| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620148
Identifier: 116620148
GI number: 116620148
Start: 1266782
End: 1267126
Strand: Direct
Name: 116620148
Synonym: Acid_1021
Alternate gene names: NA
Gene position: 1266782-1267126 (Clockwise)
Preceding gene: 116620147
Following gene: 116620149
Centisome position: 12.71
GC content: 60.29
Gene sequence:
>345_bases ATGAGTCTTATGCGCGGCGGCGACGACGAAAAATTGGACGCACTGTTCCGGGCGTACAACCAGGCCTGCGGATCTCCCGA GGCCGGTCAGAATTTCATGCCGAACCTCTGGGCTCGGATCGAATCGCGTCAGCGATTCACCTTCTCCTTCCGTCGCATGG CCACCGCCATGGCGACAGCGGCAGTGGCGCTGTCCCTCGCGCTAGGCGTGTACATGTCGATCCCGCGGTCAAACTCCGAT TACAGCCAGACTTATGTCGAGGCGCTCGCCGATTTCAATACGGTCGATGCCCCCGATATCGTCGGGCCGGTCAAGATGGA CCTTTCCGAGCGGCCGGTAAAGTAA
Upstream 100 bases:
>100_bases TTAAGGTCCGTTTGTTCCGTGCCCGGCAAAGGGTGTTAAAAGCCTTCGGGGCGGCAGGAAAAAAAGAGGAAGCCGGTTAA ACCGGTGGAGTAGAGTTATT
Downstream 100 bases:
>100_bases AGGGGCATCGATGCCTAAATACAAGCTCTCCGCGGTTCTGTCGCTGCTCCTCGTCTTCCTCAGCGGTTCTGTGCTGGGTG CCGTTGCGTACCGCCTGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MSLMRGGDDEKLDALFRAYNQACGSPEAGQNFMPNLWARIESRQRFTFSFRRMATAMATAAVALSLALGVYMSIPRSNSD YSQTYVEALADFNTVDAPDIVGPVKMDLSERPVK
Sequences:
>Translated_114_residues MSLMRGGDDEKLDALFRAYNQACGSPEAGQNFMPNLWARIESRQRFTFSFRRMATAMATAAVALSLALGVYMSIPRSNSD YSQTYVEALADFNTVDAPDIVGPVKMDLSERPVK >Mature_113_residues SLMRGGDDEKLDALFRAYNQACGSPEAGQNFMPNLWARIESRQRFTFSFRRMATAMATAAVALSLALGVYMSIPRSNSDY SQTYVEALADFNTVDAPDIVGPVKMDLSERPVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12620; Mature: 12489
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLMRGGDDEKLDALFRAYNQACGSPEAGQNFMPNLWARIESRQRFTFSFRRMATAMATA CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AVALSLALGVYMSIPRSNSDYSQTYVEALADFNTVDAPDIVGPVKMDLSERPVK HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SLMRGGDDEKLDALFRAYNQACGSPEAGQNFMPNLWARIESRQRFTFSFRRMATAMATA CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AVALSLALGVYMSIPRSNSDYSQTYVEALADFNTVDAPDIVGPVKMDLSERPVK HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA