| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is yeiH [C]
Identifier: 116516491
GI number: 116516491
Start: 34652
End: 35662
Strand: Reverse
Name: yeiH [C]
Synonym: SPD_0040
Alternate gene names: 116516491
Gene position: 35662-34652 (Counterclockwise)
Preceding gene: 116517042
Following gene: 116517001
Centisome position: 1.74
GC content: 46.39
Gene sequence:
>1011_bases ATGTCATTTCTATCAAAAAATGGAGCAGGTATCTTGGCCTGCCTTCTCATTTCCATCCTATCTTGGTACTTAGGAGGATT CTTCCCTGTGATTGGCGCGCCCGTTTTTGCCATTTTCATAGGCATGCTCCTACATCCCTTTCTCTCGTCCTATAAACAAC TGGATGCTGGTTTGACCTTTAGTTCCAAGAAGTTGCTCCAATATGCCGTTGTCTTGCTTGGTTTTGGTCTCAATATCTCG CAGGTCTTCGCAGTTGGCCAATCTTCACTCCCTGTCATCCTGTCCACTATCTCAATAGCTCTGATTATTGCCTACCTCTT CCAGCGTTTCTTTGCACTGGATACAAAACTGGCTACCTTGGTTGGAGTAGGTTCTTCTATCTGTGGGGGTTCTGCCATTG CAGCGACAGCGCCTGTTATCCATGCTAAGGAAAAGGAAGTAGCCCAAGCCATTTCCGTTATCTTTTTCTTCAATGTCTTG GCTGCGCTCATCTTTCCAACCCTCGGCACCTGGCTTCATCTATCCAATGAAGGCTTCGCCCTCTTTGCAGGGACTGCGGT CAACGACACTTCCTCTGTAACGGCTGCCGCCAGCGCTTGGGACAGTCTTTACCAAAGCAATACCCTCGAGTCTGCAACCA TTGTTAAACTCACACGTACTTTGGCCATTATCCCTATCACGCTCTTTCTATCCTACTGGCAAAGTCGCCAACAAGAAAAC AAGCAAAGCCTACAACTGAAAAAAGTCTTCCCACTTTTTATCCTTTACTTTATCCTTGCCTCTCTCCTCACTACACTACT CACCTCTCTAGGTGTGTCCAGTAGTTTCTTTACCCCTCTCAAACAACTCTCTAAATTCCTTATTGTCATGGCCATGAGTG CTATCGGTCTCAAAACCAATCTGGTCGCTATGGTCAAATCCAGTGGAAAATCCATTCTTCTTGGAGCCATCTGCTGGATT GCCATCATCCTCACCACTCTTGGTATGCAGACCCTTATCGGCATTTTCTAA
Upstream 100 bases:
>100_bases CCCGACCGCAAAAATACATTAGAGAATAGCTTTCCACTTTCTATTTTACTTTTCCTGTTTATAGGTCTATAATGGTAATA GATTTTATTTGGAGGTTTTT
Downstream 100 bases:
>100_bases CACTCTTCGAAAATCTCTTCAAACCACGTCAACGTCGCCTTGCCGTATATATGTTACTGACTTCGTCAGTTCTATCTGCA ACCTCAAAACGGTGTTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MSFLSKNGAGILACLLISILSWYLGGFFPVIGAPVFAIFIGMLLHPFLSSYKQLDAGLTFSSKKLLQYAVVLLGFGLNIS QVFAVGQSSLPVILSTISIALIIAYLFQRFFALDTKLATLVGVGSSICGGSAIAATAPVIHAKEKEVAQAISVIFFFNVL AALIFPTLGTWLHLSNEGFALFAGTAVNDTSSVTAAASAWDSLYQSNTLESATIVKLTRTLAIIPITLFLSYWQSRQQEN KQSLQLKKVFPLFILYFILASLLTTLLTSLGVSSSFFTPLKQLSKFLIVMAMSAIGLKTNLVAMVKSSGKSILLGAICWI AIILTTLGMQTLIGIF
Sequences:
>Translated_336_residues MSFLSKNGAGILACLLISILSWYLGGFFPVIGAPVFAIFIGMLLHPFLSSYKQLDAGLTFSSKKLLQYAVVLLGFGLNIS QVFAVGQSSLPVILSTISIALIIAYLFQRFFALDTKLATLVGVGSSICGGSAIAATAPVIHAKEKEVAQAISVIFFFNVL AALIFPTLGTWLHLSNEGFALFAGTAVNDTSSVTAAASAWDSLYQSNTLESATIVKLTRTLAIIPITLFLSYWQSRQQEN KQSLQLKKVFPLFILYFILASLLTTLLTSLGVSSSFFTPLKQLSKFLIVMAMSAIGLKTNLVAMVKSSGKSILLGAICWI AIILTTLGMQTLIGIF >Mature_335_residues SFLSKNGAGILACLLISILSWYLGGFFPVIGAPVFAIFIGMLLHPFLSSYKQLDAGLTFSSKKLLQYAVVLLGFGLNISQ VFAVGQSSLPVILSTISIALIIAYLFQRFFALDTKLATLVGVGSSICGGSAIAATAPVIHAKEKEVAQAISVIFFFNVLA ALIFPTLGTWLHLSNEGFALFAGTAVNDTSSVTAAASAWDSLYQSNTLESATIVKLTRTLAIIPITLFLSYWQSRQQENK QSLQLKKVFPLFILYFILASLLTTLLTSLGVSSSFFTPLKQLSKFLIVMAMSAIGLKTNLVAMVKSSGKSILLGAICWIA IILTTLGMQTLIGIF
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=305, Percent_Identity=30.1639344262295, Blast_Score=117, Evalue=8e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 36019; Mature: 35888
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFLSKNGAGILACLLISILSWYLGGFFPVIGAPVFAIFIGMLLHPFLSSYKQLDAGLTF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SSKKLLQYAVVLLGFGLNISQVFAVGQSSLPVILSTISIALIIAYLFQRFFALDTKLATL HHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGVGSSICGGSAIAATAPVIHAKEKEVAQAISVIFFFNVLAALIFPTLGTWLHLSNEGFA HHCCCHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEE LFAGTAVNDTSSVTAAASAWDSLYQSNTLESATIVKLTRTLAIIPITLFLSYWQSRQQEN EEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQSLQLKKVFPLFILYFILASLLTTLLTSLGVSSSFFTPLKQLSKFLIVMAMSAIGLKTN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHH LVAMVKSSGKSILLGAICWIAIILTTLGMQTLIGIF HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SFLSKNGAGILACLLISILSWYLGGFFPVIGAPVFAIFIGMLLHPFLSSYKQLDAGLTF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SSKKLLQYAVVLLGFGLNISQVFAVGQSSLPVILSTISIALIIAYLFQRFFALDTKLATL HHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGVGSSICGGSAIAATAPVIHAKEKEVAQAISVIFFFNVLAALIFPTLGTWLHLSNEGFA HHCCCHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEE LFAGTAVNDTSSVTAAASAWDSLYQSNTLESATIVKLTRTLAIIPITLFLSYWQSRQQEN EEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQSLQLKKVFPLFILYFILASLLTTLLTSLGVSSSFFTPLKQLSKFLIVMAMSAIGLKTN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHH LVAMVKSSGKSILLGAICWIAIILTTLGMQTLIGIF HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11463916 [H]