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The map label for this gene is vapI [H]

Identifier: 116619819

GI number: 116619819

Start: 862709

End: 863059

Strand: Direct

Name: vapI [H]

Synonym: Acid_0689

Alternate gene names: 116619819

Gene position: 862709-863059 (Clockwise)

Preceding gene: 116619818

Following gene: 116619824

Centisome position: 8.66

GC content: 58.69

Gene sequence:

>351_bases
ATGAAAACGCCGAAGCGCCTGGATCCGATTCATCCGGGAGAGATTCTTCTGGAGGAATTCATGAAGCCGCTGGGGATCAG
TATCAATCAGCTAGCTCGCGATTTGGATGTGCCGCCAAACCGGATTGGCGCAATCGTAAATGGCACTCGATCGATTACGG
CGGACACGGCGTTGCGGCTCGGAACCTACTTTGATGTTTCGCCGGAGACGTGGCTCGGATTGCAGCTTGACTACGACCTG
CGCCGTATTCGTCAGACGGTCGGCGACGAGATCGTGCGCCGGGTTCGCACGCGGCCGGCGGCGTTACACCCGGCCCCTCC
TACATTAACGTCAAGGGGTCCACGTCGATGA

Upstream 100 bases:

>100_bases
TATGCGAATCAACGACCGTTGGCGAATCTGTTTCGCCTGGCGTGAAGGGGATGCCTATGACGTTGAGGTTGTGGATTATC
ACTAAGCGCGGGAGATCGAG

Downstream 100 bases:

>100_bases
CGAGGGCGGTGGCGGACCATTTGTGGTCCACGGCGTAGGCGCGGATTTTCTGGAGGAGTTCGTTGAGCGACTTGCGGCTG
GCGGCTTTGATCAGAAACTG

Product: XRE family plasmid maintenance system antidote protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MKTPKRLDPIHPGEILLEEFMKPLGISINQLARDLDVPPNRIGAIVNGTRSITADTALRLGTYFDVSPETWLGLQLDYDL
RRIRQTVGDEIVRRVRTRPAALHPAPPTLTSRGPRR

Sequences:

>Translated_116_residues
MKTPKRLDPIHPGEILLEEFMKPLGISINQLARDLDVPPNRIGAIVNGTRSITADTALRLGTYFDVSPETWLGLQLDYDL
RRIRQTVGDEIVRRVRTRPAALHPAPPTLTSRGPRR
>Mature_116_residues
MKTPKRLDPIHPGEILLEEFMKPLGISINQLARDLDVPPNRIGAIVNGTRSITADTALRLGTYFDVSPETWLGLQLDYDL
RRIRQTVGDEIVRRVRTRPAALHPAPPTLTSRGPRR

Specific function: Unknown

COG id: COG3093

COG function: function code R; Plasmid maintenance system antidote protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081745, Length=87, Percent_Identity=39.0804597701149, Blast_Score=70, Evalue=3e-14,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013430
- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 13058; Mature: 13058

Theoretical pI: Translated: 10.98; Mature: 10.98

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTPKRLDPIHPGEILLEEFMKPLGISINQLARDLDVPPNRIGAIVNGTRSITADTALRL
CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHH
GTYFDVSPETWLGLQLDYDLRRIRQTVGDEIVRRVRTRPAALHPAPPTLTSRGPRR
CCEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKTPKRLDPIHPGEILLEEFMKPLGISINQLARDLDVPPNRIGAIVNGTRSITADTALRL
CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHH
GTYFDVSPETWLGLQLDYDLRRIRQTVGDEIVRRVRTRPAALHPAPPTLTSRGPRR
CCEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8169216 [H]