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The map label for this gene is ymdB [H]

Identifier: 116620301

GI number: 116620301

Start: 1449331

End: 1450110

Strand: Direct

Name: ymdB [H]

Synonym: Acid_1178

Alternate gene names: 116620301

Gene position: 1449331-1450110 (Clockwise)

Preceding gene: 116620299

Following gene: 116620302

Centisome position: 14.54

GC content: 62.44

Gene sequence:

>780_bases
GTGAACATTCTGTTTATCGGAGACATCTTCGGCTCGCCCGGCAGGCGTATTGTGGCGGACCACGTGGAAGACATTATTCA
GGCCAATTCCATTGACCTGGCTATCGCCAATGCGGAGAATGCGGCGGGCGGCTTCGGCATCACGCCCTCGATTGCCGAGG
ACCTCTTCGGCATGGGAATCGACGTCCTGACCAGCGGCAATCATGTCTGGGATAAACGGGAACTCTACGACTACCTGAAC
CGGCAGCCGCGCCTGCTGCGCCCGGCGAATTATCCCGAAGCGCCCGGCAGCGGCCTGGTGACGGTCCGGTCCCGCGGCGG
CGTGGAGTGCGCCGTGATGAACCTGCAGGGGCGCACCTATATGCCTTCGACAGATTGCCCTTTTCGTAAAGCCGATTCCC
TATTGAGCCAGATCGATCCTGCGGTTAAAGTAAAGTTCGTGGACTTCCATGCGGAGGTTACCAGCGAGAAAATGGCACTG
GGCTGGTACCTGGACGGGCGGGTTTCGGCGGTCGTGGGCACGCACACCCACGTGCCTACCGCGGACACGCGCATTCTGGC
GGGCGGAACCGCCTACCAGACGGATTGCGGCATGACGGGGCCGTACCAATCGGTGATCGGCGTGGACACTCCGACCATTT
TGCAGCGCTTCCTCACCAGTTTGCCGGTGCGCATGGAGGCCGCCCGGCATGGGGCGGAGTTGCATGCGGTGATCGTGGAT
GTGGACGAGGCCACGGGGAAGGCACGTGCCGTCCGGCGGCACGCGATCAACGGAGACTGA

Upstream 100 bases:

>100_bases
TGCCGCGCTGAGTGCCGCAGGGATGCGGGTGTTCATGGGACATAAACTTGAACATAGCAGACAGACCCCTACTTTCCGCA
CGTGCTAACTTGTAATCTCA

Downstream 100 bases:

>100_bases
ACCGATGGACCCTTCCAGCCCCGTTGCGGATCTCACCGCATTCTATATTCAGGAAATCGGGGCACTGCTTTTCGGAACGG
TGTTCTTATTTCTTTGGCGC

Product: metallophosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MNILFIGDIFGSPGRRIVADHVEDIIQANSIDLAIANAENAAGGFGITPSIAEDLFGMGIDVLTSGNHVWDKRELYDYLN
RQPRLLRPANYPEAPGSGLVTVRSRGGVECAVMNLQGRTYMPSTDCPFRKADSLLSQIDPAVKVKFVDFHAEVTSEKMAL
GWYLDGRVSAVVGTHTHVPTADTRILAGGTAYQTDCGMTGPYQSVIGVDTPTILQRFLTSLPVRMEAARHGAELHAVIVD
VDEATGKARAVRRHAINGD

Sequences:

>Translated_259_residues
MNILFIGDIFGSPGRRIVADHVEDIIQANSIDLAIANAENAAGGFGITPSIAEDLFGMGIDVLTSGNHVWDKRELYDYLN
RQPRLLRPANYPEAPGSGLVTVRSRGGVECAVMNLQGRTYMPSTDCPFRKADSLLSQIDPAVKVKFVDFHAEVTSEKMAL
GWYLDGRVSAVVGTHTHVPTADTRILAGGTAYQTDCGMTGPYQSVIGVDTPTILQRFLTSLPVRMEAARHGAELHAVIVD
VDEATGKARAVRRHAINGD
>Mature_259_residues
MNILFIGDIFGSPGRRIVADHVEDIIQANSIDLAIANAENAAGGFGITPSIAEDLFGMGIDVLTSGNHVWDKRELYDYLN
RQPRLLRPANYPEAPGSGLVTVRSRGGVECAVMNLQGRTYMPSTDCPFRKADSLLSQIDPAVKVKFVDFHAEVTSEKMAL
GWYLDGRVSAVVGTHTHVPTADTRILAGGTAYQTDCGMTGPYQSVIGVDTPTILQRFLTSLPVRMEAARHGAELHAVIVD
VDEATGKARAVRRHAINGD

Specific function: Unknown

COG id: COG1692

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005235 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27959; Mature: 27959

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILFIGDIFGSPGRRIVADHVEDIIQANSIDLAIANAENAAGGFGITPSIAEDLFGMGI
CEEEEEECCCCCCCCEEHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCE
DVLTSGNHVWDKRELYDYLNRQPRLLRPANYPEAPGSGLVTVRSRGGVECAVMNLQGRTY
EEEECCCCCCCHHHHHHHHCCCCCEECCCCCCCCCCCCEEEEECCCCEEEEEEEECCCEE
MPSTDCPFRKADSLLSQIDPAVKVKFVDFHAEVTSEKMALGWYLDGRVSAVVGTHTHVPT
CCCCCCCHHHHHHHHHHCCCCEEEEEEEEECHHCCCEEEEEEEECCEEEEEEECCCCCCC
ADTRILAGGTAYQTDCGMTGPYQSVIGVDTPTILQRFLTSLPVRMEAARHGAELHAVIVD
CCCEEEECCCEEECCCCCCCCCHHHCCCCCHHHHHHHHHHCCEEEHHHHCCCEEEEEEEE
VDEATGKARAVRRHAINGD
ECCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MNILFIGDIFGSPGRRIVADHVEDIIQANSIDLAIANAENAAGGFGITPSIAEDLFGMGI
CEEEEEECCCCCCCCEEHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCE
DVLTSGNHVWDKRELYDYLNRQPRLLRPANYPEAPGSGLVTVRSRGGVECAVMNLQGRTY
EEEECCCCCCCHHHHHHHHCCCCCEECCCCCCCCCCCCEEEEECCCCEEEEEEEECCCEE
MPSTDCPFRKADSLLSQIDPAVKVKFVDFHAEVTSEKMALGWYLDGRVSAVVGTHTHVPT
CCCCCCCHHHHHHHHHHCCCCEEEEEEEEECHHCCCEEEEEEEECCEEEEEEECCCCCCC
ADTRILAGGTAYQTDCGMTGPYQSVIGVDTPTILQRFLTSLPVRMEAARHGAELHAVIVD
CCCEEEECCCEEECCCCCCCCCHHHCCCCCHHHHHHHHHHCCEEEHHHHCCCEEEEEEEE
VDEATGKARAVRRHAINGD
ECCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]