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The map label for this gene is 116516443

Identifier: 116516443

GI number: 116516443

Start: 1707353

End: 1707886

Strand: Direct

Name: 116516443

Synonym: SPD_1706

Alternate gene names: NA

Gene position: 1707353-1707886 (Clockwise)

Preceding gene: 116516281

Following gene: 116516793

Centisome position: 83.44

GC content: 38.01

Gene sequence:

>534_bases
ATGAAGCTTCCAAAAGAAGGCGACTTTATTACAATTCAAAGTTATAAGCATGATGGGAGTCTCCACCGAACTTGGCGGGA
CACCATGGTACTAAAAACAACAGAAAACGCCATTATTGGTGTCAACGATCATACACTTGTTACCGAAAGTGATGGTCGTC
GTTGGGTCACTCGAGAACCGGCTATTGTTTACTTTCACAAGAAATATTGGTTTAATATCATTGCCATGATTCGTGATAAT
GGAACTTCTTACTATTGCAATATGGCTAGCCCCTACTATCTGGATGAAGAAGCACTGAAGTATATTGATTACGATTTGGA
TGTTAAAATTTTTACAGATGGGGAAAAACGTCTCTTGGACGTTGAAGAGTACGAGCGTCACAAACGCAAAATGAATTATT
CTGATGACTTGGACTATATTTTAAAAGAACATGTCAAAATTCTTGTTGATTGGATTAACAATGGACGTGGTCCTTTCTCA
GAAGCCTATGTAAACATTTGGTACAAGCGCTATGTAGAACTAAAGAATCGGTAA

Upstream 100 bases:

>100_bases
GAATATCTTTAATATTTCCAAGTGAAATTCACAGATTTTAGGTAATTTTATGGTACAATAGTAAATGATAAACTTATAAA
TTGTAGAAAGTTGGTTAGTT

Downstream 100 bases:

>100_bases
AGTTGTCAAAGGTCAGGAACAAAATCCTGACCTTTTTTGGTAGTATAAAATAAATTGTGTAAACACAAAAAGGAATAAAT
CTATTATAGCAGAGTTACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MKLPKEGDFITIQSYKHDGSLHRTWRDTMVLKTTENAIIGVNDHTLVTESDGRRWVTREPAIVYFHKKYWFNIIAMIRDN
GTSYYCNMASPYYLDEEALKYIDYDLDVKIFTDGEKRLLDVEEYERHKRKMNYSDDLDYILKEHVKILVDWINNGRGPFS
EAYVNIWYKRYVELKNR

Sequences:

>Translated_177_residues
MKLPKEGDFITIQSYKHDGSLHRTWRDTMVLKTTENAIIGVNDHTLVTESDGRRWVTREPAIVYFHKKYWFNIIAMIRDN
GTSYYCNMASPYYLDEEALKYIDYDLDVKIFTDGEKRLLDVEEYERHKRKMNYSDDLDYILKEHVKILVDWINNGRGPFS
EAYVNIWYKRYVELKNR
>Mature_177_residues
MKLPKEGDFITIQSYKHDGSLHRTWRDTMVLKTTENAIIGVNDHTLVTESDGRRWVTREPAIVYFHKKYWFNIIAMIRDN
GTSYYCNMASPYYLDEEALKYIDYDLDVKIFTDGEKRLLDVEEYERHKRKMNYSDDLDYILKEHVKILVDWINNGRGPFS
EAYVNIWYKRYVELKNR

Specific function: Unknown

COG id: COG3557

COG function: function code J; Uncharacterized domain/protein associated with RNAses G and E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0374 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1706_STRP2 (Q04IQ6)

Other databases:

- EMBL:   CP000410
- RefSeq:   YP_817132.1
- ProteinModelPortal:   Q04IQ6
- STRING:   Q04IQ6
- EnsemblBacteria:   EBSTRT00000019543
- GeneID:   4442562
- GenomeReviews:   CP000410_GR
- KEGG:   spd:SPD_1706
- eggNOG:   COG3557
- GeneTree:   EBGT00050000027804
- HOGENOM:   HBG288296
- OMA:   RTWVTRE
- ProtClustDB:   PRK13662
- HAMAP:   MF_01568
- InterPro:   IPR007295
- InterPro:   IPR016882
- PIRSF:   PIRSF028345

Pfam domain/function: PF04167 DUF402

EC number: NA

Molecular weight: Translated: 21338; Mature: 21338

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLPKEGDFITIQSYKHDGSLHRTWRDTMVLKTTENAIIGVNDHTLVTESDGRRWVTREP
CCCCCCCCEEEEEEECCCCCEEEEECCEEEEEECCCEEEECCCCEEEECCCCCEEEECCC
AIVYFHKKYWFNIIAMIRDNGTSYYCNMASPYYLDEEALKYIDYDLDVKIFTDGEKRLLD
EEEEEEHHHHEEEEEEEECCCCEEEEECCCCEEECHHHHHHCCCCCEEEEEECCCCEEEC
VEEYERHKRKMNYSDDLDYILKEHVKILVDWINNGRGPFSEAYVNIWYKRYVELKNR
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEECCC
>Mature Secondary Structure
MKLPKEGDFITIQSYKHDGSLHRTWRDTMVLKTTENAIIGVNDHTLVTESDGRRWVTREP
CCCCCCCCEEEEEEECCCCCEEEEECCEEEEEECCCEEEECCCCEEEECCCCCEEEECCC
AIVYFHKKYWFNIIAMIRDNGTSYYCNMASPYYLDEEALKYIDYDLDVKIFTDGEKRLLD
EEEEEEHHHHEEEEEEEECCCCEEEEECCCCEEECHHHHHHCCCCCEEEEEECCCCEEEC
VEEYERHKRKMNYSDDLDYILKEHVKILVDWINNGRGPFSEAYVNIWYKRYVELKNR
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA