| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116619251
Identifier: 116619251
GI number: 116619251
Start: 147482
End: 147826
Strand: Direct
Name: 116619251
Synonym: Acid_0107
Alternate gene names: NA
Gene position: 147482-147826 (Clockwise)
Preceding gene: 116619250
Following gene: 116619253
Centisome position: 1.48
GC content: 56.81
Gene sequence:
>345_bases GTGAGCGTAAAGTTGACTACTCGGCAGGTAGGTGACGTGACGGTGGTGGATGTGGCAGGGCGAATCACGTTGGGCGAAGG CTCCAGCGCCTTGCGTGATGCTGTCCGCGACATGGTGAGCAAGAACCAGAAGAAGATCCTGCTCAACCTCGGCGATGTGT CTTACATCGATAGCTCGGGCATCGGGGAACTGGTGTCCGGTTTCACCACGGTGACCAACGGCGGCGGGAATTTGAAGCTG CTTAACCTCAACAAGCGGGTCAAAGACCTGCTGCAGATCACGAAGCTATACACCGTTTTCGAAGTCCACGAAGACGAAGC GGCCGCCATCCGCAGCTTCGCATAA
Upstream 100 bases:
>100_bases TTCCAGATGCGACACTTGGAATCGGGCGGGACCGAGGTAACTTTGGTCAAGAACTTGGTGTCTAAATAGATTCTGCGGTT TCAGCCAGGAGGCATATTCA
Downstream 100 bases:
>100_bases TCCCTGGCTGGCGTGGGGTCGGACAGGCCTACCGGCCTGTCCCCCCGTTTATCCTCCACCCACGAATTGAACGATTTCCA GCTGCGCCCCGGGGCGCAAA
Product: anti-sigma-factor antagonist
Products: NA
Alternate protein names: Anti-Anti-Sigma Factor Family Protein
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MSVKLTTRQVGDVTVVDVAGRITLGEGSSALRDAVRDMVSKNQKKILLNLGDVSYIDSSGIGELVSGFTTVTNGGGNLKL LNLNKRVKDLLQITKLYTVFEVHEDEAAAIRSFA
Sequences:
>Translated_114_residues MSVKLTTRQVGDVTVVDVAGRITLGEGSSALRDAVRDMVSKNQKKILLNLGDVSYIDSSGIGELVSGFTTVTNGGGNLKL LNLNKRVKDLLQITKLYTVFEVHEDEAAAIRSFA >Mature_113_residues SVKLTTRQVGDVTVVDVAGRITLGEGSSALRDAVRDMVSKNQKKILLNLGDVSYIDSSGIGELVSGFTTVTNGGGNLKLL NLNKRVKDLLQITKLYTVFEVHEDEAAAIRSFA
Specific function: Unknown
COG id: COG1366
COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12253; Mature: 12122
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVKLTTRQVGDVTVVDVAGRITLGEGSSALRDAVRDMVSKNQKKILLNLGDVSYIDSSG CCEEECCCCCCCEEEEEECCEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCEEEECCCC IGELVSGFTTVTNGGGNLKLLNLNKRVKDLLQITKLYTVFEVHEDEAAAIRSFA HHHHHHCHHEEECCCCCEEEEECCHHHHHHHHHHHHHHHEEECCCHHHHHHCCC >Mature Secondary Structure SVKLTTRQVGDVTVVDVAGRITLGEGSSALRDAVRDMVSKNQKKILLNLGDVSYIDSSG CEEECCCCCCCEEEEEECCEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCEEEECCCC IGELVSGFTTVTNGGGNLKLLNLNKRVKDLLQITKLYTVFEVHEDEAAAIRSFA HHHHHHCHHEEECCCCCEEEEECCHHHHHHHHHHHHHHHEEECCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA