| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is acoA [H]
Identifier: 116619493
GI number: 116619493
Start: 451072
End: 452094
Strand: Direct
Name: acoA [H]
Synonym: Acid_0352
Alternate gene names: 116619493
Gene position: 451072-452094 (Clockwise)
Preceding gene: 116619489
Following gene: 116619494
Centisome position: 4.53
GC content: 63.83
Gene sequence:
>1023_bases ATGAGCGCTGTCGAAGCTACGGGTGCGGCAACACATAACGCGTCCTCGGCGGCCGGCAGTCTACAGGCCGAACTCGCCCA CAAGTGTCTCTACTACATGCTGCTCATGCGCGAAGTCGAAGATCGCATCGAGCGCAAGCTCTATCGCCAGGGAAAAATCC TCGGCGGCGTTTACGTCGGCCGCGGCCAGGAAGCCATCCCGGTCGGTAGCGCCCTCGTCGCCGTCCCCGAGGACGTCATG TTCCCCTCCCACCGCGACATGGCCGTCTTCTTCATCCGCGGAGTCTCCGCCCGCCGCGTCCTCGCTCAATATATGGGACG CCTCGGTGGACTCACCCGCGGACGCGACGGCAACATGCACATGGGCGATATGAGCGTCAACGTCGTGTCCATCATCAGCG CCCTCGCAGCCACCGTCCCGGTCGCCACCGGCGCCGCCCTCGCCATGCGCTACAAGGGAATCCCCGGCGTCGCCTTCAGC TACTTCGGCGATGGCTCCACCAGCCGCGGCGATTGGCACGAAGGCGTCAATTTCGCCAGCGTCCAGAAGCTCCCCGTCGT CTTCATCTGCAACAACAACCAGTACGCGTATTCCACGCCCCTCCATCTCCAAATGGCCTGCGCCAACGTCGCCGATCGCG GCCCCGCCTACAACATGCCCGCCGAAATCGTCGATGGAAATGACGTGCTCGCCGTTTACGAAGCCACTCAGCGCGCTGTC ACCCACGCCCGCGGCGGCCTCGGCCCCTACCTGCTCGAGTGCAAGACTTTTCGCATGACAGGACACTCCGCACACGACGC CGCCACCTACGTTCCCAAGGGCCTCTTTGAGGAATGGGGCAAGCTCGACCCCATCGTCCGCCTCGAAAAACGCATGCTCG AGGAACGCTGGTCGCTCCAGGAAGAAATCGACGAGCTTCACGCCGCCGTCATCCGCGAAGTGGATGACGCTGTCGCCTGG GCCGAGCAGAGTCCCTACCCCGACGCCGCCAGCCTGCTTGACGACGTTTACGAGAACCAATAG
Upstream 100 bases:
>100_bases AGCGATCTCTCCATCGTTCTTTTGCGCGTAAGCATCCGCACCCCTTGCGCCTGCACCGCTGGTATACTACCCGTTGAACC CCAAGTTAGAGGTAATCCCC
Downstream 100 bases:
>100_bases CCCATGTCCACCACGTACCTCGAAGCAATCCGCGAAGGCCTCTGGGAAGAGATGGAGCGCGATCCCAACGTCTTCTGCAT CGGTGAGGACATCGGCGAAT
Product: pyruvate dehydrogenase
Products: [dihydrolipoyllysine-residue acetyltransferase] ; $S-acetyldihydrolipoyllysine; CO2
Alternate protein names: Acetoin:DCPIP oxidoreductase-alpha; Ao:DCPIP OR; TPP-dependent acetoin dehydrogenase E1 subunit alpha [H]
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MSAVEATGAATHNASSAAGSLQAELAHKCLYYMLLMREVEDRIERKLYRQGKILGGVYVGRGQEAIPVGSALVAVPEDVM FPSHRDMAVFFIRGVSARRVLAQYMGRLGGLTRGRDGNMHMGDMSVNVVSIISALAATVPVATGAALAMRYKGIPGVAFS YFGDGSTSRGDWHEGVNFASVQKLPVVFICNNNQYAYSTPLHLQMACANVADRGPAYNMPAEIVDGNDVLAVYEATQRAV THARGGLGPYLLECKTFRMTGHSAHDAATYVPKGLFEEWGKLDPIVRLEKRMLEERWSLQEEIDELHAAVIREVDDAVAW AEQSPYPDAASLLDDVYENQ
Sequences:
>Translated_340_residues MSAVEATGAATHNASSAAGSLQAELAHKCLYYMLLMREVEDRIERKLYRQGKILGGVYVGRGQEAIPVGSALVAVPEDVM FPSHRDMAVFFIRGVSARRVLAQYMGRLGGLTRGRDGNMHMGDMSVNVVSIISALAATVPVATGAALAMRYKGIPGVAFS YFGDGSTSRGDWHEGVNFASVQKLPVVFICNNNQYAYSTPLHLQMACANVADRGPAYNMPAEIVDGNDVLAVYEATQRAV THARGGLGPYLLECKTFRMTGHSAHDAATYVPKGLFEEWGKLDPIVRLEKRMLEERWSLQEEIDELHAAVIREVDDAVAW AEQSPYPDAASLLDDVYENQ >Mature_339_residues SAVEATGAATHNASSAAGSLQAELAHKCLYYMLLMREVEDRIERKLYRQGKILGGVYVGRGQEAIPVGSALVAVPEDVMF PSHRDMAVFFIRGVSARRVLAQYMGRLGGLTRGRDGNMHMGDMSVNVVSIISALAATVPVATGAALAMRYKGIPGVAFSY FGDGSTSRGDWHEGVNFASVQKLPVVFICNNNQYAYSTPLHLQMACANVADRGPAYNMPAEIVDGNDVLAVYEATQRAVT HARGGLGPYLLECKTFRMTGHSAHDAATYVPKGLFEEWGKLDPIVRLEKRMLEERWSLQEEIDELHAAVIREVDDAVAWA EQSPYPDAASLLDDVYENQ
Specific function: Catalyzes the 2,6-dichlorophenolindophenol-dependent cleavage of acetoin into acetate and acetaldehyde. The alpha subunit is probably the catalytic subunit of the enzyme [H]
COG id: COG1071
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4885543, Length=313, Percent_Identity=36.741214057508, Blast_Score=185, Evalue=5e-47, Organism=Homo sapiens, GI11386135, Length=311, Percent_Identity=35.6913183279743, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI258645172, Length=311, Percent_Identity=35.6913183279743, Blast_Score=167, Evalue=1e-41, Organism=Homo sapiens, GI4505685, Length=315, Percent_Identity=35.5555555555556, Blast_Score=158, Evalue=7e-39, Organism=Homo sapiens, GI291084742, Length=315, Percent_Identity=35.5555555555556, Blast_Score=158, Evalue=7e-39, Organism=Homo sapiens, GI291084744, Length=322, Percent_Identity=34.1614906832298, Blast_Score=152, Evalue=4e-37, Organism=Homo sapiens, GI291084757, Length=315, Percent_Identity=32.0634920634921, Blast_Score=121, Evalue=7e-28, Organism=Caenorhabditis elegans, GI86563355, Length=312, Percent_Identity=35.8974358974359, Blast_Score=175, Evalue=3e-44, Organism=Caenorhabditis elegans, GI86563357, Length=312, Percent_Identity=35.8974358974359, Blast_Score=175, Evalue=3e-44, Organism=Caenorhabditis elegans, GI17536047, Length=329, Percent_Identity=31.306990881459, Blast_Score=151, Evalue=5e-37, Organism=Caenorhabditis elegans, GI32564172, Length=329, Percent_Identity=31.306990881459, Blast_Score=150, Evalue=7e-37, Organism=Saccharomyces cerevisiae, GI6321026, Length=312, Percent_Identity=33.3333333333333, Blast_Score=153, Evalue=3e-38, Organism=Drosophila melanogaster, GI24639746, Length=297, Percent_Identity=33.6700336700337, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI24639740, Length=297, Percent_Identity=33.6700336700337, Blast_Score=149, Evalue=2e-36, Organism=Drosophila melanogaster, GI24639744, Length=318, Percent_Identity=33.0188679245283, Blast_Score=149, Evalue=2e-36, Organism=Drosophila melanogaster, GI28571106, Length=318, Percent_Identity=33.0188679245283, Blast_Score=149, Evalue=2e-36, Organism=Drosophila melanogaster, GI21355903, Length=322, Percent_Identity=31.3664596273292, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI24639748, Length=307, Percent_Identity=31.9218241042345, Blast_Score=131, Evalue=7e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001017 [H]
Pfam domain/function: PF00676 E1_dh [H]
EC number: 1.2.4.1
Molecular weight: Translated: 37088; Mature: 36956
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVEATGAATHNASSAAGSLQAELAHKCLYYMLLMREVEDRIERKLYRQGKILGGVYVG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEC RGQEAIPVGSALVAVPEDVMFPSHRDMAVFFIRGVSARRVLAQYMGRLGGLTRGRDGNMH CCCCCCCCCCCCEECCHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCEE MGDMSVNVVSIISALAATVPVATGAALAMRYKGIPGVAFSYFGDGSTSRGDWHEGVNFAS ECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEECCCCCCCCCCHHHCCCHHE VQKLPVVFICNNNQYAYSTPLHLQMACANVADRGPAYNMPAEIVDGNDVLAVYEATQRAV ECCCCEEEEECCCCEEEECCCCHHHHHHHHHCCCCCCCCCCEEECCCCEEEEHHHHHHHH THARGGLGPYLLECKTFRMTGHSAHDAATYVPKGLFEEWGKLDPIVRLEKRMLEERWSLQ HHHCCCCCCHHHEEEEEEECCCCCCHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH EEIDELHAAVIREVDDAVAWAEQSPYPDAASLLDDVYENQ HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure SAVEATGAATHNASSAAGSLQAELAHKCLYYMLLMREVEDRIERKLYRQGKILGGVYVG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEC RGQEAIPVGSALVAVPEDVMFPSHRDMAVFFIRGVSARRVLAQYMGRLGGLTRGRDGNMH CCCCCCCCCCCCEECCHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCEE MGDMSVNVVSIISALAATVPVATGAALAMRYKGIPGVAFSYFGDGSTSRGDWHEGVNFAS ECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEECCCCCCCCCCHHHCCCHHE VQKLPVVFICNNNQYAYSTPLHLQMACANVADRGPAYNMPAEIVDGNDVLAVYEATQRAV ECCCCEEEEECCCCEEEECCCCHHHHHHHHHCCCCCCCCCCEEECCCCEEEEHHHHHHHH THARGGLGPYLLECKTFRMTGHSAHDAATYVPKGLFEEWGKLDPIVRLEKRMLEERWSLQ HHHCCCCCCHHHEEEEEEECCCCCCHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH EEIDELHAAVIREVDDAVAWAEQSPYPDAASLLDDVYENQ HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: pyruvate; [dihydrolipoyllysine-residue acetyltransferase] lipoyllysine
Specific reaction: pyruvate + [dihydrolipoyllysine-residue acetyltransferase] lipoyllysine = [dihydrolipoyllysine-residue acetyltransferase] S- $acetyldihydrolipoyllysine + CO2
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969503; 10368162; 9384377 [H]