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The map label for this gene is 116620020

Identifier: 116620020

GI number: 116620020

Start: 1123279

End: 1123815

Strand: Direct

Name: 116620020

Synonym: Acid_0892

Alternate gene names: NA

Gene position: 1123279-1123815 (Clockwise)

Preceding gene: 116620019

Following gene: 116620021

Centisome position: 11.27

GC content: 67.23

Gene sequence:

>537_bases
ATGGCACAAGAGCAGGAGCAACGGAAGGAAAGCCGTCCGCCGCGCGAAGGCCGCGGACCGCAGGGTGGATCGCCGCAGGG
CGGACCGCCGCGTGGCGGACCCCCGCGCGGGGATCGTGGTGGCGAGCGGGGAGGCGAGCGTGGCGGGGATCGCGGCGGCG
ACCGGCGCGGCTTCGACCGCGGACGTCCCGAAGGGCCCCCGGAAATTGAGCTCGAAAAGCTGATCAACGACAGCCTCTAC
CTGGACAACCAGGCGCACGCCATCGTCAGCCGCATGCGCGATATGGATAGCGGCACGAAGAGCCAGCTGCGCCGGCTTTA
CAGCTCCGTGCGGCGCGCGGTGCGGGCACCCGAGGGCGAGCGGCAGCACGAATTCGTGATGCTGCGCGCGCGCCTGGCCT
ATACGATTGCGCGTCACGGGCTGCGCAGCCTGGATCAGCTGGAAAAACTTCTGCTGCAGGTCACGCGCCGCAACGACATC
AAGGGTTACGAACGGTTCAAGGATCTATTTGAGGCCATCGTGGCCTACAACGAGTAA

Upstream 100 bases:

>100_bases
TGATCGGCGAAATGATTGGCAAGAAATCGGCGGAAGTGAAGCTGCGGCCCGCGGGCCTGGTGGCCCTGGAATGGGCCAGA
TTGGTGACAGAGGTTTAGAA

Downstream 100 bases:

>100_bases
AGCATGAGCGCACACACCTCCCAAACCGAGTTGAAATTGATCGGGAAGCTGATTCTCGAAGGCGAAATGCTCTGCGAAAC
GGGCCTGCACGTCGGCGCCG

Product: CRISPR-associated Csm2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MAQEQEQRKESRPPREGRGPQGGSPQGGPPRGGPPRGDRGGERGGERGGDRGGDRRGFDRGRPEGPPEIELEKLINDSLY
LDNQAHAIVSRMRDMDSGTKSQLRRLYSSVRRAVRAPEGERQHEFVMLRARLAYTIARHGLRSLDQLEKLLLQVTRRNDI
KGYERFKDLFEAIVAYNE

Sequences:

>Translated_178_residues
MAQEQEQRKESRPPREGRGPQGGSPQGGPPRGGPPRGDRGGERGGERGGDRGGDRRGFDRGRPEGPPEIELEKLINDSLY
LDNQAHAIVSRMRDMDSGTKSQLRRLYSSVRRAVRAPEGERQHEFVMLRARLAYTIARHGLRSLDQLEKLLLQVTRRNDI
KGYERFKDLFEAIVAYNE
>Mature_177_residues
AQEQEQRKESRPPREGRGPQGGSPQGGPPRGGPPRGDRGGERGGERGGDRGGDRRGFDRGRPEGPPEIELEKLINDSLYL
DNQAHAIVSRMRDMDSGTKSQLRRLYSSVRRAVRAPEGERQHEFVMLRARLAYTIARHGLRSLDQLEKLLLQVTRRNDIK
GYERFKDLFEAIVAYNE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20160; Mature: 20029

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQEQEQRKESRPPREGRGPQGGSPQGGPPRGGPPRGDRGGERGGERGGDRGGDRRGFDR
CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GRPEGPPEIELEKLINDSLYLDNQAHAIVSRMRDMDSGTKSQLRRLYSSVRRAVRAPEGE
CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
RQHEFVMLRARLAYTIARHGLRSLDQLEKLLLQVTRRNDIKGYERFKDLFEAIVAYNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AQEQEQRKESRPPREGRGPQGGSPQGGPPRGGPPRGDRGGERGGERGGDRGGDRRGFDR
CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GRPEGPPEIELEKLINDSLYLDNQAHAIVSRMRDMDSGTKSQLRRLYSSVRRAVRAPEGE
CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
RQHEFVMLRARLAYTIARHGLRSLDQLEKLLLQVTRRNDIKGYERFKDLFEAIVAYNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA