDLLYPANDAQRGQMRVDLALALANLGQFEEAEAL HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHH TLEAISVGDGTRRTPGVSFEAALQQIRRMRATSQMRATSASLKPGRLPG HHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA