| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116620193
Identifier: 116620193
GI number: 116620193
Start: 1318728
End: 1319648
Strand: Direct
Name: 116620193
Synonym: Acid_1066
Alternate gene names: NA
Gene position: 1318728-1319648 (Clockwise)
Preceding gene: 116620192
Following gene: 116620195
Centisome position: 13.23
GC content: 64.17
Gene sequence:
>921_bases GTGACCCCTAAATTCCGAGCGTGGCTGCTGGTGGTGATCGTCTCCGCGCTCTGTGGCCTCTCGCTTGGCGGCGTGATCTG GTACCGCTCGCGCGCTTTGACTCCGGCCGCGCTGCTGAGGCGCCTGCCGACCGACGACGCCGTGATCGTCTACATCGATT TCGCCAAGCTTCGCACCGGCGGCATCCTGCAATTGCTCGACGGATCGAAGGTGGGCGAAGACCCTGAATACCAGGCGTTC GTGCGCAAGACCGATTTCGACTACAAGCAGGACCTGGAGGCGGCGCTGCTGGCCTTCTCGCCGCAGGGAAAGTACATGCT GCTTAAGGGCCGCTTCGATTGGAAGAGCCTCTCGGCGTACGTCCGGGGGACGGATGGAGCGTGCAACAACTCCTTCTGCC GCATGGTGGGGAGCTCGCCGGAGCGGCGGATTTCCTTCTTCCCGGTGCAATCGAACCTGATGGCGCTGGCGGTGAGCCCG GAGGAAGACGCGGCGCATCGCATGAGCGAGATCGATTCGCGGCCGGAACAGGAAGTGCCGGATGCGCCGATCTGGCTGTC GATTCCGCCGTCGGTGGTGAATTCCGGACAGAATTTGCCGGCCGGTACGCAGATGTTCGCTCGGAGTTTGAAACGCGCGC AGGCGGTGACGCTCGCGATCGCGCCGGAGGCCGACCGGTTCGCGGCCAGGCTCAACGTGCGCTGCGCATCCGCCGGCGAT GCCACGGAACTGGCAGGGGAATTGACCAAGACCACATCACTGCTGCGGGAACTGATTACGAAGGAACACCAGACTCCAAA TCCCGCCGACCTGAGCGGCTTCCTGACCTCCGGCACCTTCCGCAGCGAAGGCTCGCGCGTGCAGGGCTACTGGCCCATGC AGCGTGCGTTGATCGAGAACCTGCTCGGCGGGGGGAATTAA
Upstream 100 bases:
>100_bases CTGCCGGCGTTCCAGGCGATGATGGACGAGCTTCAACCCTACATTCGTCTTTGGAGTGAAGCGCGCACCAGCGACCTTGC GGCTGTGTGATACTCGATTC
Downstream 100 bases:
>100_bases AGAGAGGACTTTTTATCCGCGCATAAGAAAATTGCCTTAGCCTTTCAGGTCGCGGAAGGCCTGTTCGATCTCCTGTTTGG CGGCGGGTGAGGGGACGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MTPKFRAWLLVVIVSALCGLSLGGVIWYRSRALTPAALLRRLPTDDAVIVYIDFAKLRTGGILQLLDGSKVGEDPEYQAF VRKTDFDYKQDLEAALLAFSPQGKYMLLKGRFDWKSLSAYVRGTDGACNNSFCRMVGSSPERRISFFPVQSNLMALAVSP EEDAAHRMSEIDSRPEQEVPDAPIWLSIPPSVVNSGQNLPAGTQMFARSLKRAQAVTLAIAPEADRFAARLNVRCASAGD ATELAGELTKTTSLLRELITKEHQTPNPADLSGFLTSGTFRSEGSRVQGYWPMQRALIENLLGGGN
Sequences:
>Translated_306_residues MTPKFRAWLLVVIVSALCGLSLGGVIWYRSRALTPAALLRRLPTDDAVIVYIDFAKLRTGGILQLLDGSKVGEDPEYQAF VRKTDFDYKQDLEAALLAFSPQGKYMLLKGRFDWKSLSAYVRGTDGACNNSFCRMVGSSPERRISFFPVQSNLMALAVSP EEDAAHRMSEIDSRPEQEVPDAPIWLSIPPSVVNSGQNLPAGTQMFARSLKRAQAVTLAIAPEADRFAARLNVRCASAGD ATELAGELTKTTSLLRELITKEHQTPNPADLSGFLTSGTFRSEGSRVQGYWPMQRALIENLLGGGN >Mature_305_residues TPKFRAWLLVVIVSALCGLSLGGVIWYRSRALTPAALLRRLPTDDAVIVYIDFAKLRTGGILQLLDGSKVGEDPEYQAFV RKTDFDYKQDLEAALLAFSPQGKYMLLKGRFDWKSLSAYVRGTDGACNNSFCRMVGSSPERRISFFPVQSNLMALAVSPE EDAAHRMSEIDSRPEQEVPDAPIWLSIPPSVVNSGQNLPAGTQMFARSLKRAQAVTLAIAPEADRFAARLNVRCASAGDA TELAGELTKTTSLLRELITKEHQTPNPADLSGFLTSGTFRSEGSRVQGYWPMQRALIENLLGGGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33501; Mature: 33369
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPKFRAWLLVVIVSALCGLSLGGVIWYRSRALTPAALLRRLPTDDAVIVYIDFAKLRTG CCCCHHHHHHHHHHHHHHCCCCCCHHEECCCCCCHHHHHHHCCCCCEEEEEEEHHHCCCC GILQLLDGSKVGEDPEYQAFVRKTDFDYKQDLEAALLAFSPQGKYMLLKGRFDWKSLSAY CEEEEECCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHEECCCCCEEEEECCCCHHHHHHE VRGTDGACNNSFCRMVGSSPERRISFFPVQSNLMALAVSPEEDAAHRMSEIDSRPEQEVP EECCCCCCCCHHHHHCCCCCCCEEEEEEECCCEEEEEECCCHHHHHHHHHHCCCCCCCCC DAPIWLSIPPSVVNSGQNLPAGTQMFARSLKRAQAVTLAIAPEADRFAARLNVRCASAGD CCCEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHEEEEEECCCHHHHHHHEEEEEECCCC ATELAGELTKTTSLLRELITKEHQTPNPADLSGFLTSGTFRSEGSRVQGYWPMQRALIEN HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCEECCCCCEEECCCHHHHHHHHH LLGGGN HHCCCC >Mature Secondary Structure TPKFRAWLLVVIVSALCGLSLGGVIWYRSRALTPAALLRRLPTDDAVIVYIDFAKLRTG CCCHHHHHHHHHHHHHHCCCCCCHHEECCCCCCHHHHHHHCCCCCEEEEEEEHHHCCCC GILQLLDGSKVGEDPEYQAFVRKTDFDYKQDLEAALLAFSPQGKYMLLKGRFDWKSLSAY CEEEEECCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHEECCCCCEEEEECCCCHHHHHHE VRGTDGACNNSFCRMVGSSPERRISFFPVQSNLMALAVSPEEDAAHRMSEIDSRPEQEVP EECCCCCCCCHHHHHCCCCCCCEEEEEEECCCEEEEEECCCHHHHHHHHHHCCCCCCCCC DAPIWLSIPPSVVNSGQNLPAGTQMFARSLKRAQAVTLAIAPEADRFAARLNVRCASAGD CCCEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHEEEEEECCCHHHHHHHEEEEEECCCC ATELAGELTKTTSLLRELITKEHQTPNPADLSGFLTSGTFRSEGSRVQGYWPMQRALIEN HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCEECCCCCEEECCCHHHHHHHHH LLGGGN HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA