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The map label for this gene is ylbA [H]

Identifier: 116619504

GI number: 116619504

Start: 463522

End: 464253

Strand: Direct

Name: ylbA [H]

Synonym: Acid_0363

Alternate gene names: 116619504

Gene position: 463522-464253 (Clockwise)

Preceding gene: 116619503

Following gene: 116619505

Centisome position: 4.65

GC content: 66.67

Gene sequence:

>732_bases
ATGCAACGTCTGGGATTCACCCGTAGCGCGCACCGCTCCGACCATTTGCTGCTCACGCCGGACACCTTCGTCCGCGCGCC
CCTGCCCGGCATGACTGGCGCCACCGCCATCGTGCACGCGGCTCCGGCGCTGGGCACGGCGTTCACGCAGTACACCGCGG
AATTCGAGCCTGGCGGCAGCCTGGGACCGGCATACGGGCAGCGCTTCGTCTATGTGCTCGACGGCGTCATTAATGCCGCG
GGACGCACGCTCTCGGCGGACGACTATTGTTACCTGCCCACCGGCGCCGGCACCGAGGTGGTCGCGCAAGGCAAGGCCCG
CGCCTCCGTGATCGAGCGGCCGTATCAGCGGCTGGCCGGCAGGGTCGAGCCGGCGATACTGAGCGGAAGTGAGCGCGCCA
TCGCGCCGAAGCCGCTGCTGGACGATGCCGATATCGAAGTCCGCTGCCTGCTGACCGACGATTTTGCTTTCGACTTCGCG
GTCAACACGATGACCTATCAGCCGGGCGCGGTGCTGCCCATGGTGGAGATCCACGTGATGGAGCACGGGCTCGTCATGCT
CTCAGGCGGCGGCATCTACCGGCTCGGCGATTGCTGGTATCCGGTCACGGCGGGCGACTTCATCTGGATGGGCCCCTACT
GCCCGCAGTGGTTCGGCGCGCTCGGCAAGGTGCCGGCGAAATACCTGATCTACAAAGATTGGAACCGCCACCCGGGCGGT
GCGGTGATATGA

Upstream 100 bases:

>100_bases
TCGATTCGCCGCACGATGCTGCGCGGCACGACGATTTTCAATCATGACGAAATTACCGTAAAGTCCGGCGGCCAACTGCT
CCGCCCGAAAGCAAACACCT

Downstream 100 bases:

>100_bases
ACTTCCCGATCGATGGCGAACGGCTCTCGCGGGAGTTGGAGCAACTCGCCGGGATCTCCGAAATGACGCCGCCGGCAGTC
ACACGCGTGGTGTTCTCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MQRLGFTRSAHRSDHLLLTPDTFVRAPLPGMTGATAIVHAAPALGTAFTQYTAEFEPGGSLGPAYGQRFVYVLDGVINAA
GRTLSADDYCYLPTGAGTEVVAQGKARASVIERPYQRLAGRVEPAILSGSERAIAPKPLLDDADIEVRCLLTDDFAFDFA
VNTMTYQPGAVLPMVEIHVMEHGLVMLSGGGIYRLGDCWYPVTAGDFIWMGPYCPQWFGALGKVPAKYLIYKDWNRHPGG
AVI

Sequences:

>Translated_243_residues
MQRLGFTRSAHRSDHLLLTPDTFVRAPLPGMTGATAIVHAAPALGTAFTQYTAEFEPGGSLGPAYGQRFVYVLDGVINAA
GRTLSADDYCYLPTGAGTEVVAQGKARASVIERPYQRLAGRVEPAILSGSERAIAPKPLLDDADIEVRCLLTDDFAFDFA
VNTMTYQPGAVLPMVEIHVMEHGLVMLSGGGIYRLGDCWYPVTAGDFIWMGPYCPQWFGALGKVPAKYLIYKDWNRHPGG
AVI
>Mature_243_residues
MQRLGFTRSAHRSDHLLLTPDTFVRAPLPGMTGATAIVHAAPALGTAFTQYTAEFEPGGSLGPAYGQRFVYVLDGVINAA
GRTLSADDYCYLPTGAGTEVVAQGKARASVIERPYQRLAGRVEPAILSGSERAIAPKPLLDDADIEVRCLLTDDFAFDFA
VNTMTYQPGAVLPMVEIHVMEHGLVMLSGGGIYRLGDCWYPVTAGDFIWMGPYCPQWFGALGKVPAKYLIYKDWNRHPGG
AVI

Specific function: Unknown

COG id: COG3257

COG function: function code R; Uncharacterized protein, possibly involved in glyoxylate utilization

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786725, Length=231, Percent_Identity=33.3333333333333, Blast_Score=100, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017627
- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR008579
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2; PF05899 Cupin_3 [H]

EC number: NA

Molecular weight: Translated: 26268; Mature: 26268

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRLGFTRSAHRSDHLLLTPDTFVRAPLPGMTGATAIVHAAPALGTAFTQYTAEFEPGGS
CCCCCCCCCCCCCCCEEECCCHHEECCCCCCCCCHHHHHCCCHHHHHHHHEEEEECCCCC
LGPAYGQRFVYVLDGVINAAGRTLSADDYCYLPTGAGTEVVAQGKARASVIERPYQRLAG
CCHHHHCEEEEEHHHHHHHCCCEECCCCEEEECCCCCCCEEECCCHHHHHHHHHHHHHHC
RVEPAILSGSERAIAPKPLLDDADIEVRCLLTDDFAFDFAVNTMTYQPGAVLPMVEIHVM
CCCCEEECCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEEEECCCCCCCEEEEEEE
EHGLVMLSGGGIYRLGDCWYPVTAGDFIWMGPYCPQWFGALGKVPAKYLIYKDWNRHPGG
ECCEEEEECCCEEEECCEEEECCCCCEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCC
AVI
CCC
>Mature Secondary Structure
MQRLGFTRSAHRSDHLLLTPDTFVRAPLPGMTGATAIVHAAPALGTAFTQYTAEFEPGGS
CCCCCCCCCCCCCCCEEECCCHHEECCCCCCCCCHHHHHCCCHHHHHHHHEEEEECCCCC
LGPAYGQRFVYVLDGVINAAGRTLSADDYCYLPTGAGTEVVAQGKARASVIERPYQRLAG
CCHHHHCEEEEEHHHHHHHCCCEECCCCEEEECCCCCCCEEECCCHHHHHHHHHHHHHHC
RVEPAILSGSERAIAPKPLLDDADIEVRCLLTDDFAFDFAVNTMTYQPGAVLPMVEIHVM
CCCCEEECCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEEEECCCCCCCEEEEEEE
EHGLVMLSGGGIYRLGDCWYPVTAGDFIWMGPYCPQWFGALGKVPAKYLIYKDWNRHPGG
ECCEEEEECCCEEEECCEEEECCCCCEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCC
AVI
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10601204; 9278503 [H]