| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is bcp [C]
Identifier: 116620241
GI number: 116620241
Start: 1375180
End: 1377363
Strand: Direct
Name: bcp [C]
Synonym: Acid_1118
Alternate gene names: 116620241
Gene position: 1375180-1377363 (Clockwise)
Preceding gene: 116620240
Following gene: 116620242
Centisome position: 13.8
GC content: 62.41
Gene sequence:
>2184_bases ATGTTCCGAATAGCAGTTCTGCTTGTCTGTGCCCTTCCGTTGTCCGCCTTTCAAGGAGCCGATTCCACGGTCTTCGCCAA GCTCGGCCACTCCCAGCACGGCGAGGCCTTTGACTCGGGTCCGCGTGAAAAACCCTGGCCGATCCCCGGCATCGGTGTGG CTCACTTCCCCATCACCACGAAGAATCCCGAAGTGCAGCAGTGGTTCGATCAGGGCAACGCTCTCTTGCATTCCTTCTGG GATTACGAGGCCGAGCGCTCCTTTCGCTGGTGCCTGAAGCTGGAGCCCGATAACGCCATGGCGTACTGGGGCCTGGCGCG CGCGTCCATGCTCCGCGGTTCCGGAGGACGCGACCGTCCGGCGGACATGATCCGCGAAGCTTTGAAACGCAAAGACCACG CAAGCCCGCGCGAGCGCCTCTACATCGACGCCCTCGCGGCGGAAATACTGCCCGACCCTTTGCGTGAAGGCAGCAAAGAG CGCGAGCGCGGCCGCAAGATCCTGGAGACGCTCTGCGTCCAGTATCCCGAGGATATGGAAGCCCGGGCGCTGCTCGCGCT CAACACTTTGGGCGACGATCGCTACGGCGCCGAACTCATGATCCGCGAGATCCTCGCCAAACAGCCCGACCATCCCGGAG CCCATCACTACCGCATTCACAACTGGGATTATCACGAGCCCGAGCAGGCCCTCGATAGCGCGCGCCGCTATGGCGAAATC GTCCCCGGCATCGGTCACGCGCTCCACATGCCCGGCCACATCTTCAGCATCGTCGGCATGTGGAACGAAGCTGCCATCTC GATGGATGCCGCCACGCGCCGCGAGAAGCAGTACATGAAAGAGCGGCTCACCTTCCCCTTCAACAACTGGAACTACGGCC ACAATCTCAACTACCTCTCCTACATCTACGAACAACTCGGAATGGCCCAGGCCGCGACATTCGCATCTCGCCAGCTCATC GACGCGCCGCTCGATCCGCAGGGTAACGACGACTCGCTCTTCAGCACGCATTCCTACGGCATCGCCGCGCTCGGCCGCGT GCTGCTGAAGTACGAGCGATGGGACGATCTCCTCAAGGAAGGCAACATTCCCTGGCGCGACATCTTTGCCGACAAAGTCA ATAAGGAGTACTTCGAAGCGCGCGCGCATTTCGGCAAGGGCGAGATCGGGAAGGCCGAGAAGAACCTGGCCGCGCACACC GCCCTGAAGAAGGATCTGGAGAAAAACAAGAGCGGACCGATCGCCGATGTCTACGAAATCCAGGCACAGGATCTGCGCGG GCGGCTGGCGCTGTCCCGCGGCGAAACGCTCGAAGGCCTGAAGTTTCTCTCCGAGGCCGCGCAGAAGGAATTCGACCTGC AGCGCAGCTACGCCGATCCGCCGGTCTACCCCGAAGCGCTCTACAACAGCCTCGGCGAAGCCTACCTCGCAACCAAAAGC CCGCTGCTCGCGGCGATTGCCTTTGAAAAGGCCCTCACCCTGACGCACAACGACCTGTTCGCGCTCTCCGGCCTGGTGCG TGCCTATGCGGCCGCCGGGGAAAAGGCCAAGGCCGAGGATGCCATGGCGCGCCTGCTGTTCGTGACCGCCGATGCCGATA AAGGCCTCGCGATCGTGAGCCGCGCGACCGCCACCGGTATCACCGCGACGCCGCGCGATTCGTCGCCGCGGCCGCAGCGC AATTACCTGCGCACTTCGCTCGAGCAGTTCGGCCCCAATCGTTGGGAGCCATACGCCGCGCCGCTGCTCGACGTGAAGGA TGCCTCCGGCAAGCGCGTTACGCTCGACGAGTATAAAGGGAAGAACGTGATCCTGGTCTTCTACCTCGGCGCGGAGTGTC CGCATTGCATGCGCCAGCTGCACGACATCGGCGGCAAGAAGTCCGAGTGGGAGCGCCTCAATACCGTGGTATTGGCAGTG AGCAGCACGCCGCCCGACAAAAATTCGAAGGCGCTCAAAGAGTTCGGCGACCTGCCGATTCGCCTGCTCTCCGACGATCA TCAGGCCAACGCCCACCGCTTCCATTCCTACGATGATTTCGAGGATGCGGAACTGCACAGCACCATCCTGATCGATCGCG AAGGCCGCGTCCGCTGGGCGCGGAATGGCGGAGATCCCTTCAGCGACATGGCATTCCTGGTGAAACAGGTGGAGGCCATG AAAACTCCGCTCGCACAACCCTAA
Upstream 100 bases:
>100_bases CGTCAACGTCCTCGGCAACTGCCTGGCCAGCGCCGTGGTGGCTCGCTGGGAAGGCTTCAAGGTCGGCTGACAACGACGAC TGTTTTATACTTGAGCGAGC
Downstream 100 bases:
>100_bases AGCCCGGCCCTCGAACCGCCGATCTCTGCCGCATGGAAGATACATTTACCGGCCGCGAGCGCTCGCGGCTCCGCCGTGCA CGAGAGAGCGGGTACCTGAA
Product: redoxin domain-containing protein
Products: Acceptor; H2O; oxidized thioredoxin [C]
Alternate protein names: Tetratricopeptide Domain Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Repeat Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Family; TPR Repeat Protein; TPR Domain Protein; Redoxin Domain-Containing Protein; Tetratricopeptide Region; TPR Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein
Number of amino acids: Translated: 727; Mature: 727
Protein sequence:
>727_residues MFRIAVLLVCALPLSAFQGADSTVFAKLGHSQHGEAFDSGPREKPWPIPGIGVAHFPITTKNPEVQQWFDQGNALLHSFW DYEAERSFRWCLKLEPDNAMAYWGLARASMLRGSGGRDRPADMIREALKRKDHASPRERLYIDALAAEILPDPLREGSKE RERGRKILETLCVQYPEDMEARALLALNTLGDDRYGAELMIREILAKQPDHPGAHHYRIHNWDYHEPEQALDSARRYGEI VPGIGHALHMPGHIFSIVGMWNEAAISMDAATRREKQYMKERLTFPFNNWNYGHNLNYLSYIYEQLGMAQAATFASRQLI DAPLDPQGNDDSLFSTHSYGIAALGRVLLKYERWDDLLKEGNIPWRDIFADKVNKEYFEARAHFGKGEIGKAEKNLAAHT ALKKDLEKNKSGPIADVYEIQAQDLRGRLALSRGETLEGLKFLSEAAQKEFDLQRSYADPPVYPEALYNSLGEAYLATKS PLLAAIAFEKALTLTHNDLFALSGLVRAYAAAGEKAKAEDAMARLLFVTADADKGLAIVSRATATGITATPRDSSPRPQR NYLRTSLEQFGPNRWEPYAAPLLDVKDASGKRVTLDEYKGKNVILVFYLGAECPHCMRQLHDIGGKKSEWERLNTVVLAV SSTPPDKNSKALKEFGDLPIRLLSDDHQANAHRFHSYDDFEDAELHSTILIDREGRVRWARNGGDPFSDMAFLVKQVEAM KTPLAQP
Sequences:
>Translated_727_residues MFRIAVLLVCALPLSAFQGADSTVFAKLGHSQHGEAFDSGPREKPWPIPGIGVAHFPITTKNPEVQQWFDQGNALLHSFW DYEAERSFRWCLKLEPDNAMAYWGLARASMLRGSGGRDRPADMIREALKRKDHASPRERLYIDALAAEILPDPLREGSKE RERGRKILETLCVQYPEDMEARALLALNTLGDDRYGAELMIREILAKQPDHPGAHHYRIHNWDYHEPEQALDSARRYGEI VPGIGHALHMPGHIFSIVGMWNEAAISMDAATRREKQYMKERLTFPFNNWNYGHNLNYLSYIYEQLGMAQAATFASRQLI DAPLDPQGNDDSLFSTHSYGIAALGRVLLKYERWDDLLKEGNIPWRDIFADKVNKEYFEARAHFGKGEIGKAEKNLAAHT ALKKDLEKNKSGPIADVYEIQAQDLRGRLALSRGETLEGLKFLSEAAQKEFDLQRSYADPPVYPEALYNSLGEAYLATKS PLLAAIAFEKALTLTHNDLFALSGLVRAYAAAGEKAKAEDAMARLLFVTADADKGLAIVSRATATGITATPRDSSPRPQR NYLRTSLEQFGPNRWEPYAAPLLDVKDASGKRVTLDEYKGKNVILVFYLGAECPHCMRQLHDIGGKKSEWERLNTVVLAV SSTPPDKNSKALKEFGDLPIRLLSDDHQANAHRFHSYDDFEDAELHSTILIDREGRVRWARNGGDPFSDMAFLVKQVEAM KTPLAQP >Mature_727_residues MFRIAVLLVCALPLSAFQGADSTVFAKLGHSQHGEAFDSGPREKPWPIPGIGVAHFPITTKNPEVQQWFDQGNALLHSFW DYEAERSFRWCLKLEPDNAMAYWGLARASMLRGSGGRDRPADMIREALKRKDHASPRERLYIDALAAEILPDPLREGSKE RERGRKILETLCVQYPEDMEARALLALNTLGDDRYGAELMIREILAKQPDHPGAHHYRIHNWDYHEPEQALDSARRYGEI VPGIGHALHMPGHIFSIVGMWNEAAISMDAATRREKQYMKERLTFPFNNWNYGHNLNYLSYIYEQLGMAQAATFASRQLI DAPLDPQGNDDSLFSTHSYGIAALGRVLLKYERWDDLLKEGNIPWRDIFADKVNKEYFEARAHFGKGEIGKAEKNLAAHT ALKKDLEKNKSGPIADVYEIQAQDLRGRLALSRGETLEGLKFLSEAAQKEFDLQRSYADPPVYPEALYNSLGEAYLATKS PLLAAIAFEKALTLTHNDLFALSGLVRAYAAAGEKAKAEDAMARLLFVTADADKGLAIVSRATATGITATPRDSSPRPQR NYLRTSLEQFGPNRWEPYAAPLLDVKDASGKRVTLDEYKGKNVILVFYLGAECPHCMRQLHDIGGKKSEWERLNTVVLAV SSTPPDKNSKALKEFGDLPIRLLSDDHQANAHRFHSYDDFEDAELHSTILIDREGRVRWARNGGDPFSDMAFLVKQVEAM KTPLAQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81726; Mature: 81726
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRIAVLLVCALPLSAFQGADSTVFAKLGHSQHGEAFDSGPREKPWPIPGIGVAHFPITT CHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCEEECCCCC KNPEVQQWFDQGNALLHSFWDYEAERSFRWCLKLEPDNAMAYWGLARASMLRGSGGRDRP CCCHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCH ADMIREALKRKDHASPRERLYIDALAAEILPDPLREGSKERERGRKILETLCVQYPEDME HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCC ARALLALNTLGDDRYGAELMIREILAKQPDHPGAHHYRIHNWDYHEPEQALDSARRYGEI HHEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCC VPGIGHALHMPGHIFSIVGMWNEAAISMDAATRREKQYMKERLTFPFNNWNYGHNLNYLS CCCCCHHHCCCHHHHHHHHHHCHHHEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH YIYEQLGMAQAATFASRQLIDAPLDPQGNDDSLFSTHSYGIAALGRVLLKYERWDDLLKE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHC GNIPWRDIFADKVNKEYFEARAHFGKGEIGKAEKNLAAHTALKKDLEKNKSGPIADVYEI CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH QAQDLRGRLALSRGETLEGLKFLSEAAQKEFDLQRSYADPPVYPEALYNSLGEAYLATKS HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC PLLAAIAFEKALTLTHNDLFALSGLVRAYAAAGEKAKAEDAMARLLFVTADADKGLAIVS HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHEEEEEEEECCCCCEEEEE RATATGITATPRDSSPRPQRNYLRTSLEQFGPNRWEPYAAPLLDVKDASGKRVTLDEYKG HHHHCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEEEHHCCCC KNVILVFYLGAECPHCMRQLHDIGGKKSEWERLNTVVLAVSSTPPDKNSKALKEFGDLPI CCEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHCEEEEEEECCCCCCCHHHHHHHCCCCE RLLSDDHQANAHRFHSYDDFEDAELHSTILIDREGRVRWARNGGDPFSDMAFLVKQVEAM EEECCCCCCCHHHCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHH KTPLAQP HCCCCCC >Mature Secondary Structure MFRIAVLLVCALPLSAFQGADSTVFAKLGHSQHGEAFDSGPREKPWPIPGIGVAHFPITT CHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCEEECCCCC KNPEVQQWFDQGNALLHSFWDYEAERSFRWCLKLEPDNAMAYWGLARASMLRGSGGRDRP CCCHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCH ADMIREALKRKDHASPRERLYIDALAAEILPDPLREGSKERERGRKILETLCVQYPEDME HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCC ARALLALNTLGDDRYGAELMIREILAKQPDHPGAHHYRIHNWDYHEPEQALDSARRYGEI HHEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCC VPGIGHALHMPGHIFSIVGMWNEAAISMDAATRREKQYMKERLTFPFNNWNYGHNLNYLS CCCCCHHHCCCHHHHHHHHHHCHHHEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH YIYEQLGMAQAATFASRQLIDAPLDPQGNDDSLFSTHSYGIAALGRVLLKYERWDDLLKE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHC GNIPWRDIFADKVNKEYFEARAHFGKGEIGKAEKNLAAHTALKKDLEKNKSGPIADVYEI CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH QAQDLRGRLALSRGETLEGLKFLSEAAQKEFDLQRSYADPPVYPEALYNSLGEAYLATKS HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC PLLAAIAFEKALTLTHNDLFALSGLVRAYAAAGEKAKAEDAMARLLFVTADADKGLAIVS HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHEEEEEEEECCCCCEEEEE RATATGITATPRDSSPRPQRNYLRTSLEQFGPNRWEPYAAPLLDVKDASGKRVTLDEYKG HHHHCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEEEHHCCCC KNVILVFYLGAECPHCMRQLHDIGGKKSEWERLNTVVLAVSSTPPDKNSKALKEFGDLPI CCEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHCEEEEEEECCCCCCCHHHHHHHCCCCE RLLSDDHQANAHRFHSYDDFEDAELHSTILIDREGRVRWARNGGDPFSDMAFLVKQVEAM EEECCCCCCCHHHCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHH KTPLAQP HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: reduced acceptor; H2O2; reduced thioredoxin [C]
Specific reaction: reduced acceptor + H2O2 = Acceptor + H2O reduced thioredoxin + H2O2 = oxidized thioredoxin + H2O [C]
General reaction: Oxidoreductases; Acting on a peroxide as acceptor; Peroxidase [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA