| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620205
Identifier: 116620205
GI number: 116620205
Start: 1330297
End: 1331181
Strand: Reverse
Name: 116620205
Synonym: Acid_1078
Alternate gene names: NA
Gene position: 1331181-1330297 (Counterclockwise)
Preceding gene: 116620206
Following gene: 116620203
Centisome position: 13.36
GC content: 60.56
Gene sequence:
>885_bases ATGAGTAACTGCTCCAGACGTAACTTCCTGAAGGCCAGCTTGGCCGCGGGAGTACTTGCGGGCACCGGCGGCCTGCCCCT TCGGGCAGCGCGCGGCGCCGCCACCGATTGGGTGACGCTTGGGAAATCCGGCGTCAAAGTGACGCGGCTCGCATTCGGAA CCGGGTCTATCAGCGGCCGGGTACAACGCGAATTGGGGCAGGACGAATTCACCCGCCAGGTGCGCTACGCGTACGACCAC GGCATCCGCTTCTTCGAAACCGCCGAAAGCTATGGCGACATGCACCGCATGCTGGGCATCGCGCTCAAGGGAATCCCGCG CGATTCGTACCGCCTGATGACCAAAGTGACCACCAGCAACGGCGTGGACCCGCAACAGAAAATCGACGAACTGCGCAAGC TTGCCAATACCGATTACTTCGATATCGCGCTGCTGCATTATCAGCACGTAGGCACGTGGCCCACGGATACCGTGCGCTGG CAGGACGGGATCCTCGAAGCCAAACACAAGAAGGCCGTCATCGGGCAGGGTGCGTCGGTGCACGGGCTGCCGGCCTTGCG CCGCGTACCGGGCAATCAGTGGCTGGAAGTTGCCATGATCCGCATGAACCATAAAGGCGTCAAGATGGACGCGGAAGACT ACAACACCAACGGCACAGGCAACGTGAGCGAAGTGGTCAGCCACGTCAAACAGGTCCACACCGAAGGCATGGGGATCATC AGCATGAAGCTGATCGGCGAAGGCGCGTTCACGACTCGCGAAGACCGCCAGGCCGCGATGAAGTTCGCATTCAACAATGC CGGTGTCGATTCGGTCACGGTCGGCTTCAAGAATACGAAGGAAATCGACGAAGCCATCGAGAACCTGAATCTCGCGCTGG CGTAA
Upstream 100 bases:
>100_bases TTCCGGGCTGCCCGTCACACCGCGGGCAGCCCTTTCCGCAGAGCCCCCACCGCTCGCATCCGGACTCATGATAGGATGAT GGCCAATCAGAGGAGGATGT
Downstream 100 bases:
>100_bases CCGCTACCGGACTAGGTCAATGCTCGCGATCGTGCGCGAGCCGGTTCGCCACTGATTGACCACCTTGCCTTTGGCATCGA CCTCGATGATGCGACGGCCC
Product: oxidoreductase
Products: NA
Alternate protein names: Oxidoreductase; Oxidoreductase Aldo/Keto Reductase Family; Aldo/Keto Reductase Family Oxidoreductase
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MSNCSRRNFLKASLAAGVLAGTGGLPLRAARGAATDWVTLGKSGVKVTRLAFGTGSISGRVQRELGQDEFTRQVRYAYDH GIRFFETAESYGDMHRMLGIALKGIPRDSYRLMTKVTTSNGVDPQQKIDELRKLANTDYFDIALLHYQHVGTWPTDTVRW QDGILEAKHKKAVIGQGASVHGLPALRRVPGNQWLEVAMIRMNHKGVKMDAEDYNTNGTGNVSEVVSHVKQVHTEGMGII SMKLIGEGAFTTREDRQAAMKFAFNNAGVDSVTVGFKNTKEIDEAIENLNLALA
Sequences:
>Translated_294_residues MSNCSRRNFLKASLAAGVLAGTGGLPLRAARGAATDWVTLGKSGVKVTRLAFGTGSISGRVQRELGQDEFTRQVRYAYDH GIRFFETAESYGDMHRMLGIALKGIPRDSYRLMTKVTTSNGVDPQQKIDELRKLANTDYFDIALLHYQHVGTWPTDTVRW QDGILEAKHKKAVIGQGASVHGLPALRRVPGNQWLEVAMIRMNHKGVKMDAEDYNTNGTGNVSEVVSHVKQVHTEGMGII SMKLIGEGAFTTREDRQAAMKFAFNNAGVDSVTVGFKNTKEIDEAIENLNLALA >Mature_293_residues SNCSRRNFLKASLAAGVLAGTGGLPLRAARGAATDWVTLGKSGVKVTRLAFGTGSISGRVQRELGQDEFTRQVRYAYDHG IRFFETAESYGDMHRMLGIALKGIPRDSYRLMTKVTTSNGVDPQQKIDELRKLANTDYFDIALLHYQHVGTWPTDTVRWQ DGILEAKHKKAVIGQGASVHGLPALRRVPGNQWLEVAMIRMNHKGVKMDAEDYNTNGTGNVSEVVSHVKQVHTEGMGIIS MKLIGEGAFTTREDRQAAMKFAFNNAGVDSVTVGFKNTKEIDEAIENLNLALA
Specific function: Unknown
COG id: COG1453
COG function: function code R; Predicted oxidoreductases of the aldo/keto reductase family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32265; Mature: 32134
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNCSRRNFLKASLAAGVLAGTGGLPLRAARGAATDWVTLGKSGVKVTRLAFGTGSISGR CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEECCCCCEEEEEEECCCCCCHH VQRELGQDEFTRQVRYAYDHGIRFFETAESYGDMHRMLGIALKGIPRDSYRLMTKVTTSN HHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCC GVDPQQKIDELRKLANTDYFDIALLHYQHVGTWPTDTVRWQDGILEAKHKKAVIGQGASV CCCHHHHHHHHHHHHCCCCCEEEEEEHHHCCCCCCCCEECCCCHHHHHHHHHHHCCCCCC HGLPALRRVPGNQWLEVAMIRMNHKGVKMDAEDYNTNGTGNVSEVVSHVKQVHTEGMGII CCCHHHHHCCCCHHEEEEEEEECCCCCEECHHHCCCCCCCCHHHHHHHHHHHHHCCCCEE SMKLIGEGAFTTREDRQAAMKFAFNNAGVDSVTVGFKNTKEIDEAIENLNLALA EEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCEECC >Mature Secondary Structure SNCSRRNFLKASLAAGVLAGTGGLPLRAARGAATDWVTLGKSGVKVTRLAFGTGSISGR CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEECCCCCEEEEEEECCCCCCHH VQRELGQDEFTRQVRYAYDHGIRFFETAESYGDMHRMLGIALKGIPRDSYRLMTKVTTSN HHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCC GVDPQQKIDELRKLANTDYFDIALLHYQHVGTWPTDTVRWQDGILEAKHKKAVIGQGASV CCCHHHHHHHHHHHHCCCCCEEEEEEHHHCCCCCCCCEECCCCHHHHHHHHHHHCCCCCC HGLPALRRVPGNQWLEVAMIRMNHKGVKMDAEDYNTNGTGNVSEVVSHVKQVHTEGMGII CCCHHHHHCCCCHHEEEEEEEECCCCCEECHHHCCCCCCCCHHHHHHHHHHHHHCCCCEE SMKLIGEGAFTTREDRQAAMKFAFNNAGVDSVTVGFKNTKEIDEAIENLNLALA EEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA