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The map label for this gene is allC [C]

Identifier: 116619505

GI number: 116619505

Start: 464250

End: 465491

Strand: Direct

Name: allC [C]

Synonym: Acid_0364

Alternate gene names: 116619505

Gene position: 464250-465491 (Clockwise)

Preceding gene: 116619504

Following gene: 116619506

Centisome position: 4.66

GC content: 67.55

Gene sequence:

>1242_bases
ATGAACTTCCCGATCGATGGCGAACGGCTCTCGCGGGAGTTGGAGCAACTCGCCGGGATCTCCGAAATGACGCCGCCGGC
AGTCACACGCGTGGTGTTCTCGCCGGCCGACCTGCGCGCGCGGGAGTACGTCGACGGACTGTGCAGGGAGGCAGGCCTCG
CGCTGCGCAGCGACGCGGTGGGCAACACGTTCGCCCGCTGGAATGGCGATGCGGCGGAACTGGCGGCGATCGGCACGGGC
TCGCACATTGATGCCATTCCGAACGCGGGCAGCTACGATGGCACGGTCGGCGTGCTCGGCGGGTTGGAGGCGATCCGGGC
CTTGCAGCGCGGCGGGTTTCATCCGCGGCGGTCAATCGAGCTCTTGATCTTTACCGCCGAAGAGCCGACGCGATTCGGTA
TCGGTTGCCTCGGCAGCCGCTTTCTGGCCGGTCTTTCGGCGATGGCCGGAGAGAGCCTGCGCGATGCGCGGGGTCAGACG
CTCAACCAGGTGCGCGAAGCCGCGGGATTCACGGGCTCGCTCGAAGGTACGCGGCTGCCCGCCGGATACTACTCCGCGTT
CGTCGAATTGCACATCGAACAAGGACCGCTGCTGGAGCGCGCGGGAGTGCCGGTCGGCGTCGTGACCGCGATCGCGGCGC
CGGCGGCGCTGCGCTTGAGGATCGAAGGCGAGGGCGGACATGCCGGCGCGGTGTTGATGCCGGATCGCCACGATGCCTTC
CTGGCCGCGGCCGAGATCGCGCTCGCTCTGGAAAAGGCGGCGCGCAGCAGCGGGGCGATCGACACGGTTGCGACCACCGG
TATGTGCGAGGTCTTTCCCGGTGCGATCAACAGCATTCCGAGCCGCGTACAGATGACGGTGGATGTTCGCGATACCGACG
AGTCGCGGCGCGACCGTGTGCTGCGGCAACTAGCGCAGGCGATACCCGAAACGGCGGAACGCCGCGGCGTGCGTATCGAA
GAGGAGATCATTAGCGTGGATGCGCCGGCGGTCTGCGATCCTCAAGTCGTCGGCGTGCTGGAAGAGGCGTGCAGGACGCA
ACGGCTCGCGTACCAGAAGATGGTCAGCCGCGCGTATCACGACTCGCTGTTCGTTTCGCGCTTCGCTCCCACCGCCATGC
TGTTTATCCCGTGCCGCGGCGGGGTCAGCCACCGTCCCGACGAGTACGCCTCGCCGGAAGCGATTGCCGGCGGCGCGGCG
GTCCTGGCGGAAGCGCTCGCCAAGCTCAGCCTGCTATCTTAG

Upstream 100 bases:

>100_bases
TGGGCCCCTACTGCCCGCAGTGGTTCGGCGCGCTCGGCAAGGTGCCGGCGAAATACCTGATCTACAAAGATTGGAACCGC
CACCCGGGCGGTGCGGTGAT

Downstream 100 bases:

>100_bases
GTAGTCCAATGAGCGACGTAATCAACGAATATCAAAAGTGGAAACAGCAGGGGGAAGATCTGCGCATCCAGGCGAAGACC
GCGATGGAAGCGCGCTTCCG

Product: amidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MNFPIDGERLSRELEQLAGISEMTPPAVTRVVFSPADLRAREYVDGLCREAGLALRSDAVGNTFARWNGDAAELAAIGTG
SHIDAIPNAGSYDGTVGVLGGLEAIRALQRGGFHPRRSIELLIFTAEEPTRFGIGCLGSRFLAGLSAMAGESLRDARGQT
LNQVREAAGFTGSLEGTRLPAGYYSAFVELHIEQGPLLERAGVPVGVVTAIAAPAALRLRIEGEGGHAGAVLMPDRHDAF
LAAAEIALALEKAARSSGAIDTVATTGMCEVFPGAINSIPSRVQMTVDVRDTDESRRDRVLRQLAQAIPETAERRGVRIE
EEIISVDAPAVCDPQVVGVLEEACRTQRLAYQKMVSRAYHDSLFVSRFAPTAMLFIPCRGGVSHRPDEYASPEAIAGGAA
VLAEALAKLSLLS

Sequences:

>Translated_413_residues
MNFPIDGERLSRELEQLAGISEMTPPAVTRVVFSPADLRAREYVDGLCREAGLALRSDAVGNTFARWNGDAAELAAIGTG
SHIDAIPNAGSYDGTVGVLGGLEAIRALQRGGFHPRRSIELLIFTAEEPTRFGIGCLGSRFLAGLSAMAGESLRDARGQT
LNQVREAAGFTGSLEGTRLPAGYYSAFVELHIEQGPLLERAGVPVGVVTAIAAPAALRLRIEGEGGHAGAVLMPDRHDAF
LAAAEIALALEKAARSSGAIDTVATTGMCEVFPGAINSIPSRVQMTVDVRDTDESRRDRVLRQLAQAIPETAERRGVRIE
EEIISVDAPAVCDPQVVGVLEEACRTQRLAYQKMVSRAYHDSLFVSRFAPTAMLFIPCRGGVSHRPDEYASPEAIAGGAA
VLAEALAKLSLLS
>Mature_413_residues
MNFPIDGERLSRELEQLAGISEMTPPAVTRVVFSPADLRAREYVDGLCREAGLALRSDAVGNTFARWNGDAAELAAIGTG
SHIDAIPNAGSYDGTVGVLGGLEAIRALQRGGFHPRRSIELLIFTAEEPTRFGIGCLGSRFLAGLSAMAGESLRDARGQT
LNQVREAAGFTGSLEGTRLPAGYYSAFVELHIEQGPLLERAGVPVGVVTAIAAPAALRLRIEGEGGHAGAVLMPDRHDAF
LAAAEIALALEKAARSSGAIDTVATTGMCEVFPGAINSIPSRVQMTVDVRDTDESRRDRVLRQLAQAIPETAERRGVRIE
EEIISVDAPAVCDPQVVGVLEEACRTQRLAYQKMVSRAYHDSLFVSRFAPTAMLFIPCRGGVSHRPDEYASPEAIAGGAA
VLAEALAKLSLLS

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=387, Percent_Identity=32.5581395348837, Blast_Score=187, Evalue=9e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR001261
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: 3.5.3.- [C]

Molecular weight: Translated: 43770; Mature: 43770

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFPIDGERLSRELEQLAGISEMTPPAVTRVVFSPADLRAREYVDGLCREAGLALRSDAV
CCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHEECCHHHHHHHHHHHHHHHHCCHHHCCCC
GNTFARWNGDAAELAAIGTGSHIDAIPNAGSYDGTVGVLGGLEAIRALQRGGFHPRRSIE
CCCHHHCCCCHHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE
LLIFTAEEPTRFGIGCLGSRFLAGLSAMAGESLRDARGQTLNQVREAAGFTGSLEGTRLP
EEEEECCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHCCCCCCCCCCCC
AGYYSAFVELHIEQGPLLERAGVPVGVVTAIAAPAALRLRIEGEGGHAGAVLMPDRHDAF
HHHHHHHHHEEECCCCCHHHCCCCHHHHHHHHCCEEEEEEEECCCCCCCEEECCCCCHHH
LAAAEIALALEKAARSSGAIDTVATTGMCEVFPGAINSIPSRVQMTVDVRDTDESRRDRV
HHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHCCHHHHCCCCCEEEEEEECCCCHHHHHHH
LRQLAQAIPETAERRGVRIEEEIISVDAPAVCDPQVVGVLEEACRTQRLAYQKMVSRAYH
HHHHHHHHHHHHHHCCCEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DSLFVSRFAPTAMLFIPCRGGVSHRPDEYASPEAIAGGAAVLAEALAKLSLLS
HHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNFPIDGERLSRELEQLAGISEMTPPAVTRVVFSPADLRAREYVDGLCREAGLALRSDAV
CCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHEECCHHHHHHHHHHHHHHHHCCHHHCCCC
GNTFARWNGDAAELAAIGTGSHIDAIPNAGSYDGTVGVLGGLEAIRALQRGGFHPRRSIE
CCCHHHCCCCHHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE
LLIFTAEEPTRFGIGCLGSRFLAGLSAMAGESLRDARGQTLNQVREAAGFTGSLEGTRLP
EEEEECCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHCCCCCCCCCCCC
AGYYSAFVELHIEQGPLLERAGVPVGVVTAIAAPAALRLRIEGEGGHAGAVLMPDRHDAF
HHHHHHHHHEEECCCCCHHHCCCCHHHHHHHHCCEEEEEEEECCCCCCCEEECCCCCHHH
LAAAEIALALEKAARSSGAIDTVATTGMCEVFPGAINSIPSRVQMTVDVRDTDESRRDRV
HHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHCCHHHHCCCCCEEEEEEECCCCHHHHHHH
LRQLAQAIPETAERRGVRIEEEIISVDAPAVCDPQVVGVLEEACRTQRLAYQKMVSRAYH
HHHHHHHHHHHHHHCCCEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DSLFVSRFAPTAMLFIPCRGGVSHRPDEYASPEAIAGGAAVLAEALAKLSLLS
HHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]