| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116619408
Identifier: 116619408
GI number: 116619408
Start: 353595
End: 355637
Strand: Direct
Name: 116619408
Synonym: Acid_0267
Alternate gene names: NA
Gene position: 353595-355637 (Clockwise)
Preceding gene: 116619407
Following gene: 116619409
Centisome position: 3.55
GC content: 62.7
Gene sequence:
>2043_bases ATGGCTTTTTCCCGCCGTACTTTTCTGGGCGCCGTCCCGGCGGCATTGGCTGCGCAAACGGCGGCTTCCAAGATCGATCG CCGTGCTGTGGTCGAGCGGCACAATCCCGCGCTGAATGGGTTTAACCCGCGTTCGCCGCTCTCCGTGGGTAATGGGGAAT TTGCATTCACAGCCGATCCCACCGGATTACAGACTTTTCCGGAGCTTTATGACAACCAGATGCCGCTCTGCACGCAGGCG CAGTGGGCCTGGCACACGTCTCCCAATACCACGGACAAGAGGCCCGAAGATCTCCGGCTGACGGAGTTCGAAACGTTCGG GCGCAAGGTCGGCTACCCGACCAGTTCAAGCGGACAGGCCGAACTCTTCAACTGGCTGCGCGAGAATCCGCACCGGTTGC ACCTGGGGCGCATCGGTTTCGCGATCGCGAAACCGGAGGATGTCCGGATTGTTCAGCAGCGCCTTGACCTGTGGAGCGGC GTGCTGCACAGCGAGTTTGAATATGCCGGCAACACGATCTCGGTGGAGACGTGCTGTCATCCCATGCTGGACGTGATCGC GGTTCGTGTGCAGGGGCGGGTTCCACTGGCTTTCGAGTTCCCCTACGCCTCGGGAGCGATGAACGCGGCGGATTGGTCGC ACCAGGAGAAGCACTCCACGAAGGCGAAGCTCACCGCCAATCGCGCGGAAATCGATCGCCGGCTCGATGCCGATACGTAT ACGGTCACGATCGGCTGGCCTGGCGCGCCGGCGGTCATGGAGCAGCCGGGCGCGCATCGCCTGGTGCTGACTCCGCAATC CGGCAGTCTGCAATTCTATGCGGCATTTCAAAAGGCCGCTCACGGCAGCACGACTTCCGATGCGGTCTTCGCCGCATCAC GTGCTCACTGGCAGAACTTCTGGATGTCGGGCGCGGCAATCGATCTTTCGGCCGCCGCCGATCCGCGTGCGAAGGAACTC GAGCGCCGCATCGTTCTTTCCCAATACGTCACCGCGATCCAGTGCTCCGGCACGCTGCCGCCGCAGGAGACGGGGCTCAC CTGCAATAGCTGGTACGGCAAGTTCCATCTGGAGATGCACTACTGGCACGCCGCGCACTTCGCTACTTGGGACCGCCCGG CGCTGCTGGAGCGCAGCCTGGATTGGTACAACCGGATTCTGCCCAGTGCGCGCGATAAGGCCAAGCAGCAGGGCTACGCA GGAGTGCGCTGGCCGAAGATGACGGCGCCGGATGGGCGCGACAGCCCGTCGAACATCGGCCCGTTGCTGATCTGGCAGCA GCCGCACCCGATCGCGATGGCGGAGCTGATCTATGCCGCCAACCCGACCAGTGAAACTCTCGGCAAGTACCGTGAGATAG TTTTCCAATCCGCCGAGTTCATGGCCTCCTACGCGCACTTCGATGCGAAAAGCGGCCGCTACGTGCTCGGGCCGCCGGTG ATTCCGGCACAGGAGAATCACCCGGCGCGGGAGACCTGGAACCCCACCTTCGAATTGGAATATTGGGATTATGCGCTCGG CATCGCGCAGCAGTGGCGCGAGCGCTTGGGACTTGCGCGCAATCCACGATGGGATGACATACGCGCTAAACTTTCGCCGC TGCCCGTGAAGGACGGTGTCTACCTGGCTCACGAGAACTGTCCGCAGACGTTCACGGAGCGCAATCACGATCATCCCTCG ATGCTGGGGGCGCTGGGAGTGCTGCCGGGCAGGAAGGTCGATCGGGAGGCCATGCGCCGGACACTGAAAAAAGTTTTTGC CGAATGGAAGTGGGCAGCTACGTGGGGCTGGGACTTTCCGATGGTGGCGATGACCGCCGCCGCCCTCAACGAGCCGGCGC TGGCGATCGATGCGCTATTTGTAGACAGCCCGAAAAATACGTGGCTGCCAAACGGTCATAACTGGCAGCGCGCAAACCTG CCACTCTACCTGCCGGGTAATGGCGGGCTGCTGCTGGCGGCGGCCTACATGGCTCGCACCAACGCGTTTCCGAAGACCTG GGGAGTGCGCGCGGAAGGCTTTGCGGCGCTCCCGGTATACTGA
Upstream 100 bases:
>100_bases TCGGTGGCCGCCCCGCGGTGCCGCTCTCCGCGCTCGTAGTGGACTATCTCCGTCACGTCGATAACCACCTGGGACAGATT TTCCAGGCGGCATAGCGCTC
Downstream 100 bases:
>100_bases GCGTTGTGCGCTTGACTCCCCGCAATTTCGCGTGGCTGCTGCGCCGAAGTCTGCTCAACACGCTAGACGATGGCTGCTTC GGCTTTGCCAAGGGCGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 680; Mature: 679
Protein sequence:
>680_residues MAFSRRTFLGAVPAALAAQTAASKIDRRAVVERHNPALNGFNPRSPLSVGNGEFAFTADPTGLQTFPELYDNQMPLCTQA QWAWHTSPNTTDKRPEDLRLTEFETFGRKVGYPTSSSGQAELFNWLRENPHRLHLGRIGFAIAKPEDVRIVQQRLDLWSG VLHSEFEYAGNTISVETCCHPMLDVIAVRVQGRVPLAFEFPYASGAMNAADWSHQEKHSTKAKLTANRAEIDRRLDADTY TVTIGWPGAPAVMEQPGAHRLVLTPQSGSLQFYAAFQKAAHGSTTSDAVFAASRAHWQNFWMSGAAIDLSAAADPRAKEL ERRIVLSQYVTAIQCSGTLPPQETGLTCNSWYGKFHLEMHYWHAAHFATWDRPALLERSLDWYNRILPSARDKAKQQGYA GVRWPKMTAPDGRDSPSNIGPLLIWQQPHPIAMAELIYAANPTSETLGKYREIVFQSAEFMASYAHFDAKSGRYVLGPPV IPAQENHPARETWNPTFELEYWDYALGIAQQWRERLGLARNPRWDDIRAKLSPLPVKDGVYLAHENCPQTFTERNHDHPS MLGALGVLPGRKVDREAMRRTLKKVFAEWKWAATWGWDFPMVAMTAAALNEPALAIDALFVDSPKNTWLPNGHNWQRANL PLYLPGNGGLLLAAAYMARTNAFPKTWGVRAEGFAALPVY
Sequences:
>Translated_680_residues MAFSRRTFLGAVPAALAAQTAASKIDRRAVVERHNPALNGFNPRSPLSVGNGEFAFTADPTGLQTFPELYDNQMPLCTQA QWAWHTSPNTTDKRPEDLRLTEFETFGRKVGYPTSSSGQAELFNWLRENPHRLHLGRIGFAIAKPEDVRIVQQRLDLWSG VLHSEFEYAGNTISVETCCHPMLDVIAVRVQGRVPLAFEFPYASGAMNAADWSHQEKHSTKAKLTANRAEIDRRLDADTY TVTIGWPGAPAVMEQPGAHRLVLTPQSGSLQFYAAFQKAAHGSTTSDAVFAASRAHWQNFWMSGAAIDLSAAADPRAKEL ERRIVLSQYVTAIQCSGTLPPQETGLTCNSWYGKFHLEMHYWHAAHFATWDRPALLERSLDWYNRILPSARDKAKQQGYA GVRWPKMTAPDGRDSPSNIGPLLIWQQPHPIAMAELIYAANPTSETLGKYREIVFQSAEFMASYAHFDAKSGRYVLGPPV IPAQENHPARETWNPTFELEYWDYALGIAQQWRERLGLARNPRWDDIRAKLSPLPVKDGVYLAHENCPQTFTERNHDHPS MLGALGVLPGRKVDREAMRRTLKKVFAEWKWAATWGWDFPMVAMTAAALNEPALAIDALFVDSPKNTWLPNGHNWQRANL PLYLPGNGGLLLAAAYMARTNAFPKTWGVRAEGFAALPVY >Mature_679_residues AFSRRTFLGAVPAALAAQTAASKIDRRAVVERHNPALNGFNPRSPLSVGNGEFAFTADPTGLQTFPELYDNQMPLCTQAQ WAWHTSPNTTDKRPEDLRLTEFETFGRKVGYPTSSSGQAELFNWLRENPHRLHLGRIGFAIAKPEDVRIVQQRLDLWSGV LHSEFEYAGNTISVETCCHPMLDVIAVRVQGRVPLAFEFPYASGAMNAADWSHQEKHSTKAKLTANRAEIDRRLDADTYT VTIGWPGAPAVMEQPGAHRLVLTPQSGSLQFYAAFQKAAHGSTTSDAVFAASRAHWQNFWMSGAAIDLSAAADPRAKELE RRIVLSQYVTAIQCSGTLPPQETGLTCNSWYGKFHLEMHYWHAAHFATWDRPALLERSLDWYNRILPSARDKAKQQGYAG VRWPKMTAPDGRDSPSNIGPLLIWQQPHPIAMAELIYAANPTSETLGKYREIVFQSAEFMASYAHFDAKSGRYVLGPPVI PAQENHPARETWNPTFELEYWDYALGIAQQWRERLGLARNPRWDDIRAKLSPLPVKDGVYLAHENCPQTFTERNHDHPSM LGALGVLPGRKVDREAMRRTLKKVFAEWKWAATWGWDFPMVAMTAAALNEPALAIDALFVDSPKNTWLPNGHNWQRANLP LYLPGNGGLLLAAAYMARTNAFPKTWGVRAEGFAALPVY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76125; Mature: 75994
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFSRRTFLGAVPAALAAQTAASKIDRRAVVERHNPALNGFNPRSPLSVGNGEFAFTADP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCC TGLQTFPELYDNQMPLCTQAQWAWHTSPNTTDKRPEDLRLTEFETFGRKVGYPTSSSGQA CCHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCHH ELFNWLRENPHRLHLGRIGFAIAKPEDVRIVQQRLDLWSGVLHSEFEYAGNTISVETCCH HHHHHHHCCCCEEEEECEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHH PMLDVIAVRVQGRVPLAFEFPYASGAMNAADWSHQEKHSTKAKLTANRAEIDRRLDADTY HHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHCCHHHEECCHHHHHHHCCCCEE TVTIGWPGAPAVMEQPGAHRLVLTPQSGSLQFYAAFQKAAHGSTTSDAVFAASRAHWQNF EEEEECCCCCHHHCCCCCCEEEEECCCCCEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHH WMSGAAIDLSAAADPRAKELERRIVLSQYVTAIQCSGTLPPQETGLTCNSWYGKFHLEMH HCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCHHCCCEEECCCCEEEEEEE YWHAAHFATWDRPALLERSLDWYNRILPSARDKAKQQGYAGVRWPKMTAPDGRDSPSNIG EEEEEHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC PLLIWQQPHPIAMAELIYAANPTSETLGKYREIVFQSAEFMASYAHFDAKSGRYVLGPPV CEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCC IPAQENHPARETWNPTFELEYWDYALGIAQQWRERLGLARNPRWDDIRAKLSPLPVKDGV CCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCE YLAHENCPQTFTERNHDHPSMLGALGVLPGRKVDREAMRRTLKKVFAEWKWAATWGWDFP EEEECCCCHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCH MVAMTAAALNEPALAIDALFVDSPKNTWLPNGHNWQRANLPLYLPGNGGLLLAAAYMART HHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCEECCCCEEECCCCCEEHHHHHHHHC NAFPKTWGVRAEGFAALPVY CCCCCCCCCCCCCEEECCCC >Mature Secondary Structure AFSRRTFLGAVPAALAAQTAASKIDRRAVVERHNPALNGFNPRSPLSVGNGEFAFTADP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCC TGLQTFPELYDNQMPLCTQAQWAWHTSPNTTDKRPEDLRLTEFETFGRKVGYPTSSSGQA CCHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCHH ELFNWLRENPHRLHLGRIGFAIAKPEDVRIVQQRLDLWSGVLHSEFEYAGNTISVETCCH HHHHHHHCCCCEEEEECEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHH PMLDVIAVRVQGRVPLAFEFPYASGAMNAADWSHQEKHSTKAKLTANRAEIDRRLDADTY HHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHCCHHHEECCHHHHHHHCCCCEE TVTIGWPGAPAVMEQPGAHRLVLTPQSGSLQFYAAFQKAAHGSTTSDAVFAASRAHWQNF EEEEECCCCCHHHCCCCCCEEEEECCCCCEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHH WMSGAAIDLSAAADPRAKELERRIVLSQYVTAIQCSGTLPPQETGLTCNSWYGKFHLEMH HCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCHHCCCEEECCCCEEEEEEE YWHAAHFATWDRPALLERSLDWYNRILPSARDKAKQQGYAGVRWPKMTAPDGRDSPSNIG EEEEEHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC PLLIWQQPHPIAMAELIYAANPTSETLGKYREIVFQSAEFMASYAHFDAKSGRYVLGPPV CEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCC IPAQENHPARETWNPTFELEYWDYALGIAQQWRERLGLARNPRWDDIRAKLSPLPVKDGV CCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCE YLAHENCPQTFTERNHDHPSMLGALGVLPGRKVDREAMRRTLKKVFAEWKWAATWGWDFP EEEECCCCHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCH MVAMTAAALNEPALAIDALFVDSPKNTWLPNGHNWQRANLPLYLPGNGGLLLAAAYMART HHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCEECCCCEEECCCCCEEHHHHHHHHC NAFPKTWGVRAEGFAALPVY CCCCCCCCCCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA