| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116619368
Identifier: 116619368
GI number: 116619368
Start: 304752
End: 306737
Strand: Direct
Name: 116619368
Synonym: Acid_0226
Alternate gene names: NA
Gene position: 304752-306737 (Clockwise)
Preceding gene: 116619364
Following gene: 116619370
Centisome position: 3.06
GC content: 68.13
Gene sequence:
>1986_bases ATGGAATTTTCGAAGAGGTACAAATTAATCGAACAGCTGCCCGGGGAGGGCGTTCAGAGCTACCGCGCGCTGCAGATGGA TGCGGGCCGGGACGTCGCGGTGCACCTTCTGGTCGGCGGGAAGACACCGGAAAATGAGGCGCTTCTGGTGCGCCTTCGTG CGATGCAGCCGCATTCGCTGGCGAAGTTGCTCGAGGTGGGGGAACACCAGGACTCCACCTTCGTGGTGACGGTGGCGCCG CCGTTTCAGCGGTTGGAAGAGTGGCTGGCGGAACAGGAACGTGAGGCTGCCGCCACGAAGGAGTTCGGCAAGGCAGGCTT CTGGAAACGGCCGGATATTGGATCGATGACGGCGCCTGCCAAGGTGCCGCAGCCGCCGCCGGCTGCGCCGGTGCGGGAGC CCGGTGAGTTCACGAAGCAATTCCAAATGCCCGCCAGTCGGCCAGCCGAAGCTGGCGATTTCACGCGGATGTTCGAGACT CCGGCCGCGCCGCCGTCGGCGACAACAGTACCGACCCAGCCACCCGCGCGTCCCGCGGAAACTCCGTCTGCCGAGCTTGG CGATTTCACGCGGATGTTCCAGACTCCGGCCGCGCCGCCGTCGGCGACAACAGTACCGCCCCAGCCACCCGCGCGTGTAG CGGAAGCTCCGGCCATCGAGCCTGGCGATTTCACACGGATGTTCCAGACTCCGGCCGCGCCGCCGTCGGGGACAACAGTA CCGCCCCAGCCACCCGCGCGTCCCGCGGAAACTCCGTCCACCGAGCCTGGCGATTTCACGCGGATGTTCCAGACTCCGGC CGCGCCGCCGTCGGCGACAACAGTACCGCCCCAGCCACCCGCGCGTCCCGCGGAAACTCCGTACACCGAGCCTGGCGATT TCACACGGATGTTCCAGATTCCGGCCGCGCCGCCGTCGGAGACAACGGTACCGCCGCAGCCACCCGCGCGTGTAGCGGAA GCTCCGGCCGCCGAGCCCGGGGATTTCACGCGGATGTTCCAGACTTCGGCCGCGCCGGCGGCGGAGACAACAGTGCCGCC GCAGCCACCCGCGCGTGCAGCAGAAACACCGGCCGCCGAGCCCGGGGATTTCACGCGGATGTTCCAGGCTCCTGCCACAC CGCCCGCGCAGCCTGCGCGTCCCGCGGGAAATCTGGCATCGCAACCCGGCGAGTTCACGCAGCTATTTCAATCGCCGCCG CAGCCTCCAAATGCACCACCACCACCGGCGGCAGGCCCCGGCGATTTCACCCGGCTGTTCCATTCGCCCATGCCCGATGT CCCGGCGCAGGGGGATTGGCCTCCGGCGCCGCCGAAAGCGCAGGAGCCGGGTGACTTCACGCGGATGTTTCAAGCCCCTC GCGCTGGCTCTCCGGAAGCTGCCGCGCCAACCGGAGGCCAGTTCACGCAGTTCTTCAAACCGGGCGGATTGCCGGCGGGG CCGCAGTTCCCCTCGGCGTCCCAATTTCCGCCGGCCGCTCCGGCCCCTGCCTCCCCTCCACCCCAGCAGGAATTGGGGGA GTACACTCGCATGTTCGGTCCTGGCACCCTGTCCGGCTCCCCGGCACCGGCCGCCGGCGCGCCGCCGGCCGCGCCACCGC CCTCCTACGTCCCGGGTGGAAGCGCTACCCAGGCCTTCCGGTCTGTACCCGGTTCCGTGCCCGCTGCCCCGCCCCAGGGT CCGAGCGAGTACACGAGGATGATGTCGGTTCCCTCGATTCCCGGGGCGCCCCCACCGGCCGCGCCCCCAGCGCCTTCCAT GCAAATGCCCGGAATGCAAATGCCCGGGACACCACAGATGGGGATGCCGCAAGTGCCTTACGTACAACCGCCGGTCATGC CGCCAGTTTCGCCGCCTCAGGTTGCGGCGGCGCCGGTAAAGGCTCCAGCAAGCAATCCCGCGAATCTTCTGCTGATCGTG ATCTTTTGCCTGCTAGCGTTTCTGGCGGGTGGGATTGTGGTTTACCTGCTGGCACGGCATCGGTAG
Upstream 100 bases:
>100_bases CATAGACGCGAGTGAAACCCTTCTTGCGCCACTTGCGGCGCGAGTGTGCTGGACTCCGCAGGGGCGAAGGTAGCATGATG GACAACAGGCTCAAGGGCAC
Downstream 100 bases:
>100_bases TTCAGCTGCTTTGCGGCAGAACGATAATCAGCTCGGCCTGTGGGTTGGGCAGATCCCCCGGGATGTACGCCGCGAAATTG CGCGAACGCTGGATCGATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 661; Mature: 661
Protein sequence:
>661_residues MEFSKRYKLIEQLPGEGVQSYRALQMDAGRDVAVHLLVGGKTPENEALLVRLRAMQPHSLAKLLEVGEHQDSTFVVTVAP PFQRLEEWLAEQEREAAATKEFGKAGFWKRPDIGSMTAPAKVPQPPPAAPVREPGEFTKQFQMPASRPAEAGDFTRMFET PAAPPSATTVPTQPPARPAETPSAELGDFTRMFQTPAAPPSATTVPPQPPARVAEAPAIEPGDFTRMFQTPAAPPSGTTV PPQPPARPAETPSTEPGDFTRMFQTPAAPPSATTVPPQPPARPAETPYTEPGDFTRMFQIPAAPPSETTVPPQPPARVAE APAAEPGDFTRMFQTSAAPAAETTVPPQPPARAAETPAAEPGDFTRMFQAPATPPAQPARPAGNLASQPGEFTQLFQSPP QPPNAPPPPAAGPGDFTRLFHSPMPDVPAQGDWPPAPPKAQEPGDFTRMFQAPRAGSPEAAAPTGGQFTQFFKPGGLPAG PQFPSASQFPPAAPAPASPPPQQELGEYTRMFGPGTLSGSPAPAAGAPPAAPPPSYVPGGSATQAFRSVPGSVPAAPPQG PSEYTRMMSVPSIPGAPPPAAPPAPSMQMPGMQMPGTPQMGMPQVPYVQPPVMPPVSPPQVAAAPVKAPASNPANLLLIV IFCLLAFLAGGIVVYLLARHR
Sequences:
>Translated_661_residues MEFSKRYKLIEQLPGEGVQSYRALQMDAGRDVAVHLLVGGKTPENEALLVRLRAMQPHSLAKLLEVGEHQDSTFVVTVAP PFQRLEEWLAEQEREAAATKEFGKAGFWKRPDIGSMTAPAKVPQPPPAAPVREPGEFTKQFQMPASRPAEAGDFTRMFET PAAPPSATTVPTQPPARPAETPSAELGDFTRMFQTPAAPPSATTVPPQPPARVAEAPAIEPGDFTRMFQTPAAPPSGTTV PPQPPARPAETPSTEPGDFTRMFQTPAAPPSATTVPPQPPARPAETPYTEPGDFTRMFQIPAAPPSETTVPPQPPARVAE APAAEPGDFTRMFQTSAAPAAETTVPPQPPARAAETPAAEPGDFTRMFQAPATPPAQPARPAGNLASQPGEFTQLFQSPP QPPNAPPPPAAGPGDFTRLFHSPMPDVPAQGDWPPAPPKAQEPGDFTRMFQAPRAGSPEAAAPTGGQFTQFFKPGGLPAG PQFPSASQFPPAAPAPASPPPQQELGEYTRMFGPGTLSGSPAPAAGAPPAAPPPSYVPGGSATQAFRSVPGSVPAAPPQG PSEYTRMMSVPSIPGAPPPAAPPAPSMQMPGMQMPGTPQMGMPQVPYVQPPVMPPVSPPQVAAAPVKAPASNPANLLLIV IFCLLAFLAGGIVVYLLARHR >Mature_661_residues MEFSKRYKLIEQLPGEGVQSYRALQMDAGRDVAVHLLVGGKTPENEALLVRLRAMQPHSLAKLLEVGEHQDSTFVVTVAP PFQRLEEWLAEQEREAAATKEFGKAGFWKRPDIGSMTAPAKVPQPPPAAPVREPGEFTKQFQMPASRPAEAGDFTRMFET PAAPPSATTVPTQPPARPAETPSAELGDFTRMFQTPAAPPSATTVPPQPPARVAEAPAIEPGDFTRMFQTPAAPPSGTTV PPQPPARPAETPSTEPGDFTRMFQTPAAPPSATTVPPQPPARPAETPYTEPGDFTRMFQIPAAPPSETTVPPQPPARVAE APAAEPGDFTRMFQTSAAPAAETTVPPQPPARAAETPAAEPGDFTRMFQAPATPPAQPARPAGNLASQPGEFTQLFQSPP QPPNAPPPPAAGPGDFTRLFHSPMPDVPAQGDWPPAPPKAQEPGDFTRMFQAPRAGSPEAAAPTGGQFTQFFKPGGLPAG PQFPSASQFPPAAPAPASPPPQQELGEYTRMFGPGTLSGSPAPAAGAPPAAPPPSYVPGGSATQAFRSVPGSVPAAPPQG PSEYTRMMSVPSIPGAPPPAAPPAPSMQMPGMQMPGTPQMGMPQVPYVQPPVMPPVSPPQVAAAPVKAPASNPANLLLIV IFCLLAFLAGGIVVYLLARHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI72000923, Length=277, Percent_Identity=25.6317689530686, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI72000919, Length=277, Percent_Identity=25.6317689530686, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI72000921, Length=277, Percent_Identity=25.6317689530686, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69020; Mature: 69020
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFSKRYKLIEQLPGEGVQSYRALQMDAGRDVAVHLLVGGKTPENEALLVRLRAMQPHSL CCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEEECCCCHHH AKLLEVGEHQDSTFVVTVAPPFQRLEEWLAEQEREAAATKEFGKAGFWKRPDIGSMTAPA HHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC KVPQPPPAAPVREPGEFTKQFQMPASRPAEAGDFTRMFETPAAPPSATTVPTQPPARPAE CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC TPSAELGDFTRMFQTPAAPPSATTVPPQPPARVAEAPAIEPGDFTRMFQTPAAPPSGTTV CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHCCCCCCCCCCC PPQPPARPAETPSTEPGDFTRMFQTPAAPPSATTVPPQPPARPAETPYTEPGDFTRMFQI CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC PAAPPSETTVPPQPPARVAEAPAAEPGDFTRMFQTSAAPAAETTVPPQPPARAAETPAAE CCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC PGDFTRMFQAPATPPAQPARPAGNLASQPGEFTQLFQSPPQPPNAPPPPAAGPGDFTRLF CCHHHHHHHCCCCCCCCCCCCCCCHHCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH HSPMPDVPAQGDWPPAPPKAQEPGDFTRMFQAPRAGSPEAAAPTGGQFTQFFKPGGLPAG HCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCC PQFPSASQFPPAAPAPASPPPQQELGEYTRMFGPGTLSGSPAPAAGAPPAAPPPSYVPGG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SATQAFRSVPGSVPAAPPQGPSEYTRMMSVPSIPGAPPPAAPPAPSMQMPGMQMPGTPQM HHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GMPQVPYVQPPVMPPVSPPQVAAAPVKAPASNPANLLLIVIFCLLAFLAGGIVVYLLARH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC R C >Mature Secondary Structure MEFSKRYKLIEQLPGEGVQSYRALQMDAGRDVAVHLLVGGKTPENEALLVRLRAMQPHSL CCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEEECCCCHHH AKLLEVGEHQDSTFVVTVAPPFQRLEEWLAEQEREAAATKEFGKAGFWKRPDIGSMTAPA HHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC KVPQPPPAAPVREPGEFTKQFQMPASRPAEAGDFTRMFETPAAPPSATTVPTQPPARPAE CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC TPSAELGDFTRMFQTPAAPPSATTVPPQPPARVAEAPAIEPGDFTRMFQTPAAPPSGTTV CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHCCCCCCCCCCC PPQPPARPAETPSTEPGDFTRMFQTPAAPPSATTVPPQPPARPAETPYTEPGDFTRMFQI CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC PAAPPSETTVPPQPPARVAEAPAAEPGDFTRMFQTSAAPAAETTVPPQPPARAAETPAAE CCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC PGDFTRMFQAPATPPAQPARPAGNLASQPGEFTQLFQSPPQPPNAPPPPAAGPGDFTRLF CCHHHHHHHCCCCCCCCCCCCCCCHHCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH HSPMPDVPAQGDWPPAPPKAQEPGDFTRMFQAPRAGSPEAAAPTGGQFTQFFKPGGLPAG HCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCC PQFPSASQFPPAAPAPASPPPQQELGEYTRMFGPGTLSGSPAPAAGAPPAAPPPSYVPGG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SATQAFRSVPGSVPAAPPQGPSEYTRMMSVPSIPGAPPPAAPPAPSMQMPGMQMPGTPQM HHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GMPQVPYVQPPVMPPVSPPQVAAAPVKAPASNPANLLLIVIFCLLAFLAGGIVVYLLARH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA