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The map label for this gene is 116516793

Identifier: 116516793

GI number: 116516793

Start: 1708606

End: 1709835

Strand: Direct

Name: 116516793

Synonym: SPD_1708

Alternate gene names: NA

Gene position: 1708606-1709835 (Clockwise)

Preceding gene: 116516443

Following gene: 116516150

Centisome position: 83.5

GC content: 37.15

Gene sequence:

>1230_bases
ATGGAACAATTACATTTTATCACAAAATTACTAGACATTAAAGACCCTAATATCCAGATTTTAGACATCATCAATAAGGA
TACACACAAGGAAATCATCGCCAAACTGGACTACGACGCCCCATCTTGCCCTGAGTGCGGAAGTCAAATGAAGAAATATG
ACTTTCAAAAACCTTCTAAAATTCCTTATCTTGAAACGACTGGTATGCCTACTAGAATTCTCCTTAGAAAGCGTCGATTC
AAGTGTTATCACTGTTCAAAAATGATGGTCGCTGAAACTTCTATCGTCAAGAAGAATCACCAAATCCCTCGTATTATCAA
CCAAAAAATTGCGCAAAAGTTAATTGAAAAGATTTCTATGACCGATATTGCCCATCAGCTTTCCATCTCAACTTCAACTG
TTATTCGTAAGCTCAATGATTTTCACTTTAAACATGATTTTTCTTGTCTTCCTGAGATTATGTCTTGGGATGAGTATGCT
TTTACAAAGGGAAAGATGAGCTTCATTGCGCAAGATTTTAACAATCTCAATATCATCACTGTTCTTGAGGGAAGAACACA
AGCTGTCATCCGAGATCACTTTCTTAAATATGATAGAGCCGTCCGATGTCGCGTCAAAATTATTACTATGGATATGTTTA
GCCCTTACTATGGCTTGGCTAAACAGCTTCGCTTTCACATTGTACAACATCTTAGCCGTGCTATGAGTCGTGTGCGTGTC
CAAATCATGAATCAGTTTCATCGAAAATCCCATGAATACAAGGCTATCAAGCGCTACTGGAAACTCATTCAACAGGATAG
CCGTAAACTGAGTGATAAGCAATTTTATCGTCCTACTTTTCGTATGCATTTAACCAATAAAGAGATTTTAAACAAGCTTT
TGAGCTATTCGGAAGACTTGAAACATCACTATCAGCTCTATCAGCTCTTGCTTTTTCACTTCCAGAATAAGGAACCAGAG
AAATTTTTCGGACTTATTGAGGACAATCTTAAGCAGGTTCATCCTATTTTTCAGACTGTCTTTAAAACCTTCCTCAAAGA
TAAAGAAAAGATTGTCAACGCCCTTCAACTACACTATTCTAACGCCAAACCGGAAGCGACCAATAATCTCATCAAACTTA
TCAAGCGCAATGCCTTTGGTTTTCGAAACTTTGAAAACTTCAAAAAACGGATTTTTATCGCTTTGAACATCAAAAAAGAA
AGGACGAAATTTGTCCTTTCTCGAGCTTAG

Upstream 100 bases:

>100_bases
TAACCCCCCTATGGATATTATGGAGCCTATTTTGTGTAGAAAAAAAGTCCCATATGACCTATAATGAAAAGCGACCAAAC
AACTCATTAGAAAGAATCAT

Downstream 100 bases:

>100_bases
CTGACTTCAACCCACTACAGTTGACAAAGAGCCTATAAAAAGAAGGGTTAGTCATTCCCTCCTTTTGTGTTTTTTATAAG
TTGTTTTCTATAGAAAGCTT

Product: IS1167, transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MEQLHFITKLLDIKDPNIQILDIINKDTHKEIIAKLDYDAPSCPECGSQMKKYDFQKPSKIPYLETTGMPTRILLRKRRF
KCYHCSKMMVAETSIVKKNHQIPRIINQKIAQKLIEKISMTDIAHQLSISTSTVIRKLNDFHFKHDFSCLPEIMSWDEYA
FTKGKMSFIAQDFNNLNIITVLEGRTQAVIRDHFLKYDRAVRCRVKIITMDMFSPYYGLAKQLRFHIVQHLSRAMSRVRV
QIMNQFHRKSHEYKAIKRYWKLIQQDSRKLSDKQFYRPTFRMHLTNKEILNKLLSYSEDLKHHYQLYQLLLFHFQNKEPE
KFFGLIEDNLKQVHPIFQTVFKTFLKDKEKIVNALQLHYSNAKPEATNNLIKLIKRNAFGFRNFENFKKRIFIALNIKKE
RTKFVLSRA

Sequences:

>Translated_409_residues
MEQLHFITKLLDIKDPNIQILDIINKDTHKEIIAKLDYDAPSCPECGSQMKKYDFQKPSKIPYLETTGMPTRILLRKRRF
KCYHCSKMMVAETSIVKKNHQIPRIINQKIAQKLIEKISMTDIAHQLSISTSTVIRKLNDFHFKHDFSCLPEIMSWDEYA
FTKGKMSFIAQDFNNLNIITVLEGRTQAVIRDHFLKYDRAVRCRVKIITMDMFSPYYGLAKQLRFHIVQHLSRAMSRVRV
QIMNQFHRKSHEYKAIKRYWKLIQQDSRKLSDKQFYRPTFRMHLTNKEILNKLLSYSEDLKHHYQLYQLLLFHFQNKEPE
KFFGLIEDNLKQVHPIFQTVFKTFLKDKEKIVNALQLHYSNAKPEATNNLIKLIKRNAFGFRNFENFKKRIFIALNIKKE
RTKFVLSRA
>Mature_409_residues
MEQLHFITKLLDIKDPNIQILDIINKDTHKEIIAKLDYDAPSCPECGSQMKKYDFQKPSKIPYLETTGMPTRILLRKRRF
KCYHCSKMMVAETSIVKKNHQIPRIINQKIAQKLIEKISMTDIAHQLSISTSTVIRKLNDFHFKHDFSCLPEIMSWDEYA
FTKGKMSFIAQDFNNLNIITVLEGRTQAVIRDHFLKYDRAVRCRVKIITMDMFSPYYGLAKQLRFHIVQHLSRAMSRVRV
QIMNQFHRKSHEYKAIKRYWKLIQQDSRKLSDKQFYRPTFRMHLTNKEILNKLLSYSEDLKHHYQLYQLLLFHFQNKEPE
KFFGLIEDNLKQVHPIFQTVFKTFLKDKEKIVNALQLHYSNAKPEATNNLIKLIKRNAFGFRNFENFKKRIFIALNIKKE
RTKFVLSRA

Specific function: Unknown

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 48900; Mature: 48900

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQLHFITKLLDIKDPNIQILDIINKDTHKEIIAKLDYDAPSCPECGSQMKKYDFQKPSK
CCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCC
IPYLETTGMPTRILLRKRRFKCYHCSKMMVAETSIVKKNHQIPRIINQKIAQKLIEKISM
CCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
TDIAHQLSISTSTVIRKLNDFHFKHDFSCLPEIMSWDEYAFTKGKMSFIAQDFNNLNIIT
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHCCHHHHHHHHCCCCCEEEE
VLEGRTQAVIRDHFLKYDRAVRCRVKIITMDMFSPYYGLAKQLRFHIVQHLSRAMSRVRV
EECCCHHHHHHHHHHHHCCCEEEEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QIMNQFHRKSHEYKAIKRYWKLIQQDSRKLSDKQFYRPTFRMHLTNKEILNKLLSYSEDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHEEEECCHHHHHHHHHHHHHH
KHHYQLYQLLLFHFQNKEPEKFFGLIEDNLKQVHPIFQTVFKTFLKDKEKIVNALQLHYS
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NAKPEATNNLIKLIKRNAFGFRNFENFKKRIFIALNIKKERTKFVLSRA
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHEEEEEEEECHHHHHHHHCCC
>Mature Secondary Structure
MEQLHFITKLLDIKDPNIQILDIINKDTHKEIIAKLDYDAPSCPECGSQMKKYDFQKPSK
CCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCC
IPYLETTGMPTRILLRKRRFKCYHCSKMMVAETSIVKKNHQIPRIINQKIAQKLIEKISM
CCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
TDIAHQLSISTSTVIRKLNDFHFKHDFSCLPEIMSWDEYAFTKGKMSFIAQDFNNLNIIT
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHCCHHHHHHHHCCCCCEEEE
VLEGRTQAVIRDHFLKYDRAVRCRVKIITMDMFSPYYGLAKQLRFHIVQHLSRAMSRVRV
EECCCHHHHHHHHHHHHCCCEEEEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QIMNQFHRKSHEYKAIKRYWKLIQQDSRKLSDKQFYRPTFRMHLTNKEILNKLLSYSEDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHEEEECCHHHHHHHHHHHHHH
KHHYQLYQLLLFHFQNKEPEKFFGLIEDNLKQVHPIFQTVFKTFLKDKEKIVNALQLHYS
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NAKPEATNNLIKLIKRNAFGFRNFENFKKRIFIALNIKKERTKFVLSRA
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHEEEEEEEECHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8387149 [H]