| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116620090
Identifier: 116620090
GI number: 116620090
Start: 1200472
End: 1202250
Strand: Reverse
Name: 116620090
Synonym: Acid_0962
Alternate gene names: NA
Gene position: 1202250-1200472 (Counterclockwise)
Preceding gene: 116620091
Following gene: 116620089
Centisome position: 12.06
GC content: 63.52
Gene sequence:
>1779_bases ATGAGAAGATCCCGCCGACTTGCCCGTTTCGTTCTGTTCTCTTTCGTACTAGCGGCTTCCGCCGTGATGATGCAGGCTCA GGAAGAGAAAGAGGCTCCCCGGAAAAGAAACCCGGAAAATAAGTCCGAGCCGAGGCAGCAGCGCACGGAACGGAAACAGG AGCAGCCTCAATCGCAGCCCCAGCAACAGCGCACCGAGCGTCCGCCGGAGCGTCAGCATACCCCCCCGGCAGTTCAGCCG CAGTCCCAACAGCAACAGGCGCCCCAGCACACGGCGGCGCCTCCCGTGCAGCGCACCCCTCCGGTGAACCAACCGGCGCA ACAGCAGCCGCAGCGTCAGGACAGACCCGCCCAGCCGCAGGTATACCAGGGACAGCCCAATAACCAGCCGGGACGGACCT TCGGCAACCCGCCGGGCGGACAGCCGGGTCGTACCTTTGGCGGCAGCCAGCCGAATCGAGTATCGCCTTCCATGGAAGCG CGCCCGGTGAATCCGGCTCCGCGGACTTATACCACTCGCGGCGGCGACGTAATCCATCGCGATGCAGCCGGCGAAGTCCG GCGGGTCCAAATGCCAAACGGCACCGTGGTCTACCACCCGCCCAACGCGCCGCGCCGTGTGGAAGTGGTGCGCCCGGGAG GTCGCGTCGTGGTCGCCGGCGCGCCCGGGCACGGCTACGTGCAGCGCCAGGTGGTGGTCAGTAACACCACCATTATCAAG CGCACCTATATCTATAACGGCGTACCGCAGGCCAGGATCTACCGGCCGCGCATGTACAATGGCGTTTCGCTGGTGGTCTA CACACCGGTTCGCTACTACCGGCCCGCTTTCTACGCCTATGCCTACAACCCCTGGCCGCGCCCCATCGTCTTTGGATGGG GTTGGGCCGGCAGCCCCTGGTATGGCTATTACGGTGGGTATTTCACCCCGTATCCGGTCTATGCCAGCCCTTCGCTGTGG CTGACCGACTACCTGATCGCCGCCACCCTGGAGAACGCCTACCAGGAGCGTATGGCGGCGCGCGCCGCGGCAGCGAACAG CTATGCGGCTAACGGCGGTCCATCAGCCCCGCTGACCCCCGAGGTGAAACAGGCTATCGCCGATGAGGTCCACCGCCAGA TCGATCAGGAACGGTCGCAGCAATCTTCGAATGCCATGAACACGCAGGACCCTAACATCTTTGCGGATAACTCTCCCCAT GTGTTCGTGGCCAGCACACCCATCATGGTCAGTTCGAACTACGGCGATTGCGCCATAGGCGAAGGCGACGTTCTGCAAAT GAATCAGCCGCCGCTCTTGAATTCCCCGACCGCGGAGGTCATCGTGCTCGCTAGCCGCGGACAGGATTGCCGCAAGGGCA GCCGCGTGAATGTCGGCCTCCAGGATCTCCAGGAGATGCACAACCAGATGCTGGCTACCATCGACCGTGGCATGGGCGAA CTGCAAAGCAAACAGGGTCAGGGCGGAGTGCCCCCCGCGCCTCAAGGCAGCACCGGCACCATCGATTCCCCGTACGCGCG GGAAGCGCAGCCGGATGCCAACGTGGCCGGCGAATTGACCACGGTGAGCCAGGAGGCGGACCGCGCCGAGCAGCAGGCCA TCGGCCAGGCCGGCGATGCGCAGTCTCCTCCAACCCTCACGCTTGGACTTTCCATCGACGACGTAAAAGCGATCCAGGGC GAGCCGGAGAAGGTGGTGGACCTTGGCGCCAGGAAGATTTATGTCTACAAGGACCTGAAGATCACCTTCCAGGACGGCAA AGTCATCGATATCCAGTAA
Upstream 100 bases:
>100_bases TTAAACCTCCTGAAGATCTACCCTGGAAATGCGTGGAAGGTTACGTTTTCCGCGAAGGGCTTCCGTGTCCATAAGCAGAA GCCCTGATGGAGCTGACTGC
Downstream 100 bases:
>100_bases TTCTGAACGCGTTCAAATAATCCTTGACAGGCACGCCCTCTCGGGCGCAAACTGATTTTTGAACGCGTTCGGAATTCTAT GGTACGGCTCGAAGAACGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 592; Mature: 592
Protein sequence:
>592_residues MRRSRRLARFVLFSFVLAASAVMMQAQEEKEAPRKRNPENKSEPRQQRTERKQEQPQSQPQQQRTERPPERQHTPPAVQP QSQQQQAPQHTAAPPVQRTPPVNQPAQQQPQRQDRPAQPQVYQGQPNNQPGRTFGNPPGGQPGRTFGGSQPNRVSPSMEA RPVNPAPRTYTTRGGDVIHRDAAGEVRRVQMPNGTVVYHPPNAPRRVEVVRPGGRVVVAGAPGHGYVQRQVVVSNTTIIK RTYIYNGVPQARIYRPRMYNGVSLVVYTPVRYYRPAFYAYAYNPWPRPIVFGWGWAGSPWYGYYGGYFTPYPVYASPSLW LTDYLIAATLENAYQERMAARAAAANSYAANGGPSAPLTPEVKQAIADEVHRQIDQERSQQSSNAMNTQDPNIFADNSPH VFVASTPIMVSSNYGDCAIGEGDVLQMNQPPLLNSPTAEVIVLASRGQDCRKGSRVNVGLQDLQEMHNQMLATIDRGMGE LQSKQGQGGVPPAPQGSTGTIDSPYAREAQPDANVAGELTTVSQEADRAEQQAIGQAGDAQSPPTLTLGLSIDDVKAIQG EPEKVVDLGARKIYVYKDLKITFQDGKVIDIQ
Sequences:
>Translated_592_residues MRRSRRLARFVLFSFVLAASAVMMQAQEEKEAPRKRNPENKSEPRQQRTERKQEQPQSQPQQQRTERPPERQHTPPAVQP QSQQQQAPQHTAAPPVQRTPPVNQPAQQQPQRQDRPAQPQVYQGQPNNQPGRTFGNPPGGQPGRTFGGSQPNRVSPSMEA RPVNPAPRTYTTRGGDVIHRDAAGEVRRVQMPNGTVVYHPPNAPRRVEVVRPGGRVVVAGAPGHGYVQRQVVVSNTTIIK RTYIYNGVPQARIYRPRMYNGVSLVVYTPVRYYRPAFYAYAYNPWPRPIVFGWGWAGSPWYGYYGGYFTPYPVYASPSLW LTDYLIAATLENAYQERMAARAAAANSYAANGGPSAPLTPEVKQAIADEVHRQIDQERSQQSSNAMNTQDPNIFADNSPH VFVASTPIMVSSNYGDCAIGEGDVLQMNQPPLLNSPTAEVIVLASRGQDCRKGSRVNVGLQDLQEMHNQMLATIDRGMGE LQSKQGQGGVPPAPQGSTGTIDSPYAREAQPDANVAGELTTVSQEADRAEQQAIGQAGDAQSPPTLTLGLSIDDVKAIQG EPEKVVDLGARKIYVYKDLKITFQDGKVIDIQ >Mature_592_residues MRRSRRLARFVLFSFVLAASAVMMQAQEEKEAPRKRNPENKSEPRQQRTERKQEQPQSQPQQQRTERPPERQHTPPAVQP QSQQQQAPQHTAAPPVQRTPPVNQPAQQQPQRQDRPAQPQVYQGQPNNQPGRTFGNPPGGQPGRTFGGSQPNRVSPSMEA RPVNPAPRTYTTRGGDVIHRDAAGEVRRVQMPNGTVVYHPPNAPRRVEVVRPGGRVVVAGAPGHGYVQRQVVVSNTTIIK RTYIYNGVPQARIYRPRMYNGVSLVVYTPVRYYRPAFYAYAYNPWPRPIVFGWGWAGSPWYGYYGGYFTPYPVYASPSLW LTDYLIAATLENAYQERMAARAAAANSYAANGGPSAPLTPEVKQAIADEVHRQIDQERSQQSSNAMNTQDPNIFADNSPH VFVASTPIMVSSNYGDCAIGEGDVLQMNQPPLLNSPTAEVIVLASRGQDCRKGSRVNVGLQDLQEMHNQMLATIDRGMGE LQSKQGQGGVPPAPQGSTGTIDSPYAREAQPDANVAGELTTVSQEADRAEQQAIGQAGDAQSPPTLTLGLSIDDVKAIQG EPEKVVDLGARKIYVYKDLKITFQDGKVIDIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65253; Mature: 65253
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSRRLARFVLFSFVLAASAVMMQAQEEKEAPRKRNPENKSEPRQQRTERKQEQPQSQP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHCCCCCH QQQRTERPPERQHTPPAVQPQSQQQQAPQHTAAPPVQRTPPVNQPAQQQPQRQDRPAQPQ HHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHCCHHHCCCCCCC VYQGQPNNQPGRTFGNPPGGQPGRTFGGSQPNRVSPSMEARPVNPAPRTYTTRGGDVIHR EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEE DAAGEVRRVQMPNGTVVYHPPNAPRRVEVVRPGGRVVVAGAPGHGYVQRQVVVSNTTIIK CCCCCEEEEECCCCEEEECCCCCCCEEEEECCCCEEEEEECCCCCCEEEEEEECCCEEEE RTYIYNGVPQARIYRPRMYNGVSLVVYTPVRYYRPAFYAYAYNPWPRPIVFGWGWAGSPW EEEEECCCCHHEEECCCCCCCEEEEEECCHHHHCCEEEEEEECCCCCCEEEECCCCCCCC YGYYGGYFTPYPVYASPSLWLTDYLIAATLENAYQERMAARAAAANSYAANGGPSAPLTP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH EVKQAIADEVHRQIDQERSQQSSNAMNTQDPNIFADNSPHVFVASTPIMVSSNYGDCAIG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEEECCEEEECCCCCEECC EGDVLQMNQPPLLNSPTAEVIVLASRGQDCRKGSRVNVGLQDLQEMHNQMLATIDRGMGE CCCEEECCCCCCCCCCCCEEEEEECCCCHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHH LQSKQGQGGVPPAPQGSTGTIDSPYAREAQPDANVAGELTTVSQEADRAEQQAIGQAGDA HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCC QSPPTLTLGLSIDDVKAIQGEPEKVVDLGARKIYVYKDLKITFQDGKVIDIQ CCCCEEEEECCHHHHHHHCCCCHHHHHCCCEEEEEEEEEEEEEECCEEEEEC >Mature Secondary Structure MRRSRRLARFVLFSFVLAASAVMMQAQEEKEAPRKRNPENKSEPRQQRTERKQEQPQSQP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHCCCCCH QQQRTERPPERQHTPPAVQPQSQQQQAPQHTAAPPVQRTPPVNQPAQQQPQRQDRPAQPQ HHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHCCHHHCCCCCCC VYQGQPNNQPGRTFGNPPGGQPGRTFGGSQPNRVSPSMEARPVNPAPRTYTTRGGDVIHR EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEE DAAGEVRRVQMPNGTVVYHPPNAPRRVEVVRPGGRVVVAGAPGHGYVQRQVVVSNTTIIK CCCCCEEEEECCCCEEEECCCCCCCEEEEECCCCEEEEEECCCCCCEEEEEEECCCEEEE RTYIYNGVPQARIYRPRMYNGVSLVVYTPVRYYRPAFYAYAYNPWPRPIVFGWGWAGSPW EEEEECCCCHHEEECCCCCCCEEEEEECCHHHHCCEEEEEEECCCCCCEEEECCCCCCCC YGYYGGYFTPYPVYASPSLWLTDYLIAATLENAYQERMAARAAAANSYAANGGPSAPLTP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH EVKQAIADEVHRQIDQERSQQSSNAMNTQDPNIFADNSPHVFVASTPIMVSSNYGDCAIG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEEECCEEEECCCCCEECC EGDVLQMNQPPLLNSPTAEVIVLASRGQDCRKGSRVNVGLQDLQEMHNQMLATIDRGMGE CCCEEECCCCCCCCCCCCEEEEEECCCCHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHH LQSKQGQGGVPPAPQGSTGTIDSPYAREAQPDANVAGELTTVSQEADRAEQQAIGQAGDA HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCC QSPPTLTLGLSIDDVKAIQGEPEKVVDLGARKIYVYKDLKITFQDGKVIDIQ CCCCEEEEECCHHHHHHHCCCCHHHHHCCCEEEEEEEEEEEEEECCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA