| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116619562
Identifier: 116619562
GI number: 116619562
Start: 523765
End: 524697
Strand: Direct
Name: 116619562
Synonym: Acid_0423
Alternate gene names: NA
Gene position: 523765-524697 (Clockwise)
Preceding gene: 116619561
Following gene: 116619563
Centisome position: 5.26
GC content: 62.49
Gene sequence:
>933_bases ATGAGAATACTCGTCTCCGCCTCTCTTGCCGCGTGTGCGCTGTACGGCCAAACCGGAACGCTACAGCCGCCATCGGCCGG CTTTGTCTTCGACCAGTCGTCGCAGGTGTTGCGGCGCGTGCAGGGGATTCCCGGAGCATCGTTGATCGGAGCGGGCGTGG ACTTCGGCTTCCCGATTACGGCGGCGACGGTTTCACCACGTATGGATTCGGTGCTGGTAGTCGCGGCTGATGCCACACCT CACCTGTTCCGCGTCGATGGTGTGTCCGCGGTCGAAACTCAGGTCTCTGGCCTGTCCGCTCCGGACCGCGTCGCCTTCAG TCCGTCCGGCACGGCCGCTGCCCTGTATTCCGAAAGCGGTGTGCAGGTGATTAAGGGGCTCCCAGTCGCCCCGGTAGTTA CCGCGACTATCAGGCTGCGCATAACTTCGAAGTTGCGCCGGACAGCGTTGGATAGTCTGGCGGTCAGCGACGATGGCGCG TACCTCCTGTATGCGGCCGGCGGCCCCGTGGAATTGGTCGGCGTGGCCGGCGACAGTCGGAAGCTACTGGATGCGCCTCC CGGAGCGCTCGTCGCCTTCGCACCGGGAGGGCACGATGCCGCGGTATTCCACGGCGGCATATTGACCATCTTCCAGGATC TGATTGGCGCCGCTACACGCCGCGACATTCAGGGTGTGAGTGCGCCTTCAGCATTGGCATTTGCCAGCGATGGCCGTACA CTCTTCGCGGCCAGTGAACGGATCCGCGGAATTTACTCGATCGAAGCGACTACGGGTAACACCTCTACCTTATCCTGCGA TTGCGCTCCCACCACGCTGATCACCATGGGTTCGTTCTTCCGTCTCAATGAATTGGGCGACGGTCCGCTCTGGTTGCTGG ATGCGAGCGCTGCCCCGCGCCTGGTTTTTGTGCCCGCTAAATCTGCGCTTTGA
Upstream 100 bases:
>100_bases ACGCCACCCACAACGGCGGCGGCGCCACGCCAGTGCCGCCCACTTCCGGCACCACGATCTCTGCCGGCGCCGGCAGCGTA GGGCCTCCGAGGTAATCGCC
Downstream 100 bases:
>100_bases GATAAATGCCCGGGCGATCTTAGCAGTTCGCCCGGCAATCTTACACATCCTTCAGACTCACAACACATTCATTTCGCAAA AGTTCCATTACATTTCCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MRILVSASLAACALYGQTGTLQPPSAGFVFDQSSQVLRRVQGIPGASLIGAGVDFGFPITAATVSPRMDSVLVVAADATP HLFRVDGVSAVETQVSGLSAPDRVAFSPSGTAAALYSESGVQVIKGLPVAPVVTATIRLRITSKLRRTALDSLAVSDDGA YLLYAAGGPVELVGVAGDSRKLLDAPPGALVAFAPGGHDAAVFHGGILTIFQDLIGAATRRDIQGVSAPSALAFASDGRT LFAASERIRGIYSIEATTGNTSTLSCDCAPTTLITMGSFFRLNELGDGPLWLLDASAAPRLVFVPAKSAL
Sequences:
>Translated_310_residues MRILVSASLAACALYGQTGTLQPPSAGFVFDQSSQVLRRVQGIPGASLIGAGVDFGFPITAATVSPRMDSVLVVAADATP HLFRVDGVSAVETQVSGLSAPDRVAFSPSGTAAALYSESGVQVIKGLPVAPVVTATIRLRITSKLRRTALDSLAVSDDGA YLLYAAGGPVELVGVAGDSRKLLDAPPGALVAFAPGGHDAAVFHGGILTIFQDLIGAATRRDIQGVSAPSALAFASDGRT LFAASERIRGIYSIEATTGNTSTLSCDCAPTTLITMGSFFRLNELGDGPLWLLDASAAPRLVFVPAKSAL >Mature_310_residues MRILVSASLAACALYGQTGTLQPPSAGFVFDQSSQVLRRVQGIPGASLIGAGVDFGFPITAATVSPRMDSVLVVAADATP HLFRVDGVSAVETQVSGLSAPDRVAFSPSGTAAALYSESGVQVIKGLPVAPVVTATIRLRITSKLRRTALDSLAVSDDGA YLLYAAGGPVELVGVAGDSRKLLDAPPGALVAFAPGGHDAAVFHGGILTIFQDLIGAATRRDIQGVSAPSALAFASDGRT LFAASERIRGIYSIEATTGNTSTLSCDCAPTTLITMGSFFRLNELGDGPLWLLDASAAPRLVFVPAKSAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31671; Mature: 31671
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILVSASLAACALYGQTGTLQPPSAGFVFDQSSQVLRRVQGIPGASLIGAGVDFGFPIT CEEEEECCCEEEEEECCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCEEECCCCCCCCEE AATVSPRMDSVLVVAADATPHLFRVDGVSAVETQVSGLSAPDRVAFSPSGTAAALYSESG EEEECCCCCEEEEEEECCCCCEEEECCCHHHHHHHCCCCCCCCEEECCCCCEEEEECCCC VQVIKGLPVAPVVTATIRLRITSKLRRTALDSLAVSDDGAYLLYAAGGPVELVGVAGDSR CHHHHCCCCCCEEEEEEEEEEHHHHHHHHHHHEEECCCCCEEEEECCCCEEEEEECCCCC KLLDAPPGALVAFAPGGHDAAVFHGGILTIFQDLIGAATRRDIQGVSAPSALAFASDGRT EEECCCCCCEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCE LFAASERIRGIYSIEATTGNTSTLSCDCAPTTLITMGSFFRLNELGDGPLWLLDASAAPR EEEEHHHCCEEEEEEEECCCCCEEEECCCCCEEECCCCEEEEECCCCCCEEEEECCCCCE LVFVPAKSAL EEEEECCCCC >Mature Secondary Structure MRILVSASLAACALYGQTGTLQPPSAGFVFDQSSQVLRRVQGIPGASLIGAGVDFGFPIT CEEEEECCCEEEEEECCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCEEECCCCCCCCEE AATVSPRMDSVLVVAADATPHLFRVDGVSAVETQVSGLSAPDRVAFSPSGTAAALYSESG EEEECCCCCEEEEEEECCCCCEEEECCCHHHHHHHCCCCCCCCEEECCCCCEEEEECCCC VQVIKGLPVAPVVTATIRLRITSKLRRTALDSLAVSDDGAYLLYAAGGPVELVGVAGDSR CHHHHCCCCCCEEEEEEEEEEHHHHHHHHHHHEEECCCCCEEEEECCCCEEEEEECCCCC KLLDAPPGALVAFAPGGHDAAVFHGGILTIFQDLIGAATRRDIQGVSAPSALAFASDGRT EEECCCCCCEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCE LFAASERIRGIYSIEATTGNTSTLSCDCAPTTLITMGSFFRLNELGDGPLWLLDASAAPR EEEEHHHCCEEEEEEEECCCCCEEEECCCCCEEECCCCEEEEECCCCCCEEEEECCCCCE LVFVPAKSAL EEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA