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The map label for this gene is 116620106

Identifier: 116620106

GI number: 116620106

Start: 1217472

End: 1219082

Strand: Direct

Name: 116620106

Synonym: Acid_0979

Alternate gene names: NA

Gene position: 1217472-1219082 (Clockwise)

Preceding gene: 116620104

Following gene: 116620107

Centisome position: 12.22

GC content: 63.13

Gene sequence:

>1611_bases
ATGCCGGTGCTCCTCGCCTCGCAACCCCGGCAGGCCGATGTTGTCGTGTACGGCGCGACGTCGTCCGGTATCGCCGCCGC
CGTGCAGGTGGTACGGCTCGGCAAGACGGCGATCATCGTGGATCCCGGCACGCATCTTGGCGGACTCACCACCGGAGGGC
TCGGCTGGACGGACATCGGCAACAAACAGGTGATCGGCGGCATCGCGCTCGAGTTTTACCGCCGAGTCAAGCAGCATTAC
GACCAACCCGCATCGTGGAAATTTCAGCCGCGCGAGAGCTATTACAAGCTCCGCCACGCCGAAATTAACAGCGCCGATTC
CGCCATGTGGACCTTCGAGCCCCACGTTGCCACCGACATTTATCGCGAGATGCTTGCCCAATATAAGATCCCTGTCGTGA
TGCAGGCGCGGCTCGATCTGCGGCCCGGCAAGGGCGTGGTGATGGATGGCGGGCTTATCGCCGCCATTGTGCTGGAGGAC
GGGCGCCGCTTTACGGGACGCATGTTCATCGACGCCACCTATGAAGGCGACCTGATGGCGAAGACCGGGGTGCGATACAC
AACGGGCCGCGAAGCCAATGCCACGTACGGCGAAAAGTACAATGGCGTCGAGGCGGCACACCGCCATCAGCACCAGTTTC
CCGACGGCCTGCGCATCTCTCCGTACGTTAAACCCGGCGACCCCGCGAGCGGGCTGCTTCCGGGCATAGACGCGACAGGT
CCCGGGGTGGAAGGTTCGGGCGACCGCCGCATTCAGACCTATTGCTTCCGCCTGTGCATGACGAATGCCACGGATAACCG
CCTGCCGATCGAGAAGCCGGCGCAGTACAACGAGCGTGATTTCGAGCTGCTGCTGCGCTATGCTGAATCGGGCCGGTATC
ATCCGCCCGCCACCAAATGGGACCCGCTGCCCAACGCCAAGACCGACACCAATAATCACGGCGCCGTTTCGACGGATTTC
ATCGGGATGAATTGGGAGTACTCCGAGGGCGATTACGCGACACGCGCCCGCATCGTTCGCGAGCACGAGATCTTCACGCG
GGGGTACCTGTGGGCGCTGCAGAACAGCCCGCGCGTGCCCGAAGCCCTTCGCGAGTATTATCGCCAGTGGGGTTGGCCCA
AGGATGAATTCCTGGAGAACGATCACTTCCCGACGCAACTCTACATCCGCGAGGCGCGCCGGATGGTGGCGGACGTCGTG
ATGACGGAGCACCACGTCACCGCTCGCGAGACGGCGCGCGATTCCGTCGGCATGGCCGCCTACGGAATGGACTCGCACAA
CGTGCAGCGGTACATCACGCCGGAGGGCTTCGTGCGCAACGAAGGCAACGTGCAGGTGGGCGGCTTCGCGCCGTATCCCA
TCAGCTATCGCGCGATCGTGCCGCGCGCCGGCGAAGCAGCCAATTTGTTCGTGCCGGTTTGCCTCTCCGCATCCCACATC
GCCTACGGTTCGATCTGCATGGAGCCTGTGTTCATGATCCTGGGGCAATCTTCCGCTATAGCCGCGGTGCTTGCGATGGA
AGCCAACACCGACGTGCAGTCCGTCGATTACGGCGAACTCCGCAAGCGGTTGCTCGCGGCCGGCCAAATTCTGGATTCGC
CGAAGCGGTAG

Upstream 100 bases:

>100_bases
TCTTCGCTGTAGTCGAGCTGAGGGGGCAGATCGCGCTCCGTCACACTCACAGTTTACCGCTCAATGCGACAATGCCCTCA
TGCGACGCCTTCTCTTCCTT

Downstream 100 bases:

>100_bases
GTTAACTTTCAGGTGATATGCCGTTCGCGTTCCAGGGCCTATTATGGAGAGCATGAAGTACGCTCTCGCAGCGCTATTCG
CCGCCGCAGGCATGCTCTGG

Product: putative xanthan lyase

Products: NA

Alternate protein names: Secreted Protein- Xanthan Lyase ; Xanthan Lyase Protein; Secreted Protein Putative Xanthan Lyase Related Protein

Number of amino acids: Translated: 536; Mature: 535

Protein sequence:

>536_residues
MPVLLASQPRQADVVVYGATSSGIAAAVQVVRLGKTAIIVDPGTHLGGLTTGGLGWTDIGNKQVIGGIALEFYRRVKQHY
DQPASWKFQPRESYYKLRHAEINSADSAMWTFEPHVATDIYREMLAQYKIPVVMQARLDLRPGKGVVMDGGLIAAIVLED
GRRFTGRMFIDATYEGDLMAKTGVRYTTGREANATYGEKYNGVEAAHRHQHQFPDGLRISPYVKPGDPASGLLPGIDATG
PGVEGSGDRRIQTYCFRLCMTNATDNRLPIEKPAQYNERDFELLLRYAESGRYHPPATKWDPLPNAKTDTNNHGAVSTDF
IGMNWEYSEGDYATRARIVREHEIFTRGYLWALQNSPRVPEALREYYRQWGWPKDEFLENDHFPTQLYIREARRMVADVV
MTEHHVTARETARDSVGMAAYGMDSHNVQRYITPEGFVRNEGNVQVGGFAPYPISYRAIVPRAGEAANLFVPVCLSASHI
AYGSICMEPVFMILGQSSAIAAVLAMEANTDVQSVDYGELRKRLLAAGQILDSPKR

Sequences:

>Translated_536_residues
MPVLLASQPRQADVVVYGATSSGIAAAVQVVRLGKTAIIVDPGTHLGGLTTGGLGWTDIGNKQVIGGIALEFYRRVKQHY
DQPASWKFQPRESYYKLRHAEINSADSAMWTFEPHVATDIYREMLAQYKIPVVMQARLDLRPGKGVVMDGGLIAAIVLED
GRRFTGRMFIDATYEGDLMAKTGVRYTTGREANATYGEKYNGVEAAHRHQHQFPDGLRISPYVKPGDPASGLLPGIDATG
PGVEGSGDRRIQTYCFRLCMTNATDNRLPIEKPAQYNERDFELLLRYAESGRYHPPATKWDPLPNAKTDTNNHGAVSTDF
IGMNWEYSEGDYATRARIVREHEIFTRGYLWALQNSPRVPEALREYYRQWGWPKDEFLENDHFPTQLYIREARRMVADVV
MTEHHVTARETARDSVGMAAYGMDSHNVQRYITPEGFVRNEGNVQVGGFAPYPISYRAIVPRAGEAANLFVPVCLSASHI
AYGSICMEPVFMILGQSSAIAAVLAMEANTDVQSVDYGELRKRLLAAGQILDSPKR
>Mature_535_residues
PVLLASQPRQADVVVYGATSSGIAAAVQVVRLGKTAIIVDPGTHLGGLTTGGLGWTDIGNKQVIGGIALEFYRRVKQHYD
QPASWKFQPRESYYKLRHAEINSADSAMWTFEPHVATDIYREMLAQYKIPVVMQARLDLRPGKGVVMDGGLIAAIVLEDG
RRFTGRMFIDATYEGDLMAKTGVRYTTGREANATYGEKYNGVEAAHRHQHQFPDGLRISPYVKPGDPASGLLPGIDATGP
GVEGSGDRRIQTYCFRLCMTNATDNRLPIEKPAQYNERDFELLLRYAESGRYHPPATKWDPLPNAKTDTNNHGAVSTDFI
GMNWEYSEGDYATRARIVREHEIFTRGYLWALQNSPRVPEALREYYRQWGWPKDEFLENDHFPTQLYIREARRMVADVVM
TEHHVTARETARDSVGMAAYGMDSHNVQRYITPEGFVRNEGNVQVGGFAPYPISYRAIVPRAGEAANLFVPVCLSASHIA
YGSICMEPVFMILGQSSAIAAVLAMEANTDVQSVDYGELRKRLLAAGQILDSPKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59715; Mature: 59584

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVLLASQPRQADVVVYGATSSGIAAAVQVVRLGKTAIIVDPGTHLGGLTTGGLGWTDIG
CCEEECCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCEEECCCCCCCCC
NKQVIGGIALEFYRRVKQHYDQPASWKFQPRESYYKLRHAEINSADSAMWTFEPHVATDI
CCEEHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHCCCCCCCCEEEEECCHHHHHH
YREMLAQYKIPVVMQARLDLRPGKGVVMDGGLIAAIVLEDGRRFTGRMFIDATYEGDLMA
HHHHHHHCCCCEEEEEEECCCCCCCEEECCCEEEEEEEECCCEEEEEEEEEEEECCCEEE
KTGVRYTTGREANATYGEKYNGVEAAHRHQHQFPDGLRISPYVKPGDPASGLLPGIDATG
CCCCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEECCEECCCCCCCCCCCCCCCCC
PGVEGSGDRRIQTYCFRLCMTNATDNRLPIEKPAQYNERDFELLLRYAESGRYHPPATKW
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
DPLPNAKTDTNNHGAVSTDFIGMNWEYSEGDYATRARIVREHEIFTRGYLWALQNSPRVP
CCCCCCCCCCCCCCCEEEEEEECCEEECCCCHHHHHHHHHHHHHHHCEEEEEECCCCCCH
EALREYYRQWGWPKDEFLENDHFPTQLYIREARRMVADVVMTEHHVTARETARDSVGMAA
HHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEE
YGMDSHNVQRYITPEGFVRNEGNVQVGGFAPYPISYRAIVPRAGEAANLFVPVCLSASHI
ECCCCCCCEEEECCCCEEECCCCEEECCCCCCCCEEEEECCCCCCCCCEEEEEEECCCHH
AYGSICMEPVFMILGQSSAIAAVLAMEANTDVQSVDYGELRKRLLAAGQILDSPKR
HHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PVLLASQPRQADVVVYGATSSGIAAAVQVVRLGKTAIIVDPGTHLGGLTTGGLGWTDIG
CEEECCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCEEECCCCCCCCC
NKQVIGGIALEFYRRVKQHYDQPASWKFQPRESYYKLRHAEINSADSAMWTFEPHVATDI
CCEEHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHCCCCCCCCEEEEECCHHHHHH
YREMLAQYKIPVVMQARLDLRPGKGVVMDGGLIAAIVLEDGRRFTGRMFIDATYEGDLMA
HHHHHHHCCCCEEEEEEECCCCCCCEEECCCEEEEEEEECCCEEEEEEEEEEEECCCEEE
KTGVRYTTGREANATYGEKYNGVEAAHRHQHQFPDGLRISPYVKPGDPASGLLPGIDATG
CCCCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEECCEECCCCCCCCCCCCCCCCC
PGVEGSGDRRIQTYCFRLCMTNATDNRLPIEKPAQYNERDFELLLRYAESGRYHPPATKW
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
DPLPNAKTDTNNHGAVSTDFIGMNWEYSEGDYATRARIVREHEIFTRGYLWALQNSPRVP
CCCCCCCCCCCCCCCEEEEEEECCEEECCCCHHHHHHHHHHHHHHHCEEEEEECCCCCCH
EALREYYRQWGWPKDEFLENDHFPTQLYIREARRMVADVVMTEHHVTARETARDSVGMAA
HHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEE
YGMDSHNVQRYITPEGFVRNEGNVQVGGFAPYPISYRAIVPRAGEAANLFVPVCLSASHI
ECCCCCCCEEEECCCCEEECCCCEEECCCCCCCCEEEEECCCCCCCCCEEEEEEECCCHH
AYGSICMEPVFMILGQSSAIAAVLAMEANTDVQSVDYGELRKRLLAAGQILDSPKR
HHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA