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The map label for this gene is yfkH [H]

Identifier: 116619409

GI number: 116619409

Start: 355643

End: 356494

Strand: Direct

Name: yfkH [H]

Synonym: Acid_0268

Alternate gene names: 116619409

Gene position: 355643-356494 (Clockwise)

Preceding gene: 116619408

Following gene: 116619410

Centisome position: 3.57

GC content: 60.09

Gene sequence:

>852_bases
GTGCGCTTGACTCCCCGCAATTTCGCGTGGCTGCTGCGCCGAAGTCTGCTCAACACGCTAGACGATGGCTGCTTCGGCTT
TGCCAAGGGCGCCGCGTACTCGGCGCTGCTCAGCTTTTTTCCGGTACTGACCAGCGCGGCGACTATTTTGGTGCAGACCC
GCGCGGGTTTTGTCTCGGCCACACTGCAGAGCTTCCTTTCCCAGATCGTGCCTCCCGGCACCGAGGACCTGGTGGTGCAG
CAGTTCCGCGTGATGGGCGAACGTCCCTTCGGATTGCTCGTGGTGGCGGGACTGATTTCACTCTGGGCCGCTTCGGGGGT
GATCAAGAGCCTGATTGAAGGATTTCAGGCAGCTTACCGCGTGCCGCGCAATCGCAGTTTCCTGCACCAGAGCGGGGTCG
CGATGTCGCTGGTGCTGCTCTCGGCGGTCCCGTTGATCTGCGCGTCGCTGCTCCTGGTCTTCGGCAACCAGGTGGAGCGG
GCAGTGCTCAATTGGATGAAGGTGGATCCGTTCCTCAATCCGGTGGCCTGGGTCTGGCAGTTCGTAAGCCGGATGGCGCG
GTATCTGCTGGCCTTCGCAACCACGATCGCGGTCACCGCGTCCCTCTATTATTACGGCCCTTACCGCAAACAACGTTGGC
GATATGTTTGGCGCGGCGCGATTCTGGCGACGGTCCTCTGGTTTTTCGCCACGTTGGGGTTTGCGTGGTATGTCCGCAAC
ATTGCGCGTTATAACGTGATGTATGGCTCCATCGGCGCCGGGATCGCCCTTCTCGTCTGGATGTATCTTATCGCTCTGAT
TGCGTTAATGGGCTGCGAGTTCAATGCGGAACTTGAGCGTACTTCAAGCTGA

Upstream 100 bases:

>100_bases
TGCTGCTGGCGGCGGCCTACATGGCTCGCACCAACGCGTTTCCGAAGACCTGGGGAGTGCGCGCGGAAGGCTTTGCGGCG
CTCCCGGTATACTGAGCGTT

Downstream 100 bases:

>100_bases
CGCCATCCGCTACAATTTGTGATAGTGAAGAGCGCCGTCCTTGCAATCACCGTGGTGTCGTGTGTCCAAGCTGCGGGCAT
ACCGATGACCCTGGTGTCGG

Product: putative ribonuclease BN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MRLTPRNFAWLLRRSLLNTLDDGCFGFAKGAAYSALLSFFPVLTSAATILVQTRAGFVSATLQSFLSQIVPPGTEDLVVQ
QFRVMGERPFGLLVVAGLISLWAASGVIKSLIEGFQAAYRVPRNRSFLHQSGVAMSLVLLSAVPLICASLLLVFGNQVER
AVLNWMKVDPFLNPVAWVWQFVSRMARYLLAFATTIAVTASLYYYGPYRKQRWRYVWRGAILATVLWFFATLGFAWYVRN
IARYNVMYGSIGAGIALLVWMYLIALIALMGCEFNAELERTSS

Sequences:

>Translated_283_residues
MRLTPRNFAWLLRRSLLNTLDDGCFGFAKGAAYSALLSFFPVLTSAATILVQTRAGFVSATLQSFLSQIVPPGTEDLVVQ
QFRVMGERPFGLLVVAGLISLWAASGVIKSLIEGFQAAYRVPRNRSFLHQSGVAMSLVLLSAVPLICASLLLVFGNQVER
AVLNWMKVDPFLNPVAWVWQFVSRMARYLLAFATTIAVTASLYYYGPYRKQRWRYVWRGAILATVLWFFATLGFAWYVRN
IARYNVMYGSIGAGIALLVWMYLIALIALMGCEFNAELERTSS
>Mature_283_residues
MRLTPRNFAWLLRRSLLNTLDDGCFGFAKGAAYSALLSFFPVLTSAATILVQTRAGFVSATLQSFLSQIVPPGTEDLVVQ
QFRVMGERPFGLLVVAGLISLWAASGVIKSLIEGFQAAYRVPRNRSFLHQSGVAMSLVLLSAVPLICASLLLVFGNQVER
AVLNWMKVDPFLNPVAWVWQFVSRMARYLLAFATTIAVTASLYYYGPYRKQRWRYVWRGAILATVLWFFATLGFAWYVRN
IARYNVMYGSIGAGIALLVWMYLIALIALMGCEFNAELERTSS

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 31642; Mature: 31642

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCC
>Mature Secondary Structure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HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]