| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116619980
Identifier: 116619980
GI number: 116619980
Start: 1056140
End: 1056883
Strand: Direct
Name: 116619980
Synonym: Acid_0852
Alternate gene names: NA
Gene position: 1056140-1056883 (Clockwise)
Preceding gene: 116619979
Following gene: 116619986
Centisome position: 10.6
GC content: 58.2
Gene sequence:
>744_bases ATGACTCGCAGTTTGAAACTTGGCGCCGCGCTCGCGTTCGCCGCCGCCATCGTTTGCGCCGCCGATCTGCCCAAGGGCGA GGCGCTGCTCGATAAGTACATCGAAGCCACCGGCGGCAAGGCGGCGTACGCCAAGATCCACAGCGATATGACCACCGGCA CCATGGAGTTCAAGGCGATGGGCCTGAAAGGCAAGGTGACCACATGGGCCGCCGAGCCCGACAAGAAGTACTCCGAGGTG GTGCTCGGCGGCATCGGAAAGATGCAGGAGGGCGTCAACGACGGTGTCGCGTGGAGCCTCTCTTCCATGCAAGGCCCCCA TATCAAGGATGGCGACGAGAAGGCCGAGACGCTGCTGCAGGCCAAGTTCAACTCCGACCTCAATTGGCGCGAGCAGTTCA AGAGCGCCGAAACCGTCGGCGTGGAAACGGTGGATGGCAAGGAGTGTTACAAGGTCGTAATGACGCCGAAGACCGGCAGT CCAAGCACGCGCTGGTTCGACAAGGATACGAACCTGCTGGTCAAGCTATCGATGACCACCAAGAGCGCTATGGGCGAAGT TCAATCCGAGTCGGTAGTCAGCGATTATCGCAAAGAGGGCGAAGTCCTCATGCCCCACAAAATCAATTCAAAGGTCGCCA CCATGGAGCTGGTGATGACCGTGGAATCCGTGCAGCACAACCCTGAAATCCCCAAGGACAAATTCGATATTCCGGAAGAA GTCAAAGCGTTGGTGAAGAAGTAA
Upstream 100 bases:
>100_bases AAGTGCGCCTCACGCGCGAGCAGTTACTGCAGGGCAAGGACCCGGCTCTCGATGCCGCCGTTACGTGGATTCAGGAACAG AAGAAATGAGGTACTTCCAA
Downstream 100 bases:
>100_bases CGGCTCGGATAAGGATACACGCCAGCCCACCGAGCCGCGATCGTTAGGGAGCGATCCAGATCTTCAGCTGACTGCCTTCT TCCGGAATTTCTTCAACCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MTRSLKLGAALAFAAAIVCAADLPKGEALLDKYIEATGGKAAYAKIHSDMTTGTMEFKAMGLKGKVTTWAAEPDKKYSEV VLGGIGKMQEGVNDGVAWSLSSMQGPHIKDGDEKAETLLQAKFNSDLNWREQFKSAETVGVETVDGKECYKVVMTPKTGS PSTRWFDKDTNLLVKLSMTTKSAMGEVQSESVVSDYRKEGEVLMPHKINSKVATMELVMTVESVQHNPEIPKDKFDIPEE VKALVKK
Sequences:
>Translated_247_residues MTRSLKLGAALAFAAAIVCAADLPKGEALLDKYIEATGGKAAYAKIHSDMTTGTMEFKAMGLKGKVTTWAAEPDKKYSEV VLGGIGKMQEGVNDGVAWSLSSMQGPHIKDGDEKAETLLQAKFNSDLNWREQFKSAETVGVETVDGKECYKVVMTPKTGS PSTRWFDKDTNLLVKLSMTTKSAMGEVQSESVVSDYRKEGEVLMPHKINSKVATMELVMTVESVQHNPEIPKDKFDIPEE VKALVKK >Mature_246_residues TRSLKLGAALAFAAAIVCAADLPKGEALLDKYIEATGGKAAYAKIHSDMTTGTMEFKAMGLKGKVTTWAAEPDKKYSEVV LGGIGKMQEGVNDGVAWSLSSMQGPHIKDGDEKAETLLQAKFNSDLNWREQFKSAETVGVETVDGKECYKVVMTPKTGSP STRWFDKDTNLLVKLSMTTKSAMGEVQSESVVSDYRKEGEVLMPHKINSKVATMELVMTVESVQHNPEIPKDKFDIPEEV KALVKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26925; Mature: 26794
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSLKLGAALAFAAAIVCAADLPKGEALLDKYIEATGGKAAYAKIHSDMTTGTMEFKAM CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEHHHCCCCCCEEEEEEE GLKGKVTTWAAEPDKKYSEVVLGGIGKMQEGVNDGVAWSLSSMQGPHIKDGDEKAETLLQ CCCCCEEEECCCCCHHHHHHHHHCHHHHHHCCCCCCEEEHHCCCCCCCCCCHHHHHHHHH AKFNSDLNWREQFKSAETVGVETVDGKECYKVVMTPKTGSPSTRWFDKDTNLLVKLSMTT HHHCCCCCHHHHHCCHHHCCEECCCCHHEEEEEEECCCCCCCCCEECCCCCEEEEEEECH KSAMGEVQSESVVSDYRKEGEVLMPHKINSKVATMELVMTVESVQHNPEIPKDKFDIPEE HHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH VKALVKK HHHHHCC >Mature Secondary Structure TRSLKLGAALAFAAAIVCAADLPKGEALLDKYIEATGGKAAYAKIHSDMTTGTMEFKAM CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEHHHCCCCCCEEEEEEE GLKGKVTTWAAEPDKKYSEVVLGGIGKMQEGVNDGVAWSLSSMQGPHIKDGDEKAETLLQ CCCCCEEEECCCCCHHHHHHHHHCHHHHHHCCCCCCEEEHHCCCCCCCCCCHHHHHHHHH AKFNSDLNWREQFKSAETVGVETVDGKECYKVVMTPKTGSPSTRWFDKDTNLLVKLSMTT HHHCCCCCHHHHHCCHHHCCEECCCCHHEEEEEEECCCCCCCCCEECCCCCEEEEEEECH KSAMGEVQSESVVSDYRKEGEVLMPHKINSKVATMELVMTVESVQHNPEIPKDKFDIPEE HHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH VKALVKK HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA