| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116619818
Identifier: 116619818
GI number: 116619818
Start: 862415
End: 862693
Strand: Direct
Name: 116619818
Synonym: Acid_0688
Alternate gene names: NA
Gene position: 862415-862693 (Clockwise)
Preceding gene: 116619816
Following gene: 116619819
Centisome position: 8.65
GC content: 53.76
Gene sequence:
>279_bases TTGATTGGATTATTCAAGTGCTCGGATACGGTATTGCTCTTTGACGACCAACGAGTTCGGCGATTTCAATCGATCGAACG GCCGGCGCGACGAAAGCTCCTGTACTTGCACAGGGCGCTGCGGTTGGAGGATCTTCGCGTATCTCCCGGCAACCAGCTCG AACTGCTGAAGGGTGGTCGAGCGGGTACGTACAGTATGCGAATCAACGACCGTTGGCGAATCTGTTTCGCCTGGCGTGAA GGGGATGCCTATGACGTTGAGGTTGTGGATTATCACTAA
Upstream 100 bases:
>100_bases AAGAATTGAGTCGGCGCGCACGCCCGGCGCGCATAGTACAGTTCTGAAACGGGTGTGGTGATGCGCTTGACATAATACGC TTAACGTCATAGGCTGAGAC
Downstream 100 bases:
>100_bases GCGCGGGAGATCGAGATGAAAACGCCGAAGCGCCTGGATCCGATTCATCCGGGAGAGATTCTTCTGGAGGAATTCATGAA GCCGCTGGGGATCAGTATCA
Product: plasmid maintenance system killer
Products: NA
Alternate protein names: Plasmid Maintenance System Killer Protein; Killer Protein; Plasmid Maintenance System Killer Family Protein; Xin-Antitoxin System Toxin Component RelE Family; Proteic Killer Protein; Plasmid Maintenance System Protein; Xin HigB; Plantaricin Biosynthesis Protein PlnX; Xin Of Plasmid Maintenance System
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MIGLFKCSDTVLLFDDQRVRRFQSIERPARRKLLYLHRALRLEDLRVSPGNQLELLKGGRAGTYSMRINDRWRICFAWRE GDAYDVEVVDYH
Sequences:
>Translated_92_residues MIGLFKCSDTVLLFDDQRVRRFQSIERPARRKLLYLHRALRLEDLRVSPGNQLELLKGGRAGTYSMRINDRWRICFAWRE GDAYDVEVVDYH >Mature_92_residues MIGLFKCSDTVLLFDDQRVRRFQSIERPARRKLLYLHRALRLEDLRVSPGNQLELLKGGRAGTYSMRINDRWRICFAWRE GDAYDVEVVDYH
Specific function: Unknown
COG id: COG3549
COG function: function code R; Plasmid maintenance system killer protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10973; Mature: 10973
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGLFKCSDTVLLFDDQRVRRFQSIERPARRKLLYLHRALRLEDLRVSPGNQLELLKGGR CCEEEECCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHCEEEEEECCCCEEEEEECCC AGTYSMRINDRWRICFAWREGDAYDVEVVDYH CCEEEEEECCCEEEEEEEECCCEEEEEEEEEC >Mature Secondary Structure MIGLFKCSDTVLLFDDQRVRRFQSIERPARRKLLYLHRALRLEDLRVSPGNQLELLKGGR CCEEEECCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHCEEEEEECCCCEEEEEECCC AGTYSMRINDRWRICFAWREGDAYDVEVVDYH CCEEEEEECCCEEEEEEEECCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA