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The map label for this gene is gatC

Identifier: 116620201

GI number: 116620201

Start: 1327464

End: 1327763

Strand: Reverse

Name: gatC

Synonym: Acid_1074

Alternate gene names: 116620201

Gene position: 1327763-1327464 (Counterclockwise)

Preceding gene: 116620202

Following gene: 116620200

Centisome position: 13.32

GC content: 59.67

Gene sequence:

>300_bases
GTGAAGATCACCGAAAAGGAAGTTCGCTACGTAGCCGGCCTGGCCAACCTCAATCTCACCGAGCAGGAGATCGCGCGCAT
GCAGGTCGATCTCGATGGCATTTTGGAGCACATGGCGCGGCTTAACGAAATCGACACCGAAGGCGTCGCGCCCATGTCGC
AGGTGCTCTTCGAAGCCGAAGAGACCGCCACCTTGCGCCCCGATTCGCCCATTCCCCCGCTCGGCAATCAGGCCGCGATG
GCCAATGCCCCGCAATCGGGCGCGGGCTATTTCAAAGTTCCCAAAGTCATCGAACGTTAA

Upstream 100 bases:

>100_bases
GCGTCGCCATGCCCGCCCTGTTCGCCGCCGACGATGCCGATGCCATCGCCGATCCCGTGCTGCGCGATATCTACAAGCAA
TCCCGAAAAAGAGCACAAGC

Downstream 100 bases:

>100_bases
AAGACGCGCATGGATATCCCATCCCTGACCATCGACCGCGTGAGGCAAGGACTGTTCTCGCGCGAGTTCAGCGCCACCGA
ACTCGCCGCAGAGGCATTGC

Product: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MKITEKEVRYVAGLANLNLTEQEIARMQVDLDGILEHMARLNEIDTEGVAPMSQVLFEAEETATLRPDSPIPPLGNQAAM
ANAPQSGAGYFKVPKVIER

Sequences:

>Translated_99_residues
MKITEKEVRYVAGLANLNLTEQEIARMQVDLDGILEHMARLNEIDTEGVAPMSQVLFEAEETATLRPDSPIPPLGNQAAM
ANAPQSGAGYFKVPKVIER
>Mature_99_residues
MKITEKEVRYVAGLANLNLTEQEIARMQVDLDGILEHMARLNEIDTEGVAPMSQVLFEAEETATLRPDSPIPPLGNQAAM
ANAPQSGAGYFKVPKVIER

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_SOLUE (Q02A54)

Other databases:

- EMBL:   CP000473
- RefSeq:   YP_822357.1
- ProteinModelPortal:   Q02A54
- SMR:   Q02A54
- STRING:   Q02A54
- GeneID:   4430759
- GenomeReviews:   CP000473_GR
- KEGG:   sus:Acid_1074
- NMPDR:   fig|234267.9.peg.1014
- eggNOG:   COG0721
- HOGENOM:   HBG586403
- OMA:   VTAVEPM
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 10851; Mature: 10851

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITEKEVRYVAGLANLNLTEQEIARMQVDLDGILEHMARLNEIDTEGVAPMSQVLFEAE
CCCCHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
ETATLRPDSPIPPLGNQAAMANAPQSGAGYFKVPKVIER
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHCC
>Mature Secondary Structure
MKITEKEVRYVAGLANLNLTEQEIARMQVDLDGILEHMARLNEIDTEGVAPMSQVLFEAE
CCCCHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
ETATLRPDSPIPPLGNQAAMANAPQSGAGYFKVPKVIER
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA