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The map label for this gene is 116620005

Identifier: 116620005

GI number: 116620005

Start: 1094749

End: 1096644

Strand: Reverse

Name: 116620005

Synonym: Acid_0877

Alternate gene names: NA

Gene position: 1096644-1094749 (Counterclockwise)

Preceding gene: 116620009

Following gene: 116620004

Centisome position: 11.0

GC content: 55.38

Gene sequence:

>1896_bases
ATGACTTCAAGTACTCCTGTAGCGCTTATTAACATGCCTTTCGCGATGGCCAATCGGCCCCCGCTCGGCATTAGTACACT
CAAGGCAGCCCTGACGCTTCGTGGAATTCGCTGCGATGTTCACCATTTCAATCTGCTGCTGGCGAACTGGATCGGGCCAG
ACCTTTACCAACAGATTAGCGATCGCGCCAGTCATATGGTGTTTGCGGGCGAGTGGCTCTTTGCCCAGCAACTGTTTGAT
CGGAAGGACATTGGCGACGTCGAGTATCTCGAGTACATCGGCACCCACTTGCGTGTGTCCTCCGCACTCATCGACACCTT
CGTGAGTCTGCGTCCATTCATCGGCCCTTTTCTGGATCGTTGCGAGCGAGACGTTGATTGGTCACGTTATACGATCGTTG
GCTTTACCTCAATGTTCGAGCAGAATCTCGCGACGCTCGCACTCGCAAGCCGAATCAAGCGAAGGTTCCCGCGCATTTGC
ATCGTCATGGGTGGCGCCAACTGCGAGAGCGAGATGGGGGAACAACTTCACAAGTCGTTTCCGTTTCTCGACTATGTGTT
CACGGGCCAATCGGATTGGAGCTTCCCACAATTTGTCGAGCACGTAATTACGAATCGGCAGGTCGATGCCATTCGAGGAT
TGGTTCACAGACGCGGCGGCGTTTCGGTCTCGACCGGCCGCCCAGAACCAGTGGGCGATTTGAATCGCTTACCGGTCCCA
GACTATGACGACTATGTTACGCAGTTAGGTGCGTATCGACTGCTGGGCAAACTTCCGGTTCGTCTTCAGTTCGAGACCTC
GCGGGGTTGCTGGTGGGGCATGAAGCAGCACTGCACGTTCTGCGGGTTTAATGCGGAAACGATGCAGTTCGCCGCCAAGT
CACCCGGCCGGGTGGTTGATGAACTTGAGTACTTAGCGTCCCGCTATAACACCACCGAGTTTGACGCAGTCGATAACATT
CTCGACTATCGCGCGTTCGCGACCGTATTGCCACGTCTCGCTGAGCGAAAGCCGGCGTTCTCGCTGTTCTACGAGATCAA
GTCTAATCTTCGCCGCGATCAGGTGCGCCTGCTTGCGCAGGCGGGTGTTCGGTACATCCAGCCGGGAATTGAAAGTCTCA
ATACCCAGGTTCTTGGCGTCATGAAAAAAGGTTTGACGGCCCTCCAAAACATTCAGGTTCTAAAGTGGTGCCGCGAATTC
GCCATCGTGCCGAGTTGGAACTTGATTTATGGTTTTCCGGATGAACTGCCGGAAGCATACGCCGAGATGGCGAGTGTCAT
GCGCTGGCTTCATCATTTGCCCGCGCCTAGGGGAAGCGGGAAGATACGCTTGGATCGCTTCAGCCCACACTGGAGTAACC
CGGAAGCATTTGGGCTTCGGAACGTCCGCCCTCTTCAGGTCTATCAGTACCTTTATCCGCTGCGCGACGAGGAACGAAGG
CGAATCGCCTACTTCTTTGAATACGACTATGCCGAACCTCGAGACGTGCCGTCTTACACCGAAGCAGCAGACCGAGCTAT
CAACGAATGGCGCGCAGCTGAAACCGCCGGAGCCGCGCTGATCGTCGATGATGCTGGAGAGAGCGCAACCATCAAGGATA
CACGTATGCCCGGCGTAACGAGGGAGTTCAGACTCGATGGCTGGAAGGCGCACGCGTACCGCATGCTTGACCAAGCACGA
CCACGAGGCTCGCTTGTCACCGACCTTCAGGAGAGTCGGCACGGAGCTCCAAGTGAAGAGATAATCGATTCCTTTCTTGC
TTGTTGCGTGGAATCCGGGCTGATGTTGCAGGAACAGGACCGCTACCTCGCCCTTGCCGTTAGGAACGACTTCGACACGA
ACTATCGCGAACAATCGCAGAGTACTTTCGAAAGGAGTCCGCATGTCAACAACTGA

Upstream 100 bases:

>100_bases
TTGACTGCCCGGGAAATTGATCAAGATTTAGAGTGTTTTGGGCAGATCGTTCTTGACTCCGTTAAGAGTTACCCATAATC
TATTAGCGATATCTTTGGGT

Downstream 100 bases:

>100_bases
AGAGAACGCCCCCACAGGGGCAAAAACGACTGATCGGTACGAGTTGCACGTGATCCGGGAAACCGGACAAGTAGTCCGCC
TCACGCGCGTCGATGATAAC

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 631; Mature: 630

Protein sequence:

>631_residues
MTSSTPVALINMPFAMANRPPLGISTLKAALTLRGIRCDVHHFNLLLANWIGPDLYQQISDRASHMVFAGEWLFAQQLFD
RKDIGDVEYLEYIGTHLRVSSALIDTFVSLRPFIGPFLDRCERDVDWSRYTIVGFTSMFEQNLATLALASRIKRRFPRIC
IVMGGANCESEMGEQLHKSFPFLDYVFTGQSDWSFPQFVEHVITNRQVDAIRGLVHRRGGVSVSTGRPEPVGDLNRLPVP
DYDDYVTQLGAYRLLGKLPVRLQFETSRGCWWGMKQHCTFCGFNAETMQFAAKSPGRVVDELEYLASRYNTTEFDAVDNI
LDYRAFATVLPRLAERKPAFSLFYEIKSNLRRDQVRLLAQAGVRYIQPGIESLNTQVLGVMKKGLTALQNIQVLKWCREF
AIVPSWNLIYGFPDELPEAYAEMASVMRWLHHLPAPRGSGKIRLDRFSPHWSNPEAFGLRNVRPLQVYQYLYPLRDEERR
RIAYFFEYDYAEPRDVPSYTEAADRAINEWRAAETAGAALIVDDAGESATIKDTRMPGVTREFRLDGWKAHAYRMLDQAR
PRGSLVTDLQESRHGAPSEEIIDSFLACCVESGLMLQEQDRYLALAVRNDFDTNYREQSQSTFERSPHVNN

Sequences:

>Translated_631_residues
MTSSTPVALINMPFAMANRPPLGISTLKAALTLRGIRCDVHHFNLLLANWIGPDLYQQISDRASHMVFAGEWLFAQQLFD
RKDIGDVEYLEYIGTHLRVSSALIDTFVSLRPFIGPFLDRCERDVDWSRYTIVGFTSMFEQNLATLALASRIKRRFPRIC
IVMGGANCESEMGEQLHKSFPFLDYVFTGQSDWSFPQFVEHVITNRQVDAIRGLVHRRGGVSVSTGRPEPVGDLNRLPVP
DYDDYVTQLGAYRLLGKLPVRLQFETSRGCWWGMKQHCTFCGFNAETMQFAAKSPGRVVDELEYLASRYNTTEFDAVDNI
LDYRAFATVLPRLAERKPAFSLFYEIKSNLRRDQVRLLAQAGVRYIQPGIESLNTQVLGVMKKGLTALQNIQVLKWCREF
AIVPSWNLIYGFPDELPEAYAEMASVMRWLHHLPAPRGSGKIRLDRFSPHWSNPEAFGLRNVRPLQVYQYLYPLRDEERR
RIAYFFEYDYAEPRDVPSYTEAADRAINEWRAAETAGAALIVDDAGESATIKDTRMPGVTREFRLDGWKAHAYRMLDQAR
PRGSLVTDLQESRHGAPSEEIIDSFLACCVESGLMLQEQDRYLALAVRNDFDTNYREQSQSTFERSPHVNN
>Mature_630_residues
TSSTPVALINMPFAMANRPPLGISTLKAALTLRGIRCDVHHFNLLLANWIGPDLYQQISDRASHMVFAGEWLFAQQLFDR
KDIGDVEYLEYIGTHLRVSSALIDTFVSLRPFIGPFLDRCERDVDWSRYTIVGFTSMFEQNLATLALASRIKRRFPRICI
VMGGANCESEMGEQLHKSFPFLDYVFTGQSDWSFPQFVEHVITNRQVDAIRGLVHRRGGVSVSTGRPEPVGDLNRLPVPD
YDDYVTQLGAYRLLGKLPVRLQFETSRGCWWGMKQHCTFCGFNAETMQFAAKSPGRVVDELEYLASRYNTTEFDAVDNIL
DYRAFATVLPRLAERKPAFSLFYEIKSNLRRDQVRLLAQAGVRYIQPGIESLNTQVLGVMKKGLTALQNIQVLKWCREFA
IVPSWNLIYGFPDELPEAYAEMASVMRWLHHLPAPRGSGKIRLDRFSPHWSNPEAFGLRNVRPLQVYQYLYPLRDEERRR
IAYFFEYDYAEPRDVPSYTEAADRAINEWRAAETAGAALIVDDAGESATIKDTRMPGVTREFRLDGWKAHAYRMLDQARP
RGSLVTDLQESRHGAPSEEIIDSFLACCVESGLMLQEQDRYLALAVRNDFDTNYREQSQSTFERSPHVNN

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 72201; Mature: 72070

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSTPVALINMPFAMANRPPLGISTLKAALTLRGIRCDVHHFNLLLANWIGPDLYQQIS
CCCCCCEEEEECCHHHCCCCCCCHHHHHHHHHHHCCEEEHHHHHHHHHHHCCHHHHHHHH
DRASHMVFAGEWLFAQQLFDRKDIGDVEYLEYIGTHLRVSSALIDTFVSLRPFIGPFLDR
HHHHHEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CERDVDWSRYTIVGFTSMFEQNLATLALASRIKRRFPRICIVMGGANCESEMGEQLHKSF
HHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHC
PFLDYVFTGQSDWSFPQFVEHVITNRQVDAIRGLVHRRGGVSVSTGRPEPVGDLNRLPVP
CCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCC
DYDDYVTQLGAYRLLGKLPVRLQFETSRGCWWGMKQHCTFCGFNAETMQFAAKSPGRVVD
CHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCEEECCCHHHHHHHHCCCCHHHH
ELEYLASRYNTTEFDAVDNILDYRAFATVLPRLAERKPAFSLFYEIKSNLRRDQVRLLAQ
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
AGVRYIQPGIESLNTQVLGVMKKGLTALQNIQVLKWCREFAIVPSWNLIYGFPDELPEAY
HCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHH
AEMASVMRWLHHLPAPRGSGKIRLDRFSPHWSNPEAFGLRNVRPLQVYQYLYPLRDEERR
HHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
RIAYFFEYDYAEPRDVPSYTEAADRAINEWRAAETAGAALIVDDAGESATIKDTRMPGVT
EEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEECCCCCCCC
REFRLDGWKAHAYRMLDQARPRGSLVTDLQESRHGAPSEEIIDSFLACCVESGLMLQEQD
HHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEECCC
RYLALAVRNDFDTNYREQSQSTFERSPHVNN
CEEEEEEECCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TSSTPVALINMPFAMANRPPLGISTLKAALTLRGIRCDVHHFNLLLANWIGPDLYQQIS
CCCCCEEEEECCHHHCCCCCCCHHHHHHHHHHHCCEEEHHHHHHHHHHHCCHHHHHHHH
DRASHMVFAGEWLFAQQLFDRKDIGDVEYLEYIGTHLRVSSALIDTFVSLRPFIGPFLDR
HHHHHEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CERDVDWSRYTIVGFTSMFEQNLATLALASRIKRRFPRICIVMGGANCESEMGEQLHKSF
HHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHC
PFLDYVFTGQSDWSFPQFVEHVITNRQVDAIRGLVHRRGGVSVSTGRPEPVGDLNRLPVP
CCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCC
DYDDYVTQLGAYRLLGKLPVRLQFETSRGCWWGMKQHCTFCGFNAETMQFAAKSPGRVVD
CHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCEEECCCHHHHHHHHCCCCHHHH
ELEYLASRYNTTEFDAVDNILDYRAFATVLPRLAERKPAFSLFYEIKSNLRRDQVRLLAQ
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
AGVRYIQPGIESLNTQVLGVMKKGLTALQNIQVLKWCREFAIVPSWNLIYGFPDELPEAY
HCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHH
AEMASVMRWLHHLPAPRGSGKIRLDRFSPHWSNPEAFGLRNVRPLQVYQYLYPLRDEERR
HHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
RIAYFFEYDYAEPRDVPSYTEAADRAINEWRAAETAGAALIVDDAGESATIKDTRMPGVT
EEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEECCCCCCCC
REFRLDGWKAHAYRMLDQARPRGSLVTDLQESRHGAPSEEIIDSFLACCVESGLMLQEQD
HHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEECCC
RYLALAVRNDFDTNYREQSQSTFERSPHVNN
CEEEEEEECCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]