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The map label for this gene is yabB [H]

Identifier: 116516448

GI number: 116516448

Start: 1379242

End: 1379991

Strand: Reverse

Name: yabB [H]

Synonym: SPD_1365

Alternate gene names: 116516448

Gene position: 1379991-1379242 (Counterclockwise)

Preceding gene: 116516485

Following gene: 116515348

Centisome position: 67.44

GC content: 41.6

Gene sequence:

>750_bases
ATGGAAGAAGAACAATTATTAAAATCAGGAGAGCGCATTAACCAGCTCTTTTCGACAGATATCAAAATCATTCAAAATAG
AGAGGTTTTTAGCTATTCGGTGGATAGTGTTCTCTTATCACGATTTCCACGTTTTCCTAAGAAGGGGTTGATTGTGGATT
TCTGTGCTGGGAATGGAGCAGTGGGGCTTTTTGCTAGCACTCGTACTCAAGCACAGATATTGTCTGTTGAGATTCAGGAG
CGTTTGGCGGATATGGCTGAACGCTCTGTCCGTTTGAATGGATTAGAGGAGCAAATGCAGGTCATCTGCGATGATTTGAA
AAATATGCCTGCTCACATTCAGGGGAGTAAGGTGGATATGATTTTGTGTAATCCACCCTATTTCAAGGTGGATCCTTATT
CTAATCTGAACGAGAGTGAACATTATCTCTTGGCTCGACACGAAATCACGACTAATTTGGAAGAAATCTGTCATAGTGCC
CAGAGTATTCTCAAGTCTAATGGGCGTTTGGCCATGGTTCATCGTCCTGATCGACTTCTGGATATTTTGGATACGTTAAA
ACGACATAATCTAGCCCCTAAGCGCCTGCAGTTTGTTTATCCAAAAAGAGAAAAGGAAGCCAATATGCTTTTGATTGAGG
CGATCAAGGATGGCTCAACAAGTGGCTTTAAGGTCTTACCTCCTTTGATTGTCCACAATGATGATGGCTCTTATACGCCC
GAAATCGAAGAGATTTATTATGGATCATAA

Upstream 100 bases:

>100_bases
CAATCTGGACTGGAGAAGCCCTGCACCATTTAAAAAAGAAGAAGTAGTTTAGAGTTTTATATTTTTTGTAATGTTAATAT
AAATTTGCTATAATAGGACC

Downstream 100 bases:

>100_bases
GGCTTATATGTACGTTCTGGAGTGTCGTGATGGATCCTACTATATAGGCTATACGACTGATATGAGAAGACGCCTCGCTA
TCCACAATAGTGGGAAGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MEEEQLLKSGERINQLFSTDIKIIQNREVFSYSVDSVLLSRFPRFPKKGLIVDFCAGNGAVGLFASTRTQAQILSVEIQE
RLADMAERSVRLNGLEEQMQVICDDLKNMPAHIQGSKVDMILCNPPYFKVDPYSNLNESEHYLLARHEITTNLEEICHSA
QSILKSNGRLAMVHRPDRLLDILDTLKRHNLAPKRLQFVYPKREKEANMLLIEAIKDGSTSGFKVLPPLIVHNDDGSYTP
EIEEIYYGS

Sequences:

>Translated_249_residues
MEEEQLLKSGERINQLFSTDIKIIQNREVFSYSVDSVLLSRFPRFPKKGLIVDFCAGNGAVGLFASTRTQAQILSVEIQE
RLADMAERSVRLNGLEEQMQVICDDLKNMPAHIQGSKVDMILCNPPYFKVDPYSNLNESEHYLLARHEITTNLEEICHSA
QSILKSNGRLAMVHRPDRLLDILDTLKRHNLAPKRLQFVYPKREKEANMLLIEAIKDGSTSGFKVLPPLIVHNDDGSYTP
EIEEIYYGS
>Mature_249_residues
MEEEQLLKSGERINQLFSTDIKIIQNREVFSYSVDSVLLSRFPRFPKKGLIVDFCAGNGAVGLFASTRTQAQILSVEIQE
RLADMAERSVRLNGLEEQMQVICDDLKNMPAHIQGSKVDMILCNPPYFKVDPYSNLNESEHYLLARHEITTNLEEICHSA
QSILKSNGRLAMVHRPDRLLDILDTLKRHNLAPKRLQFVYPKREKEANMLLIEAIKDGSTSGFKVLPPLIVHNDDGSYTP
EIEEIYYGS

Specific function: Unknown

COG id: COG4123

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS [H]

EC number: NA

Molecular weight: Translated: 28349; Mature: 28349

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEEQLLKSGERINQLFSTDIKIIQNREVFSYSVDSVLLSRFPRFPKKGLIVDFCAGNGA
CCHHHHHHHHHHHHHHHHHHHHHEECCCCEEHHHHHHHHHHCCCCCCCCCEEEEECCCCC
VGLFASTRTQAQILSVEIQERLADMAERSVRLNGLEEQMQVICDDLKNMPAHIQGSKVDM
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEE
ILCNPPYFKVDPYSNLNESEHYLLARHEITTNLEEICHSAQSILKSNGRLAMVHRPDRLL
EEECCCCEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHH
DILDTLKRHNLAPKRLQFVYPKREKEANMLLIEAIKDGSTSGFKVLPPLIVHNDDGSYTP
HHHHHHHHCCCCHHHHEEECCCCCCCCCEEEEEEECCCCCCCEEECCCEEEECCCCCCCC
EIEEIYYGS
CHHHHCCCC
>Mature Secondary Structure
MEEEQLLKSGERINQLFSTDIKIIQNREVFSYSVDSVLLSRFPRFPKKGLIVDFCAGNGA
CCHHHHHHHHHHHHHHHHHHHHHEECCCCEEHHHHHHHHHHCCCCCCCCCEEEEECCCCC
VGLFASTRTQAQILSVEIQERLADMAERSVRLNGLEEQMQVICDDLKNMPAHIQGSKVDM
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEE
ILCNPPYFKVDPYSNLNESEHYLLARHEITTNLEEICHSAQSILKSNGRLAMVHRPDRLL
EEECCCCEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHH
DILDTLKRHNLAPKRLQFVYPKREKEANMLLIEAIKDGSTSGFKVLPPLIVHNDDGSYTP
HHHHHHHHCCCCHHHHEEECCCCCCCCCEEEEEEECCCCCCCEEECCCEEEECCCCCCCC
EIEEIYYGS
CHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]