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The map label for this gene is 116620021

Identifier: 116620021

GI number: 116620021

Start: 1123819

End: 1124655

Strand: Direct

Name: 116620021

Synonym: Acid_0893

Alternate gene names: NA

Gene position: 1123819-1124655 (Clockwise)

Preceding gene: 116620020

Following gene: 116620022

Centisome position: 11.28

GC content: 63.68

Gene sequence:

>837_bases
ATGAGCGCACACACCTCCCAAACCGAGTTGAAATTGATCGGGAAGCTGATTCTCGAAGGCGAAATGCTCTGCGAAACGGG
CCTGCACGTCGGCGCCGGCAAGGGTTCGCTGGAGATTGGCGGAAGCGATAATCCCGTGGTCAAAGACGCGTTCGGCCGGC
CGTATGTGCCGGGCAGCTCGCTGCGCGGGAAGATTCGTTCCCTGCTGGAGCAATCGAGCGGCCTGGCGGTGCCGGGCGAA
CTGGTCTACCTCTCCCGCCGCAAGGGACAGGAAGTGCGCATTCACCAGAGCGACCGTCCCGACGATGAAATCTGCCTGCT
GTTCGGACGCAATCCGGGCCGTATGGAGCGGGTGCAGGGCGAATCGCTGGACACGTCGCAGGCGACTCCGGCGCGGCTCG
CGGTCTTCGATGCGCCGCTCGATGTGGATAGCATCACGGCGGCCATGCGCGAGAACCTGGACGACGAACTCACCGAAGTG
AAGAGCGAGAACGCCATCGACCGCATCACGTCGCAGGCCAATCCGCGCACGCTGGAGCGGGTTCCGATGGGCGCGCGTTT
TAAGACGCGTTTCGTAATGGACGTGCTGTGCGACGAGGATGCGCCACTGTTTATGCGCGTGCTGGAAGGTTTGCGCCTGC
TGGAAGACGACGCGCTGGGCGGCGGCGGGTCGCGTGGCAGCGGCCGGGTGAGCTTCTCTAATCTGCGCCTGGCGTGGCGC
AGCAAGAATTACTATGCAACCGGGGCTCCCGAGAAGGAGATTAGCGCGGGTGCGACGCTGGCGGCGATTCAATCGGCCGT
CAACGAATCGGCATTCGGCTTCGTGCGCGAGGAGTAA

Upstream 100 bases:

>100_bases
GGAAAAACTTCTGCTGCAGGTCACGCGCCGCAACGACATCAAGGGTTACGAACGGTTCAAGGATCTATTTGAGGCCATCG
TGGCCTACAACGAGTAAAGC

Downstream 100 bases:

>100_bases
TGAACCCGGGACTGGTCGTTAAACTACGTCCTGCCGGGCCCTGGCGTATCGGTCCGGATTCGGGGGCGCGCAATCGTGTC
GATGTGATTTATCACAGCGA

Product: CRISPR-associated RAMP Csm3 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MSAHTSQTELKLIGKLILEGEMLCETGLHVGAGKGSLEIGGSDNPVVKDAFGRPYVPGSSLRGKIRSLLEQSSGLAVPGE
LVYLSRRKGQEVRIHQSDRPDDEICLLFGRNPGRMERVQGESLDTSQATPARLAVFDAPLDVDSITAAMRENLDDELTEV
KSENAIDRITSQANPRTLERVPMGARFKTRFVMDVLCDEDAPLFMRVLEGLRLLEDDALGGGGSRGSGRVSFSNLRLAWR
SKNYYATGAPEKEISAGATLAAIQSAVNESAFGFVREE

Sequences:

>Translated_278_residues
MSAHTSQTELKLIGKLILEGEMLCETGLHVGAGKGSLEIGGSDNPVVKDAFGRPYVPGSSLRGKIRSLLEQSSGLAVPGE
LVYLSRRKGQEVRIHQSDRPDDEICLLFGRNPGRMERVQGESLDTSQATPARLAVFDAPLDVDSITAAMRENLDDELTEV
KSENAIDRITSQANPRTLERVPMGARFKTRFVMDVLCDEDAPLFMRVLEGLRLLEDDALGGGGSRGSGRVSFSNLRLAWR
SKNYYATGAPEKEISAGATLAAIQSAVNESAFGFVREE
>Mature_277_residues
SAHTSQTELKLIGKLILEGEMLCETGLHVGAGKGSLEIGGSDNPVVKDAFGRPYVPGSSLRGKIRSLLEQSSGLAVPGEL
VYLSRRKGQEVRIHQSDRPDDEICLLFGRNPGRMERVQGESLDTSQATPARLAVFDAPLDVDSITAAMRENLDDELTEVK
SENAIDRITSQANPRTLERVPMGARFKTRFVMDVLCDEDAPLFMRVLEGLRLLEDDALGGGGSRGSGRVSFSNLRLAWRS
KNYYATGAPEKEISAGATLAAIQSAVNESAFGFVREE

Specific function: Unknown

COG id: COG1337

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.thermoautotrophicum MTH1080 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013412
- InterPro:   IPR005537 [H]

Pfam domain/function: PF03787 RAMPs [H]

EC number: NA

Molecular weight: Translated: 30153; Mature: 30022

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAHTSQTELKLIGKLILEGEMLCETGLHVGAGKGSLEIGGSDNPVVKDAFGRPYVPGSS
CCCCCCHHHHHHHHHHHHCCHHHHHCCCEEECCCCCEEECCCCCCEEHHCCCCCCCCCHH
LRGKIRSLLEQSSGLAVPGELVYLSRRKGQEVRIHQSDRPDDEICLLFGRNPGRMERVQG
HHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCEEEEECCCCCHHHHHCC
ESLDTSQATPARLAVFDAPLDVDSITAAMRENLDDELTEVKSENAIDRITSQANPRTLER
CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
VPMGARFKTRFVMDVLCDEDAPLFMRVLEGLRLLEDDALGGGGSRGSGRVSFSNLRLAWR
CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEE
SKNYYATGAPEKEISAGATLAAIQSAVNESAFGFVREE
CCCEEECCCCHHHHHCCHHHHHHHHHHHHHHCCEEECC
>Mature Secondary Structure 
SAHTSQTELKLIGKLILEGEMLCETGLHVGAGKGSLEIGGSDNPVVKDAFGRPYVPGSS
CCCCCHHHHHHHHHHHHCCHHHHHCCCEEECCCCCEEECCCCCCEEHHCCCCCCCCCHH
LRGKIRSLLEQSSGLAVPGELVYLSRRKGQEVRIHQSDRPDDEICLLFGRNPGRMERVQG
HHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCEEEEECCCCCHHHHHCC
ESLDTSQATPARLAVFDAPLDVDSITAAMRENLDDELTEVKSENAIDRITSQANPRTLER
CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
VPMGARFKTRFVMDVLCDEDAPLFMRVLEGLRLLEDDALGGGGSRGSGRVSFSNLRLAWR
CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEE
SKNYYATGAPEKEISAGATLAAIQSAVNESAFGFVREE
CCCEEECCCCHHHHHCCHHHHHHHHHHHHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]