Click here to switch to the map view.

The map label for this gene is 116517106

Identifier: 116517106

GI number: 116517106

Start: 1398340

End: 1399935

Strand: Reverse

Name: 116517106

Synonym: SPD_1380

Alternate gene names: NA

Gene position: 1399935-1398340 (Counterclockwise)

Preceding gene: 116515494

Following gene: 116515817

Centisome position: 68.42

GC content: 42.61

Gene sequence:

>1596_bases
ATGAAACGAATAGTCTTTGAACTTATTTTTATCGCAACGACCTGGTATATCTTTTTACCGCCCCTTAACCTGACCAGCTG
GGAATTTCTCTTCTTCCTCTGTGGGCATTTGTTAGTTGTGGCAATATTATTTGGCTTTGGCAAGGGGATAAACCTTGTCA
AAACGGTTCATGTGCGCCACGGTAAGGCGGAAGCTGCCTTAAATCTTGAGGGTTTCAAAATCAATCGGTTAGGGAAAATT
CTGTTAGCTTCGATTGGAGGAATTCTTCTCTTGGCAGCTTTGGTTTCCTTGGTAACTTCCAGCATGTTTCAGGCTAAAAA
TTATGCCAATGTAGTCACGGTTACGGAAAAAGACTTTACTGAATTTCCTAAGAGTGACACCAGTAAGGTTCCTATCCTAG
ATAGAAGTACTGCTGAAAAAATTGGAGACCGCTACTTGGGTTCCCTAACCGATAAGGTGTCGCAATACGTAGCGGCAGAT
ACCTATACCCAATTGACAATTGATGGGAAACCTTATCGGGTCACACCACTAGAATATGCAGACCCTATCAAATGGTTTAA
CAATCAAGCCAAGGGAATCGGTGAGTATATCAAGGTGGACATGGTAACTGGAAATGCGGATTTGGTGGACTTGAAGACAC
CAATCAAGTATTCAGACTCGGAGTATTTTAACCGTGATGTCAAACGTCACCTGCGCTTGAAGTACCCGACCAAAATCTTT
AAAACTCCATCTTTTGAGGTGGACGATGAGGGCAATCCTTTCTATGTAGCAACGGTTTACCAAAAGCAATTTGGACTTGC
TGTTCCTCGTCCTGCTTCAGTCATTATCTTGGATGCTACAAATGGAGAAACCAAGGAATACAGCTTATCAGATGTTCCAG
AATGGGTGGACAGGATCTATCCAGCAGAGGAAACCATTGAGCAAATCAACTACAACGGCAAGTACAAGGACGGTTTCTTG
AATGCCATGATTTCCAAGAAAAACGTGACCCAGACTACCAAGGGCTATAATTACTTGTCTATCGGTAATGACATCTATCT
CTACACAGGTGTGACGTCGGCTAATGCGGATGAGAGTAATCTTGGTTTCATCCTTGAAAATATGCGAACAGGAGAAATTA
CTAAGTATAGCTTGGCTTCTGCGACAGAAGAATCAGCCCGTGAATCAGCAGAAGGTGCTGTTCAGGAGAAATCCTACAAA
GCAACCTTCCCAATCCTCATCAACCTCAATGACAAGCCTCTCTACATCATGGGCTTAAAGGACAATGCTGGCTTGGTCAA
AGAGTACGCCCTGGTAGACGCAGTCGAGTACCAAAATGTTATCGTTGCTACTACAGTGGAAGAGATGCTCAGCAAGTATG
CCAATAAAAACGACCTTGAAATTGACAATGCAACGACAGAAAGCATCAAGGGAGTAGTAGCAGACCTCAAATCAGCTGTT
ATCAAGGGAGACACTGTCTACTTCTTTAAAGTTGATGGCAAGATATACAAGGTAAAGGCTTCAGTATCCGATGACCTTCC
TTACCTTGAAAATGGTAAAACCTTCGAAGGTCAAGTAGGAAAAGACAATTATCTCAAGACCTTTAAAGTACAATAA

Upstream 100 bases:

>100_bases
AGTGGCAGGAACAGACCATTACCTTGACAGGCTTCCCAGCTCAGATTTGCCAGCATGAGCTGGATCACTTGGAAGGACGA
ATCATTTAGGAGGAAAGCAA

Downstream 100 bases:

>100_bases
TACTCTTCGAAAATCTCTAGCTCTATCTGCAACCTCAAAACAGTGTTTTGAGCAGCCTGCGGCTAGTTTCCTAGTTTGCT
CTTTGATTTTCATTGAGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 531; Mature: 531

Protein sequence:

>531_residues
MKRIVFELIFIATTWYIFLPPLNLTSWEFLFFLCGHLLVVAILFGFGKGINLVKTVHVRHGKAEAALNLEGFKINRLGKI
LLASIGGILLLAALVSLVTSSMFQAKNYANVVTVTEKDFTEFPKSDTSKVPILDRSTAEKIGDRYLGSLTDKVSQYVAAD
TYTQLTIDGKPYRVTPLEYADPIKWFNNQAKGIGEYIKVDMVTGNADLVDLKTPIKYSDSEYFNRDVKRHLRLKYPTKIF
KTPSFEVDDEGNPFYVATVYQKQFGLAVPRPASVIILDATNGETKEYSLSDVPEWVDRIYPAEETIEQINYNGKYKDGFL
NAMISKKNVTQTTKGYNYLSIGNDIYLYTGVTSANADESNLGFILENMRTGEITKYSLASATEESARESAEGAVQEKSYK
ATFPILINLNDKPLYIMGLKDNAGLVKEYALVDAVEYQNVIVATTVEEMLSKYANKNDLEIDNATTESIKGVVADLKSAV
IKGDTVYFFKVDGKIYKVKASVSDDLPYLENGKTFEGQVGKDNYLKTFKVQ

Sequences:

>Translated_531_residues
MKRIVFELIFIATTWYIFLPPLNLTSWEFLFFLCGHLLVVAILFGFGKGINLVKTVHVRHGKAEAALNLEGFKINRLGKI
LLASIGGILLLAALVSLVTSSMFQAKNYANVVTVTEKDFTEFPKSDTSKVPILDRSTAEKIGDRYLGSLTDKVSQYVAAD
TYTQLTIDGKPYRVTPLEYADPIKWFNNQAKGIGEYIKVDMVTGNADLVDLKTPIKYSDSEYFNRDVKRHLRLKYPTKIF
KTPSFEVDDEGNPFYVATVYQKQFGLAVPRPASVIILDATNGETKEYSLSDVPEWVDRIYPAEETIEQINYNGKYKDGFL
NAMISKKNVTQTTKGYNYLSIGNDIYLYTGVTSANADESNLGFILENMRTGEITKYSLASATEESARESAEGAVQEKSYK
ATFPILINLNDKPLYIMGLKDNAGLVKEYALVDAVEYQNVIVATTVEEMLSKYANKNDLEIDNATTESIKGVVADLKSAV
IKGDTVYFFKVDGKIYKVKASVSDDLPYLENGKTFEGQVGKDNYLKTFKVQ
>Mature_531_residues
MKRIVFELIFIATTWYIFLPPLNLTSWEFLFFLCGHLLVVAILFGFGKGINLVKTVHVRHGKAEAALNLEGFKINRLGKI
LLASIGGILLLAALVSLVTSSMFQAKNYANVVTVTEKDFTEFPKSDTSKVPILDRSTAEKIGDRYLGSLTDKVSQYVAAD
TYTQLTIDGKPYRVTPLEYADPIKWFNNQAKGIGEYIKVDMVTGNADLVDLKTPIKYSDSEYFNRDVKRHLRLKYPTKIF
KTPSFEVDDEGNPFYVATVYQKQFGLAVPRPASVIILDATNGETKEYSLSDVPEWVDRIYPAEETIEQINYNGKYKDGFL
NAMISKKNVTQTTKGYNYLSIGNDIYLYTGVTSANADESNLGFILENMRTGEITKYSLASATEESARESAEGAVQEKSYK
ATFPILINLNDKPLYIMGLKDNAGLVKEYALVDAVEYQNVIVATTVEEMLSKYANKNDLEIDNATTESIKGVVADLKSAV
IKGDTVYFFKVDGKIYKVKASVSDDLPYLENGKTFEGQVGKDNYLKTFKVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59396; Mature: 59396

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIVFELIFIATTWYIFLPPLNLTSWEFLFFLCGHLLVVAILFGFGKGINLVKTVHVRH
CHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEC
GKAEAALNLEGFKINRLGKILLASIGGILLLAALVSLVTSSMFQAKNYANVVTVTEKDFT
CCCCEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHH
EFPKSDTSKVPILDRSTAEKIGDRYLGSLTDKVSQYVAADTYTQLTIDGKPYRVTPLEYA
HCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCC
DPIKWFNNQAKGIGEYIKVDMVTGNADLVDLKTPIKYSDSEYFNRDVKRHLRLKYPTKIF
CHHHHHCCCCCCCCCEEEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHEEECCCHHHH
KTPSFEVDDEGNPFYVATVYQKQFGLAVPRPASVIILDATNGETKEYSLSDVPEWVDRIY
CCCCCCCCCCCCCEEEEEEEEHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHC
PAEETIEQINYNGKYKDGFLNAMISKKNVTQTTKGYNYLSIGNDIYLYTGVTSANADESN
CHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCEEEEEEECCCCCCCCCC
LGFILENMRTGEITKYSLASATEESARESAEGAVQEKSYKATFPILINLNDKPLYIMGLK
CCEEEECCCCCCEEEEEHHHHHHHHHHHHHHCCHHHCCCCEEEEEEEEECCCCEEEEEEC
DNAGLVKEYALVDAVEYQNVIVATTVEEMLSKYANKNDLEIDNATTESIKGVVADLKSAV
CCCCHHHHHHHHHHHHHCCEEEEHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHH
IKGDTVYFFKVDGKIYKVKASVSDDLPYLENGKTFEGQVGKDNYLKTFKVQ
CCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCEEECCCCCCCCEEEEEEC
>Mature Secondary Structure
MKRIVFELIFIATTWYIFLPPLNLTSWEFLFFLCGHLLVVAILFGFGKGINLVKTVHVRH
CHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEC
GKAEAALNLEGFKINRLGKILLASIGGILLLAALVSLVTSSMFQAKNYANVVTVTEKDFT
CCCCEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHH
EFPKSDTSKVPILDRSTAEKIGDRYLGSLTDKVSQYVAADTYTQLTIDGKPYRVTPLEYA
HCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCC
DPIKWFNNQAKGIGEYIKVDMVTGNADLVDLKTPIKYSDSEYFNRDVKRHLRLKYPTKIF
CHHHHHCCCCCCCCCEEEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHEEECCCHHHH
KTPSFEVDDEGNPFYVATVYQKQFGLAVPRPASVIILDATNGETKEYSLSDVPEWVDRIY
CCCCCCCCCCCCCEEEEEEEEHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHC
PAEETIEQINYNGKYKDGFLNAMISKKNVTQTTKGYNYLSIGNDIYLYTGVTSANADESN
CHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCEEEEEEECCCCCCCCCC
LGFILENMRTGEITKYSLASATEESARESAEGAVQEKSYKATFPILINLNDKPLYIMGLK
CCEEEECCCCCCEEEEEHHHHHHHHHHHHHHCCHHHCCCCEEEEEEEEECCCCEEEEEEC
DNAGLVKEYALVDAVEYQNVIVATTVEEMLSKYANKNDLEIDNATTESIKGVVADLKSAV
CCCCHHHHHHHHHHHHHCCEEEEHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHH
IKGDTVYFFKVDGKIYKVKASVSDDLPYLENGKTFEGQVGKDNYLKTFKVQ
CCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCEEECCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA