| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
Click here to switch to the map view.
The map label for this gene is 116517001
Identifier: 116517001
GI number: 116517001
Start: 30700
End: 31053
Strand: Reverse
Name: 116517001
Synonym: SPD_0037
Alternate gene names: NA
Gene position: 31053-30700 (Counterclockwise)
Preceding gene: 116516491
Following gene: 116516187
Centisome position: 1.52
GC content: 39.83
Gene sequence:
>354_bases ATGATTCTCAGACATCTGGGAATTAGCCCGACCAATGACTTGGTTGCTAAGAAAATATTCAGCAATCCAGAAATCACTTG TCAATTTATTCGCGATATGCTGGACTTGCCAGCAAAAAATGTGACCATTTTGGAGGGAAGCGATATTCACGTATTACTCT CCATGCCTTACTCGGTGCAGGATTTTTATACCAGTATAGACGTCTTGGCGGAGTTGGATAACGGTACTCAAGTAATTATT GAGATTCAAGTCCATCATCAGAATTTTTTCATCAATCACTTGTGGGCTTACCTGTGCAGTCAGGTTAATCAAAATCTTGA AAAAATTCATCAGCGAGAAGGTGATACTCACTAG
Upstream 100 bases:
>100_bases TAGTACACCTTGACTGCTAAAATATTTCTATAAATTAATTTGACTTTCCTGATAGAGTTGTTCACATCTTATTTCAATTC ACTATAGAAGGAGGAAAAGG
Downstream 100 bases:
>100_bases ATCTACAAACACATCGCTCCTGTTTACGTCATTGCTATCGTGGATAGTAATTATTTCTCAGATGACCTGGCTTTTCATAG CTTTAGTATGCGCGAAGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MILRHLGISPTNDLVAKKIFSNPEITCQFIRDMLDLPAKNVTILEGSDIHVLLSMPYSVQDFYTSIDVLAELDNGTQVII EIQVHHQNFFINHLWAYLCSQVNQNLEKIHQREGDTH
Sequences:
>Translated_117_residues MILRHLGISPTNDLVAKKIFSNPEITCQFIRDMLDLPAKNVTILEGSDIHVLLSMPYSVQDFYTSIDVLAELDNGTQVII EIQVHHQNFFINHLWAYLCSQVNQNLEKIHQREGDTH >Mature_117_residues MILRHLGISPTNDLVAKKIFSNPEITCQFIRDMLDLPAKNVTILEGSDIHVLLSMPYSVQDFYTSIDVLAELDNGTQVII EIQVHHQNFFINHLWAYLCSQVNQNLEKIHQREGDTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13457; Mature: 13457
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILRHLGISPTNDLVAKKIFSNPEITCQFIRDMLDLPAKNVTILEGSDIHVLLSMPYSVQ CEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCHH DFYTSIDVLAELDNGTQVIIEIQVHHQNFFINHLWAYLCSQVNQNLEKIHQREGDTH HHHHHHHHHHCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MILRHLGISPTNDLVAKKIFSNPEITCQFIRDMLDLPAKNVTILEGSDIHVLLSMPYSVQ CEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCHH DFYTSIDVLAELDNGTQVIIEIQVHHQNFFINHLWAYLCSQVNQNLEKIHQREGDTH HHHHHHHHHHCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA