Click here to switch to the map view.

The map label for this gene is 116620009

Identifier: 116620009

GI number: 116620009

Start: 1101968

End: 1102405

Strand: Reverse

Name: 116620009

Synonym: Acid_0881

Alternate gene names: NA

Gene position: 1102405-1101968 (Counterclockwise)

Preceding gene: 116620010

Following gene: 116620005

Centisome position: 11.06

GC content: 60.5

Gene sequence:

>438_bases
GTGGCGGTGTTCGTAAAGAGCGTTCTGATCGACGCGCCGGTTGACGAGGTCTTCCGCTTCCACGAACGCGAGGACGCGCT
CGATTTGTTATCGCCGGGCTTCCCGCCGGTGAGGAAGATTTCGGCTACAGGCGGCATCAAGGTGGGGACACGAGTGGAAC
TTCGGGTCGGACTGTTTCGATGGGTGGCGCTCCACACAGCCTACGAAAAAGACAGACTCTTCGTCGATGAACAAATCGAA
GGGCCCTTTAAGAAGTGGGTTCACCGTCATGAATTCGAGCGCGCCGGCAGCGGGACGCGGCTGACCGACCGGGTTGAATA
CGAGTTGACGGGCGGCGCGCTGGTCAAGTCCCTATTCGGCGGGGCCGTGGCTGTAGGTCTGCGGCGCATGTTCGCGCACC
GTCATCGCGTCACATGCGAGATCTGCGAGCGTTCATAA

Upstream 100 bases:

>100_bases
TCGATGAAGGCACTCTCGGGCGCGCCGGGCTGGCTCTGGAGCGGGCGTTCGATATGACCGGGCAGCATCCAGCCGGATTT
TAGATCGTTACACTAAAGTC

Downstream 100 bases:

>100_bases
CCCGGACAGCCGTGAACCGGGAGGCGCGGGTACTTGGGGAAGCGCGGATCCTCGAACGACTTGCCGCACTGGTAGAAGAC
GGCGCCGCGGTCGCTGCGGT

Product: cyclase/dehydrase

Products: NA

Alternate protein names: Nucleoside-Diphosphate Sugar Epimerase; NAD-Dependent Epimerase/Dehydratase; NAD-Dependent Epimerase/Dehydratase Family Protein; Streptomyces Cyclase/Dehydrase Superfamily

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MAVFVKSVLIDAPVDEVFRFHEREDALDLLSPGFPPVRKISATGGIKVGTRVELRVGLFRWVALHTAYEKDRLFVDEQIE
GPFKKWVHRHEFERAGSGTRLTDRVEYELTGGALVKSLFGGAVAVGLRRMFAHRHRVTCEICERS

Sequences:

>Translated_145_residues
MAVFVKSVLIDAPVDEVFRFHEREDALDLLSPGFPPVRKISATGGIKVGTRVELRVGLFRWVALHTAYEKDRLFVDEQIE
GPFKKWVHRHEFERAGSGTRLTDRVEYELTGGALVKSLFGGAVAVGLRRMFAHRHRVTCEICERS
>Mature_144_residues
AVFVKSVLIDAPVDEVFRFHEREDALDLLSPGFPPVRKISATGGIKVGTRVELRVGLFRWVALHTAYEKDRLFVDEQIEG
PFKKWVHRHEFERAGSGTRLTDRVEYELTGGALVKSLFGGAVAVGLRRMFAHRHRVTCEICERS

Specific function: Unknown

COG id: COG4276

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16450; Mature: 16319

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVFVKSVLIDAPVDEVFRFHEREDALDLLSPGFPPVRKISATGGIKVGTRVELRVGLFR
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHEECCCCCEEECCEEHHHHHHHH
WVALHTAYEKDRLFVDEQIEGPFKKWVHRHEFERAGSGTRLTDRVEYELTGGALVKSLFG
HHHHHHHHHCCCEEECHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHH
GAVAVGLRRMFAHRHRVTCEICERS
HHHHHHHHHHHHHHHCCCCEECCCC
>Mature Secondary Structure 
AVFVKSVLIDAPVDEVFRFHEREDALDLLSPGFPPVRKISATGGIKVGTRVELRVGLFR
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHEECCCCCEEECCEEHHHHHHHH
WVALHTAYEKDRLFVDEQIEGPFKKWVHRHEFERAGSGTRLTDRVEYELTGGALVKSLFG
HHHHHHHHHCCCEEECHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHH
GAVAVGLRRMFAHRHRVTCEICERS
HHHHHHHHHHHHHHHCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA