| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620089
Identifier: 116620089
GI number: 116620089
Start: 1199911
End: 1200393
Strand: Reverse
Name: 116620089
Synonym: Acid_0961
Alternate gene names: NA
Gene position: 1200393-1199911 (Counterclockwise)
Preceding gene: 116620090
Following gene: 116620088
Centisome position: 12.05
GC content: 62.53
Gene sequence:
>483_bases ATGGTACGGCTCGAAGAACGCACCCTGATTCGCGCGCCCATCGACCGGTGTTTCGATCTTGCGCGCAGCGTGGAAGTGCA TCTCGCGGGAAATTCCCATTGCGGCGAATCCGCGGTCGCTGCCGCGGGCATCACCTCCGGACTCATCGGCCTGTCCCAGC GCGTGACGTGGCGTGCAAAGCATTTCTGGATCTGGCAGACGCTCACCAGCGAGATCACCGCGATGGAGCCGCCGGCCTAT TTCCAGGACGTCATGATCCGCGGCGCGTTCCGGTCCATGCGCCACGACCACTTCTTCCGCGCTGTAAGTGCCGGCGAGAC GGAGATGTCCGACATCTTCTGGTTTTCGGCTCCAGTGCCCATCCTCGGCCACATCGTCGAAATCCTGGTTCTACGCCGCT ACATGCAGTCGCTGCTGCGCGAGCGCAATGCGGTCATCCGCGAATTCGCCGAATCGGAAGCGTGGCGGAAGGTCCTGCTA TGA
Upstream 100 bases:
>100_bases CAAAGTCATCGATATCCAGTAATTCTGAACGCGTTCAAATAATCCTTGACAGGCACGCCCTCTCGGGCGCAAACTGATTT TTGAACGCGTTCGGAATTCT
Downstream 100 bases:
>100_bases AGATCGTGATCCCCGGCGGCAGCGGACAGGTAGGGCAGATCCTGACGCGTCACTTCCACGCCCAGGGCCACGAAGTCACG GTGCTGAGGCGCGATCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MVRLEERTLIRAPIDRCFDLARSVEVHLAGNSHCGESAVAAAGITSGLIGLSQRVTWRAKHFWIWQTLTSEITAMEPPAY FQDVMIRGAFRSMRHDHFFRAVSAGETEMSDIFWFSAPVPILGHIVEILVLRRYMQSLLRERNAVIREFAESEAWRKVLL
Sequences:
>Translated_160_residues MVRLEERTLIRAPIDRCFDLARSVEVHLAGNSHCGESAVAAAGITSGLIGLSQRVTWRAKHFWIWQTLTSEITAMEPPAY FQDVMIRGAFRSMRHDHFFRAVSAGETEMSDIFWFSAPVPILGHIVEILVLRRYMQSLLRERNAVIREFAESEAWRKVLL >Mature_160_residues MVRLEERTLIRAPIDRCFDLARSVEVHLAGNSHCGESAVAAAGITSGLIGLSQRVTWRAKHFWIWQTLTSEITAMEPPAY FQDVMIRGAFRSMRHDHFFRAVSAGETEMSDIFWFSAPVPILGHIVEILVLRRYMQSLLRERNAVIREFAESEAWRKVLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18358; Mature: 18358
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRLEERTLIRAPIDRCFDLARSVEVHLAGNSHCGESAVAAAGITSGLIGLSQRVTWRAK CCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HFWIWQTLTSEITAMEPPAYFQDVMIRGAFRSMRHDHFFRAVSAGETEMSDIFWFSAPVP HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEECCCCHH ILGHIVEILVLRRYMQSLLRERNAVIREFAESEAWRKVLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVRLEERTLIRAPIDRCFDLARSVEVHLAGNSHCGESAVAAAGITSGLIGLSQRVTWRAK CCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HFWIWQTLTSEITAMEPPAYFQDVMIRGAFRSMRHDHFFRAVSAGETEMSDIFWFSAPVP HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEECCCCHH ILGHIVEILVLRRYMQSLLRERNAVIREFAESEAWRKVLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA