| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620059
Identifier: 116620059
GI number: 116620059
Start: 1169930
End: 1171072
Strand: Direct
Name: 116620059
Synonym: Acid_0931
Alternate gene names: NA
Gene position: 1169930-1171072 (Clockwise)
Preceding gene: 116620058
Following gene: 116620062
Centisome position: 11.74
GC content: 64.65
Gene sequence:
>1143_bases ATGCGTGTAATTCTCTCCATCGCGCTCGCTCTGCTCACCGCCTGCGCGGTGCGCCAGTCACCTCTTGGCCCGTGGCGCCT GCAGCCCGCACGCGACGGACTCATGCTCCTCCCGCCGCGCTCTAGCACCTCCACTCTCGAACTCAAGAACGTCCGCTCCG TGCATACCCGCGACACCGGCTGCGAAGTCTCCGTTCCCCAAATCCAACTCGCGTGGAAAGGCCGCACCGCCCGCGTAACC CTCGACGAGCGCGCCGTAGCCGCCGCCCCGGAGATCGCCCTCAAAGGTCCCCAGGCCGCCACCGGCGAACAGGTGCGCGA CCTCTCCTGGTGGCCTGACTTCCGCCAGCAGCTTGTGCGCCGCGAGCAGCAGGGCTGCCTCGCCCACGGGGAGGCCGAAC TCCTCGCCGGCCGCATCGTCCAGAATCTGCCGCTTCCTCCCATGCTCGCCTACAAGCTCCGCTATGGCGACTATCTGATG GATGGCTATCTCGACCTGGGCCCGAAGTTTGCGTTGAAATCGGTGTCGCCGCTGCTCAAGCCCGGCATCGAGAAATACCA TGCTCTTGCCGATGTGGCTGGATATGAGACCGCGTACTACGACGTGCAGCAGGGTGGGGACGGAAGTTTGAAAATCGCGC TGCGCAGCGTAGATCAGCTGGTGGGCCGGATCAGCACGAAGAAGCCCCGGCCCACCGGGAGTCCGTTGCGCGTTGCGAAC TCCGCCCGCTATGTCCGCCTTTTTTTTCGCACTTGGCGCATTTCCGGCGACTATCGGATCGCCCTGCTGGCCACGCGCGA TGTTGGCCTGATGGACGCGATGAGCAGCGAGTTCGAGAAGGACCCCGAGCGCTTCTGCCGCGAGACCAATCCAGCGCGCG CGACCTGCCTCTCGGTGCCGATGGAGATGATGCTGACCGCCGAGATGAGACTGCGCGTCAATGGCAAACCCGCGTATGTG CCGGTCGGAGGCAACGTGGCGGAAGTGCTACGCACCGCCGGAGTGCGCCAGCCGCAGACGGTGATTCAGAGCCTTCAAGT GTTACGCCCTTACGAAGGCGCGCTCGCGCCGGTCGAATTCGATCGAACGCGTTCCGACATTCTCAACCTCACGCTGATCG GCGGCGAAGAGATCCGCTGGTAG
Upstream 100 bases:
>100_bases GGGCAGCCAGTCCTGGCTGCGCGCCGGCTTTCAGCCGGCGCTTCTGCGGAGACGATCCACGCCCGCCAATTACGAGCGCT CTCCGTTACCATATGCTCAG
Downstream 100 bases:
>100_bases CGCCACAAATCGATGGGGCAGACGGTGTCGCCTGCCCCATCAAACTTAAAACGTCAGCCGGAATGCAAGCTGCACATACC GCGGATCGCGGGCCGATGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MRVILSIALALLTACAVRQSPLGPWRLQPARDGLMLLPPRSSTSTLELKNVRSVHTRDTGCEVSVPQIQLAWKGRTARVT LDERAVAAAPEIALKGPQAATGEQVRDLSWWPDFRQQLVRREQQGCLAHGEAELLAGRIVQNLPLPPMLAYKLRYGDYLM DGYLDLGPKFALKSVSPLLKPGIEKYHALADVAGYETAYYDVQQGGDGSLKIALRSVDQLVGRISTKKPRPTGSPLRVAN SARYVRLFFRTWRISGDYRIALLATRDVGLMDAMSSEFEKDPERFCRETNPARATCLSVPMEMMLTAEMRLRVNGKPAYV PVGGNVAEVLRTAGVRQPQTVIQSLQVLRPYEGALAPVEFDRTRSDILNLTLIGGEEIRW
Sequences:
>Translated_380_residues MRVILSIALALLTACAVRQSPLGPWRLQPARDGLMLLPPRSSTSTLELKNVRSVHTRDTGCEVSVPQIQLAWKGRTARVT LDERAVAAAPEIALKGPQAATGEQVRDLSWWPDFRQQLVRREQQGCLAHGEAELLAGRIVQNLPLPPMLAYKLRYGDYLM DGYLDLGPKFALKSVSPLLKPGIEKYHALADVAGYETAYYDVQQGGDGSLKIALRSVDQLVGRISTKKPRPTGSPLRVAN SARYVRLFFRTWRISGDYRIALLATRDVGLMDAMSSEFEKDPERFCRETNPARATCLSVPMEMMLTAEMRLRVNGKPAYV PVGGNVAEVLRTAGVRQPQTVIQSLQVLRPYEGALAPVEFDRTRSDILNLTLIGGEEIRW >Mature_380_residues MRVILSIALALLTACAVRQSPLGPWRLQPARDGLMLLPPRSSTSTLELKNVRSVHTRDTGCEVSVPQIQLAWKGRTARVT LDERAVAAAPEIALKGPQAATGEQVRDLSWWPDFRQQLVRREQQGCLAHGEAELLAGRIVQNLPLPPMLAYKLRYGDYLM DGYLDLGPKFALKSVSPLLKPGIEKYHALADVAGYETAYYDVQQGGDGSLKIALRSVDQLVGRISTKKPRPTGSPLRVAN SARYVRLFFRTWRISGDYRIALLATRDVGLMDAMSSEFEKDPERFCRETNPARATCLSVPMEMMLTAEMRLRVNGKPAYV PVGGNVAEVLRTAGVRQPQTVIQSLQVLRPYEGALAPVEFDRTRSDILNLTLIGGEEIRW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42190; Mature: 42190
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVILSIALALLTACAVRQSPLGPWRLQPARDGLMLLPPRSSTSTLELKNVRSVHTRDTG CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCEEEHHCCHHHHCCCCC CEVSVPQIQLAWKGRTARVTLDERAVAAAPEIALKGPQAATGEQVRDLSWWPDFRQQLVR CEEECCEEEEEECCCEEEEEECCCHHHCCCCCEECCCCCCCCCHHHCCCCCHHHHHHHHH REQQGCLAHGEAELLAGRIVQNLPLPPMLAYKLRYGDYLMDGYLDLGPKFALKSVSPLLK HHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHEECCCCCHHHHHHCCCCHHHHHHHCHHHH PGIEKYHALADVAGYETAYYDVQQGGDGSLKIALRSVDQLVGRISTKKPRPTGSPLRVAN HHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCEEECC SARYVRLFFRTWRISGDYRIALLATRDVGLMDAMSSEFEKDPERFCRETNPARATCLSVP CCHHEEEEEEHEEECCCEEEEEEEECCCCHHHHHHHHHCCCHHHHHHCCCCHHHHHHHCC MEMMLTAEMRLRVNGKPAYVPVGGNVAEVLRTAGVRQPQTVIQSLQVLRPYEGALAPVEF HHHHHEEEEEEEECCCEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEC DRTRSDILNLTLIGGEEIRW CCCHHCEEEEEEECCCCCCC >Mature Secondary Structure MRVILSIALALLTACAVRQSPLGPWRLQPARDGLMLLPPRSSTSTLELKNVRSVHTRDTG CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCEEEHHCCHHHHCCCCC CEVSVPQIQLAWKGRTARVTLDERAVAAAPEIALKGPQAATGEQVRDLSWWPDFRQQLVR CEEECCEEEEEECCCEEEEEECCCHHHCCCCCEECCCCCCCCCHHHCCCCCHHHHHHHHH REQQGCLAHGEAELLAGRIVQNLPLPPMLAYKLRYGDYLMDGYLDLGPKFALKSVSPLLK HHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHEECCCCCHHHHHHCCCCHHHHHHHCHHHH PGIEKYHALADVAGYETAYYDVQQGGDGSLKIALRSVDQLVGRISTKKPRPTGSPLRVAN HHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCEEECC SARYVRLFFRTWRISGDYRIALLATRDVGLMDAMSSEFEKDPERFCRETNPARATCLSVP CCHHEEEEEEHEEECCCEEEEEEEECCCCHHHHHHHHHCCCHHHHHHCCCCHHHHHHHCC MEMMLTAEMRLRVNGKPAYVPVGGNVAEVLRTAGVRQPQTVIQSLQVLRPYEGALAPVEF HHHHHEEEEEEEECCCEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEC DRTRSDILNLTLIGGEEIRW CCCHHCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA