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The map label for this gene is yvqK [H]

Identifier: 116619267

GI number: 116619267

Start: 166065

End: 166760

Strand: Direct

Name: yvqK [H]

Synonym: Acid_0123

Alternate gene names: 116619267

Gene position: 166065-166760 (Clockwise)

Preceding gene: 116619266

Following gene: 116619268

Centisome position: 1.67

GC content: 64.8

Gene sequence:

>696_bases
TTGTTTTTCTCCGCGGTTCTCTGCGTCTCTGCGGCTCTGCGAGAAAAGGAATCCTTCATGACCCACGACCCCTTCAACAC
TCCCCGCCTCGCCATCAATCGCGTCTACACCCGTAAGGGCGACACCGGCGAGACCGGTCTCGTCGGCGGTCAGCGCGTTC
CGAAAGACGGCCCCCGCATCGACGCCTATGGCACCGTTGACGAGCTCAACAGCTTCCTCGGCATTGCCCGAGCCACCGCC
AATCAGCTCGCTGTCCAGGAACCCCGCCTGGCCCTGCTCGCCGCGATTCTCCTCCGCGTCCAGCACGAGCTCTTCAATCT
CGGGTCTATCCTCGCCACCCTCCCCGAGGACGTTCACCCTCGCCAGCCCCGCGTCACCGCCGCCGAGATCGCCCAGCTCG
AATCCGAGATGGACGCCATGAACGAAGACCTGCCGCCCCTCCGCTCTTTCGTCCTCCCCGGCGGCAGCCGCCTCGATGCC
GAGCTTCACGTCGGCCGCACCGTTTGCCGTCGTGCCGAACGCATCGTCGTCGCGCTCGCCCGCTCGGAAACCGTGCCGCC
CGACGCCATCCGCTACCTCAACCGCTTGAGCGATTCGCTTTTCGTCTGGAGCCGCTGGGCCAATCACATCACCGGCACTC
CGGAAACTTTGTGGGAACCAAACCAATCCGCCTCCGGGCGGGTGGATAATGGATAA

Upstream 100 bases:

>100_bases
TTGCCATCGATCGCGTCTACGGCACCAAAAGACTGTTCTCGCAAAGCCGCAAAGCCGCAAAGAACCGCCAAGAACAAGAA
CTGCCTACTCTTTCTTTGCT

Downstream 100 bases:

>100_bases
TTAGGAATTAAGGAGAATTCGATGGAAAACAATACGGCGAGGCCCCTGGGCGCGGGCCTGACGGTCCTGGGTGCAGTGGC
GCGGATTTTGCCGCATCTCC

Product: ATP:cob(I)alamin adenosyltransferase

Products: NA

Alternate protein names: Cob(I)alamin adenosyltransferase [H]

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MFFSAVLCVSAALREKESFMTHDPFNTPRLAINRVYTRKGDTGETGLVGGQRVPKDGPRIDAYGTVDELNSFLGIARATA
NQLAVQEPRLALLAAILLRVQHELFNLGSILATLPEDVHPRQPRVTAAEIAQLESEMDAMNEDLPPLRSFVLPGGSRLDA
ELHVGRTVCRRAERIVVALARSETVPPDAIRYLNRLSDSLFVWSRWANHITGTPETLWEPNQSASGRVDNG

Sequences:

>Translated_231_residues
MFFSAVLCVSAALREKESFMTHDPFNTPRLAINRVYTRKGDTGETGLVGGQRVPKDGPRIDAYGTVDELNSFLGIARATA
NQLAVQEPRLALLAAILLRVQHELFNLGSILATLPEDVHPRQPRVTAAEIAQLESEMDAMNEDLPPLRSFVLPGGSRLDA
ELHVGRTVCRRAERIVVALARSETVPPDAIRYLNRLSDSLFVWSRWANHITGTPETLWEPNQSASGRVDNG
>Mature_231_residues
MFFSAVLCVSAALREKESFMTHDPFNTPRLAINRVYTRKGDTGETGLVGGQRVPKDGPRIDAYGTVDELNSFLGIARATA
NQLAVQEPRLALLAAILLRVQHELFNLGSILATLPEDVHPRQPRVTAAEIAQLESEMDAMNEDLPPLRSFVLPGGSRLDA
ELHVGRTVCRRAERIVVALARSETVPPDAIRYLNRLSDSLFVWSRWANHITGTPETLWEPNQSASGRVDNG

Specific function: Unknown

COG id: COG2096

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cob(I)alamin adenosyltransferase family [H]

Homologues:

Organism=Homo sapiens, GI16418349, Length=199, Percent_Identity=36.6834170854271, Blast_Score=121, Evalue=6e-28,
Organism=Caenorhabditis elegans, GI115534154, Length=171, Percent_Identity=39.766081871345, Blast_Score=121, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017858
- InterPro:   IPR002779
- InterPro:   IPR016030
- ProDom:   PD007457 [H]

Pfam domain/function: PF01923 Cob_adeno_trans [H]

EC number: =2.5.1.17 [H]

Molecular weight: Translated: 25477; Mature: 25477

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFSAVLCVSAALREKESFMTHDPFNTPRLAINRVYTRKGDTGETGLVGGQRVPKDGPRI
CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
DAYGTVDELNSFLGIARATANQLAVQEPRLALLAAILLRVQHELFNLGSILATLPEDVHP
CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RQPRVTAAEIAQLESEMDAMNEDLPPLRSFVLPGGSRLDAELHVGRTVCRRAERIVVALA
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RSETVPPDAIRYLNRLSDSLFVWSRWANHITGTPETLWEPNQSASGRVDNG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MFFSAVLCVSAALREKESFMTHDPFNTPRLAINRVYTRKGDTGETGLVGGQRVPKDGPRI
CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
DAYGTVDELNSFLGIARATANQLAVQEPRLALLAAILLRVQHELFNLGSILATLPEDVHP
CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RQPRVTAAEIAQLESEMDAMNEDLPPLRSFVLPGGSRLDAELHVGRTVCRRAERIVVALA
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RSETVPPDAIRYLNRLSDSLFVWSRWANHITGTPETLWEPNQSASGRVDNG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]