| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116619563
Identifier: 116619563
GI number: 116619563
Start: 524922
End: 527195
Strand: Direct
Name: 116619563
Synonym: Acid_0424
Alternate gene names: NA
Gene position: 524922-527195 (Clockwise)
Preceding gene: 116619562
Following gene: 116619566
Centisome position: 5.27
GC content: 61.08
Gene sequence:
>2274_bases TTGCAGTCTACAGCGAAATTTATCCCGCTACTCATGCTCGGCTGCTTCTTGACCTGCTCGTTGACGCATGCCCAGGTAAA TATACTTACGGCCAACGGGAGTAATGACCGCACCAACGCGAACTTACAGGAAACGCAACTTTCCGCGGCTACGGTAAGCG CATTGACCTTTGGCAAGCTCGGTAGCTTTCCGGTGGATGGTCAGGTCTATGCGCAGCCACTGTTCGTCAGCGGTCTTGTA ATCTCAGGCGGAACACACAACGTGGTCTTTGTTTCCACCATGCATAACAGTGTGTATGCGTTCGATGGGGATGCAATGTC TCCGGCCTCGCTGCTCTGGCAGGTGAACCTCGGTCCCTCGGTACCGGCCGCGGTATTGTTCGGGCCATACGGCGATATCT CCAATGAGGTTGGAATTCTCGGGACGGGGGTGATTGATCCCCAGCGTGGAGTGATCTACGTGGTGGCGGACGTCCTCAAT GGCGGCGGCCCGGTGTACTATCTCCACGCGCTTGATCTGGCGACCGGCGCCGAGAGGCTCAACGGTCCCGTTGCGATCTC CGCGACCGTAAGGGGCACGGGGTCGGCCTCGCTCGCCGACGGAACGCTCCCATTCGAAGCGGTACAGCACATTCAGCGTC CGGGCTTGCTTCTGGCCAACAACAGGGTCTATATCAGTTTTGGCTCCCACGGCGATCAATCTCCTTTTCACGGCTGGATG ATGAGTTATGACGCATCGGACGTGAGCCGCCAGGTTGGCGCATATGCCAGTACGCCGAACGGCGACGAAGGCTCTTTCTG GCAATCGGGGCGCGGGCCGGCCGTCGATTCGCAAGGTAACATCTATGCCATCACCGGGAATGGCGATTATGACGGCGTCT CGAACTTCGGCGAGAGTTTCCTGAAGCTGTCGCCCAGTGCAACAGCCGTCGTGGATTCGTTCACGCCTTCCGATTGGAAA TCGCTGTCGGATAATGATTTTGACATTTCGGCGGGCCCGGCCCTGGTTCCGGGCACGCACACCGTGATCGGCGCCGATAA AGGCGGCACACTGTATGTGATCAATGGCGATGCGATGCGCCAGGGAACCGGCGCGACCGTACTCTCCGCATCGACAGGCT CCATCTTCAATTTCGCGGTGTGGGGCCGGGGAGGCCTTGCGAACATATACGTTCAAGGCCAGCGGGAACCACTGAAAAGT TTCCAGATCACAGGGAACAACATCGGCGCCGACCCGGTCTCGATCGCGGCAAATCCGGTTCCTTACTCACGGATTGGCAT GACGCTCTCGGCCAACGGCGGTGCGGACGGTTCCGGTATTCTCTGGGAAAGCACCGGCGATTACAACACGAACACGCCCG GGACGCTTCACGCCTACGACGCCTCCAACCTTGCGAACGAGCTGTGGAACAGCGATATGAACTCCGATCGCGACCAGATG CCGCCGGTCACCAAGTTCGTTTCCCCCACCGTCGCCAACGGAAAGGTCTATGTACCCGGCCTCTCCAACGTGGTGACGGT CTACGGCCTGTTCTCGCCGGCGGGCAACGGGGTGACTGCTCCCTCGATCTCGACGGTATCGAATGCAGCGAGCTATACGC AGGACGCCGTATCACCGGGCGATGTGATTACGATCATGGGATCCAATCTGGGACCATTGGTGCCCCAGGGAGCTCAATTG GACGGCTCGGGAGCAGTTGCCAATACGCTCTCGGACACCCAGGTCATGTTTGACGGCGTTGCCGCCCCGCTGCTCTACGC GGGCGCCGGTCAGATCAACGTCGTGGTGCCATTCGGCGTGACCGGCTCCGCCACCCATATTCAGGTTCAGTACCAGGGCC AGTCATCGGATCCCTTTCCGATGAGCGTTGCGGCGTCCACATTGGGCATCTTCTCGGCCGACGCTTCGGGCCGCGGGCAG GCCGTCATGCTGAATCAGGATGGCAGCCTCAACTCTTCGGACAATCCGGCCCCCGTGGGTTCGATCGTGACGCTGTGGGC CACCGGCGCCGGCCTGCTCTCTCCGGTCGAAGCGGACGGCGCGGTCGTCACCGCGGACAACCTGCCGATTCCTCTCCTAC CCGTCCTTGCGCAGGTCGGCGGAGCCGCGGCCGAGGTATTGTACGCAGGCGGAGCGCCGGGAATGGTCGCCGGTGTCCTC CAGGTAAACTTGCGGATTCCCCGCACGAGCCAGACCGGGACCGCGGTCGCGCTGACGTTGCGCGCCGGAGACAGCACCAG CCAGTCCGGTATCACGCTCTCAGTCCGCCCCTAA
Upstream 100 bases:
>100_bases GCGCTCACTGGGGTGAAACAGGCAGGAACTTTAGGCTGCATATCGGGATCAAGGAATAGGAAGGGTTAAACCAGGTTGTC TCGACCGTCCCGGAGGCCTT
Downstream 100 bases:
>100_bases CTAACGGTAAGGAGCGCTTTCCCCCTTCTTGGCGCCACTTTGCGGCTTTGCGGCTTTGCGAGAAATTGCCGCCCTTGTCC ATGGCGACGCTCGCCACCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 757; Mature: 757
Protein sequence:
>757_residues MQSTAKFIPLLMLGCFLTCSLTHAQVNILTANGSNDRTNANLQETQLSAATVSALTFGKLGSFPVDGQVYAQPLFVSGLV ISGGTHNVVFVSTMHNSVYAFDGDAMSPASLLWQVNLGPSVPAAVLFGPYGDISNEVGILGTGVIDPQRGVIYVVADVLN GGGPVYYLHALDLATGAERLNGPVAISATVRGTGSASLADGTLPFEAVQHIQRPGLLLANNRVYISFGSHGDQSPFHGWM MSYDASDVSRQVGAYASTPNGDEGSFWQSGRGPAVDSQGNIYAITGNGDYDGVSNFGESFLKLSPSATAVVDSFTPSDWK SLSDNDFDISAGPALVPGTHTVIGADKGGTLYVINGDAMRQGTGATVLSASTGSIFNFAVWGRGGLANIYVQGQREPLKS FQITGNNIGADPVSIAANPVPYSRIGMTLSANGGADGSGILWESTGDYNTNTPGTLHAYDASNLANELWNSDMNSDRDQM PPVTKFVSPTVANGKVYVPGLSNVVTVYGLFSPAGNGVTAPSISTVSNAASYTQDAVSPGDVITIMGSNLGPLVPQGAQL DGSGAVANTLSDTQVMFDGVAAPLLYAGAGQINVVVPFGVTGSATHIQVQYQGQSSDPFPMSVAASTLGIFSADASGRGQ AVMLNQDGSLNSSDNPAPVGSIVTLWATGAGLLSPVEADGAVVTADNLPIPLLPVLAQVGGAAAEVLYAGGAPGMVAGVL QVNLRIPRTSQTGTAVALTLRAGDSTSQSGITLSVRP
Sequences:
>Translated_757_residues MQSTAKFIPLLMLGCFLTCSLTHAQVNILTANGSNDRTNANLQETQLSAATVSALTFGKLGSFPVDGQVYAQPLFVSGLV ISGGTHNVVFVSTMHNSVYAFDGDAMSPASLLWQVNLGPSVPAAVLFGPYGDISNEVGILGTGVIDPQRGVIYVVADVLN GGGPVYYLHALDLATGAERLNGPVAISATVRGTGSASLADGTLPFEAVQHIQRPGLLLANNRVYISFGSHGDQSPFHGWM MSYDASDVSRQVGAYASTPNGDEGSFWQSGRGPAVDSQGNIYAITGNGDYDGVSNFGESFLKLSPSATAVVDSFTPSDWK SLSDNDFDISAGPALVPGTHTVIGADKGGTLYVINGDAMRQGTGATVLSASTGSIFNFAVWGRGGLANIYVQGQREPLKS FQITGNNIGADPVSIAANPVPYSRIGMTLSANGGADGSGILWESTGDYNTNTPGTLHAYDASNLANELWNSDMNSDRDQM PPVTKFVSPTVANGKVYVPGLSNVVTVYGLFSPAGNGVTAPSISTVSNAASYTQDAVSPGDVITIMGSNLGPLVPQGAQL DGSGAVANTLSDTQVMFDGVAAPLLYAGAGQINVVVPFGVTGSATHIQVQYQGQSSDPFPMSVAASTLGIFSADASGRGQ AVMLNQDGSLNSSDNPAPVGSIVTLWATGAGLLSPVEADGAVVTADNLPIPLLPVLAQVGGAAAEVLYAGGAPGMVAGVL QVNLRIPRTSQTGTAVALTLRAGDSTSQSGITLSVRP >Mature_757_residues MQSTAKFIPLLMLGCFLTCSLTHAQVNILTANGSNDRTNANLQETQLSAATVSALTFGKLGSFPVDGQVYAQPLFVSGLV ISGGTHNVVFVSTMHNSVYAFDGDAMSPASLLWQVNLGPSVPAAVLFGPYGDISNEVGILGTGVIDPQRGVIYVVADVLN GGGPVYYLHALDLATGAERLNGPVAISATVRGTGSASLADGTLPFEAVQHIQRPGLLLANNRVYISFGSHGDQSPFHGWM MSYDASDVSRQVGAYASTPNGDEGSFWQSGRGPAVDSQGNIYAITGNGDYDGVSNFGESFLKLSPSATAVVDSFTPSDWK SLSDNDFDISAGPALVPGTHTVIGADKGGTLYVINGDAMRQGTGATVLSASTGSIFNFAVWGRGGLANIYVQGQREPLKS FQITGNNIGADPVSIAANPVPYSRIGMTLSANGGADGSGILWESTGDYNTNTPGTLHAYDASNLANELWNSDMNSDRDQM PPVTKFVSPTVANGKVYVPGLSNVVTVYGLFSPAGNGVTAPSISTVSNAASYTQDAVSPGDVITIMGSNLGPLVPQGAQL DGSGAVANTLSDTQVMFDGVAAPLLYAGAGQINVVVPFGVTGSATHIQVQYQGQSSDPFPMSVAASTLGIFSADASGRGQ AVMLNQDGSLNSSDNPAPVGSIVTLWATGAGLLSPVEADGAVVTADNLPIPLLPVLAQVGGAAAEVLYAGGAPGMVAGVL QVNLRIPRTSQTGTAVALTLRAGDSTSQSGITLSVRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77339; Mature: 77339
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: PS00300 SRP54
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSTAKFIPLLMLGCFLTCSLTHAQVNILTANGSNDRTNANLQETQLSAATVSALTFGKL CCCHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHEECCCC GSFPVDGQVYAQPLFVSGLVISGGTHNVVFVSTMHNSVYAFDGDAMSPASLLWQVNLGPS CCCCCCCEEEECEEEEEEEEEECCCCCEEEEEEECCEEEEECCCCCCCCCEEEEEECCCC VPAAVLFGPYGDISNEVGILGTGVIDPQRGVIYVVADVLNGGGPVYYLHALDLATGAERL CCEEEEEECCCCCCCCCCEEEECCCCCCCCEEEEEEEHHCCCCCEEEEEEEEHHCCHHHC NGPVAISATVRGTGSASLADGTLPFEAVQHIQRPGLLLANNRVYISFGSHGDQSPFHGWM CCCEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCEEEECCEEEEEECCCCCCCCCCCEE MSYDASDVSRQVGAYASTPNGDEGSFWQSGRGPAVDSQGNIYAITGNGDYDGVSNFGESF EEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHH LKLSPSATAVVDSFTPSDWKSLSDNDFDISAGPALVPGTHTVIGADKGGTLYVINGDAMR EEECCCCEEEEECCCCCHHHCCCCCCCEECCCCEECCCCEEEEECCCCCEEEEECCCCCC QGTGATVLSASTGSIFNFAVWGRGGLANIYVQGQREPLKSFQITGNNIGADPVSIAANPV CCCCCEEEEECCCCEEEEEEECCCCEEEEEEECCCCCCCEEEEECCCCCCCCEEEECCCC PYSRIGMTLSANGGADGSGILWESTGDYNTNTPGTLHAYDASNLANELWNSDMNSDRDQM CHHHEEEEEECCCCCCCCCEEEECCCCCCCCCCCEEEEECHHHHHHHHHCCCCCCCHHHC PPVTKFVSPTVANGKVYVPGLSNVVTVYGLFSPAGNGVTAPSISTVSNAASYTQDAVSPG CCHHHHCCCEECCCEEEECCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCC DVITIMGSNLGPLVPQGAQLDGSGAVANTLSDTQVMFDGVAAPLLYAGAGQINVVVPFGV CEEEEECCCCCCCCCCCCEECCCCCEECCCCCCHHHHHHHHHHHEEECCCEEEEEEEECC TGSATHIQVQYQGQSSDPFPMSVAASTLGIFSADASGRGQAVMLNQDGSLNSSDNPAPVG CCCEEEEEEEECCCCCCCCCHHHHHHHHEEEECCCCCCCCEEEEECCCCCCCCCCCCCCC SIVTLWATGAGLLSPVEADGAVVTADNLPIPLLPVLAQVGGAAAEVLYAGGAPGMVAGVL CEEEEEECCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCEEEEEEECCCCCCEEEEE QVNLRIPRTSQTGTAVALTLRAGDSTSQSGITLSVRP EEEEECCCCCCCCCEEEEEEECCCCCCCCCEEEEECC >Mature Secondary Structure MQSTAKFIPLLMLGCFLTCSLTHAQVNILTANGSNDRTNANLQETQLSAATVSALTFGKL CCCHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHEECCCC GSFPVDGQVYAQPLFVSGLVISGGTHNVVFVSTMHNSVYAFDGDAMSPASLLWQVNLGPS CCCCCCCEEEECEEEEEEEEEECCCCCEEEEEEECCEEEEECCCCCCCCCEEEEEECCCC VPAAVLFGPYGDISNEVGILGTGVIDPQRGVIYVVADVLNGGGPVYYLHALDLATGAERL CCEEEEEECCCCCCCCCCEEEECCCCCCCCEEEEEEEHHCCCCCEEEEEEEEHHCCHHHC NGPVAISATVRGTGSASLADGTLPFEAVQHIQRPGLLLANNRVYISFGSHGDQSPFHGWM CCCEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCEEEECCEEEEEECCCCCCCCCCCEE MSYDASDVSRQVGAYASTPNGDEGSFWQSGRGPAVDSQGNIYAITGNGDYDGVSNFGESF EEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHH LKLSPSATAVVDSFTPSDWKSLSDNDFDISAGPALVPGTHTVIGADKGGTLYVINGDAMR EEECCCCEEEEECCCCCHHHCCCCCCCEECCCCEECCCCEEEEECCCCCEEEEECCCCCC QGTGATVLSASTGSIFNFAVWGRGGLANIYVQGQREPLKSFQITGNNIGADPVSIAANPV CCCCCEEEEECCCCEEEEEEECCCCEEEEEEECCCCCCCEEEEECCCCCCCCEEEECCCC PYSRIGMTLSANGGADGSGILWESTGDYNTNTPGTLHAYDASNLANELWNSDMNSDRDQM CHHHEEEEEECCCCCCCCCEEEECCCCCCCCCCCEEEEECHHHHHHHHHCCCCCCCHHHC PPVTKFVSPTVANGKVYVPGLSNVVTVYGLFSPAGNGVTAPSISTVSNAASYTQDAVSPG CCHHHHCCCEECCCEEEECCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCC DVITIMGSNLGPLVPQGAQLDGSGAVANTLSDTQVMFDGVAAPLLYAGAGQINVVVPFGV CEEEEECCCCCCCCCCCCEECCCCCEECCCCCCHHHHHHHHHHHEEECCCEEEEEEEECC TGSATHIQVQYQGQSSDPFPMSVAASTLGIFSADASGRGQAVMLNQDGSLNSSDNPAPVG CCCEEEEEEEECCCCCCCCCHHHHHHHHEEEECCCCCCCCEEEEECCCCCCCCCCCCCCC SIVTLWATGAGLLSPVEADGAVVTADNLPIPLLPVLAQVGGAAAEVLYAGGAPGMVAGVL CEEEEEECCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCEEEEEEECCCCCCEEEEE QVNLRIPRTSQTGTAVALTLRAGDSTSQSGITLSVRP EEEEECCCCCCCCCEEEEEEECCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA