| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620058
Identifier: 116620058
GI number: 116620058
Start: 1168111
End: 1169472
Strand: Direct
Name: 116620058
Synonym: Acid_0930
Alternate gene names: NA
Gene position: 1168111-1169472 (Clockwise)
Preceding gene: 116620057
Following gene: 116620059
Centisome position: 11.72
GC content: 63.22
Gene sequence:
>1362_bases ATGAAACCGCTACAAATGAATCATGATCAACTGAAATCGCGGCGTTACTTCCTGCGCGGAGCCGGCGTGGCGCTCGCCCT CCCCTGGATGGAATCGATGCAGCTCCTGCGCGCGCAGGATGGCGCGCCCGCCGTTTCCAAGGAGCCGCCCCTCCGCTTTG CCTGCATCTACTTTTCCAATGGCGTCGATCCCGCCCACTGGTCGGCCAAGGGCGAAGGCGCCGCCATGGAGTTCGGCCAG GCCGGCCAGCCGCTGACCGCCGTTCGCGAAGACCTCGTCTTCATCCGCGGCCTCTATCATCAGACCGCCCTCACCTCCAC CAGCCCGCATCTCGGCCGCATGAACATGCTCTCCGGCGCCACCGTCAGCCTCGACCCCAACAACATTCGCGTCGGGACTT CGATGGACCAGGTGATGGCGCGGCAGATCGGCAGCCGCACTCCCGTACCCAGCCTCGCCCTCAGCATCGAGCCCAATGAG CTCCGTCTCGAAGACGGCCTCTCCATGCTCTACGGCTCCTGCATCTCCTGGTCGTCGCCCACCAAGCCCACCGCGAAGGA AATCTACCCCGCGCGTGTCTTCGATCAACTCGTCGGCGACGGCAAAGGCCGCAAGCTCGACCGCAGCATCTTAGACGCGG TACTCCAGGACACCCACGACCTGCAGCCCAAAATCAGCACCGGCGATCGCAAGAAGCTCGACGAATACCTCGAATCCGTG CGCGACATCGAAAATCGCATCGACCGCGCCTCCAAAGAGGAGCGGCTCGAAGGCTGGCGCCCCACCATCTCCAAGCCCAA CATGCCGCGCCCGTCGGATGAGATCCCGCAGAACGTCCCCGACCACATGCGCCTGATGATGGATCTCACGGTCCTGGCCT TCCAGATGGATAAGACCCGCATCGTGACCCTGATGTTGAATAACGATCTCTCGCAAATGAACTTCAAGTTCATCCCTGGC GTCCGCGGCGCCCTGCACCTGGACCTCACTCACAACGGCAAAGCTCCCGAACTGAAGGCCATGTACCTCAAGACCAACCA GTTCCACATGGAGCAGTTCGTCTACCTGGTGAAGCGCCTCAAGGATATCGATGAGGGCGGCCGCTCACTGCTCCAGAGCT CCACGCTGATGCTCGCGTCCAACCTCTACGATGGCGATGCCCACGGCGCCGACCAGATGCCCGTCGTGCTCGCCGGGCAG GCCGGAGGCGCCCTCAAGACCGGCCGCGTCCTCGATTACCTCGACAAAGGCAACGACAACCGCCGCGCCTGCAGCCTCTA TCTCTCACTCATGGACCGCATGGGCGTCCGCCTCGACCGCTTCGGCGACACCGACCAGCGCCTGCAAGCCCTCTTCGCTT AA
Upstream 100 bases:
>100_bases GTAAGCAGTTCCGCAATCGTCTGGGCCGTGAAGACGCCCCGCCCCCGACAGTTAAGACCGCGGCGGTCGCGCAAAATTCT ACCGGGAGAGCAGGTGCAAG
Downstream 100 bases:
>100_bases CACTCCGAGCCAACGAGCCCAAAGTGCCCTCGATCTCCGGCATTGCCCCAAACGGCTTGCCGCCCTGTATTACACTGCTC TTGTTTGCTCGCAGGCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MKPLQMNHDQLKSRRYFLRGAGVALALPWMESMQLLRAQDGAPAVSKEPPLRFACIYFSNGVDPAHWSAKGEGAAMEFGQ AGQPLTAVREDLVFIRGLYHQTALTSTSPHLGRMNMLSGATVSLDPNNIRVGTSMDQVMARQIGSRTPVPSLALSIEPNE LRLEDGLSMLYGSCISWSSPTKPTAKEIYPARVFDQLVGDGKGRKLDRSILDAVLQDTHDLQPKISTGDRKKLDEYLESV RDIENRIDRASKEERLEGWRPTISKPNMPRPSDEIPQNVPDHMRLMMDLTVLAFQMDKTRIVTLMLNNDLSQMNFKFIPG VRGALHLDLTHNGKAPELKAMYLKTNQFHMEQFVYLVKRLKDIDEGGRSLLQSSTLMLASNLYDGDAHGADQMPVVLAGQ AGGALKTGRVLDYLDKGNDNRRACSLYLSLMDRMGVRLDRFGDTDQRLQALFA
Sequences:
>Translated_453_residues MKPLQMNHDQLKSRRYFLRGAGVALALPWMESMQLLRAQDGAPAVSKEPPLRFACIYFSNGVDPAHWSAKGEGAAMEFGQ AGQPLTAVREDLVFIRGLYHQTALTSTSPHLGRMNMLSGATVSLDPNNIRVGTSMDQVMARQIGSRTPVPSLALSIEPNE LRLEDGLSMLYGSCISWSSPTKPTAKEIYPARVFDQLVGDGKGRKLDRSILDAVLQDTHDLQPKISTGDRKKLDEYLESV RDIENRIDRASKEERLEGWRPTISKPNMPRPSDEIPQNVPDHMRLMMDLTVLAFQMDKTRIVTLMLNNDLSQMNFKFIPG VRGALHLDLTHNGKAPELKAMYLKTNQFHMEQFVYLVKRLKDIDEGGRSLLQSSTLMLASNLYDGDAHGADQMPVVLAGQ AGGALKTGRVLDYLDKGNDNRRACSLYLSLMDRMGVRLDRFGDTDQRLQALFA >Mature_453_residues MKPLQMNHDQLKSRRYFLRGAGVALALPWMESMQLLRAQDGAPAVSKEPPLRFACIYFSNGVDPAHWSAKGEGAAMEFGQ AGQPLTAVREDLVFIRGLYHQTALTSTSPHLGRMNMLSGATVSLDPNNIRVGTSMDQVMARQIGSRTPVPSLALSIEPNE LRLEDGLSMLYGSCISWSSPTKPTAKEIYPARVFDQLVGDGKGRKLDRSILDAVLQDTHDLQPKISTGDRKKLDEYLESV RDIENRIDRASKEERLEGWRPTISKPNMPRPSDEIPQNVPDHMRLMMDLTVLAFQMDKTRIVTLMLNNDLSQMNFKFIPG VRGALHLDLTHNGKAPELKAMYLKTNQFHMEQFVYLVKRLKDIDEGGRSLLQSSTLMLASNLYDGDAHGADQMPVVLAGQ AGGALKTGRVLDYLDKGNDNRRACSLYLSLMDRMGVRLDRFGDTDQRLQALFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50587; Mature: 50587
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLQMNHDQLKSRRYFLRGAGVALALPWMESMQLLRAQDGAPAVSKEPPLRFACIYFSN CCCCCCCHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEC GVDPAHWSAKGEGAAMEFGQAGQPLTAVREDLVFIRGLYHQTALTSTSPHLGRMNMLSGA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCC TVSLDPNNIRVGTSMDQVMARQIGSRTPVPSLALSIEPNELRLEDGLSMLYGSCISWSSP EEEECCCCEEECCCHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCC TKPTAKEIYPARVFDQLVGDGKGRKLDRSILDAVLQDTHDLQPKISTGDRKKLDEYLESV CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH RDIENRIDRASKEERLEGWRPTISKPNMPRPSDEIPQNVPDHMRLMMDLTVLAFQMDKTR HHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCCE IVTLMLNNDLSQMNFKFIPGVRGALHLDLTHNGKAPELKAMYLKTNQFHMEQFVYLVKRL EEEEEECCCHHHCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCHHHHHHHHHHHHHH KDIDEGGRSLLQSSTLMLASNLYDGDAHGADQMPVVLAGQAGGALKTGRVLDYLDKGNDN HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCC RRACSLYLSLMDRMGVRLDRFGDTDQRLQALFA HHHHHHHHHHHHHHCCEECCCCCHHHHHHHHCC >Mature Secondary Structure MKPLQMNHDQLKSRRYFLRGAGVALALPWMESMQLLRAQDGAPAVSKEPPLRFACIYFSN CCCCCCCHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEC GVDPAHWSAKGEGAAMEFGQAGQPLTAVREDLVFIRGLYHQTALTSTSPHLGRMNMLSGA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCC TVSLDPNNIRVGTSMDQVMARQIGSRTPVPSLALSIEPNELRLEDGLSMLYGSCISWSSP EEEECCCCEEECCCHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCC TKPTAKEIYPARVFDQLVGDGKGRKLDRSILDAVLQDTHDLQPKISTGDRKKLDEYLESV CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH RDIENRIDRASKEERLEGWRPTISKPNMPRPSDEIPQNVPDHMRLMMDLTVLAFQMDKTR HHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCCE IVTLMLNNDLSQMNFKFIPGVRGALHLDLTHNGKAPELKAMYLKTNQFHMEQFVYLVKRL EEEEEECCCHHHCCEEECCCCCCEEEEEEECCCCCCCEEEEEEECCHHHHHHHHHHHHHH KDIDEGGRSLLQSSTLMLASNLYDGDAHGADQMPVVLAGQAGGALKTGRVLDYLDKGNDN HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCC RRACSLYLSLMDRMGVRLDRFGDTDQRLQALFA HHHHHHHHHHHHHHCCEECCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA