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The map label for this gene is yhbQ [C]

Identifier: 116515348

GI number: 116515348

Start: 1378953

End: 1379252

Strand: Reverse

Name: yhbQ [C]

Synonym: SPD_1364

Alternate gene names: 116515348

Gene position: 1379252-1378953 (Counterclockwise)

Preceding gene: 116516448

Following gene: 116516825

Centisome position: 67.41

GC content: 42.0

Gene sequence:

>300_bases
ATGGATCATAAGGCTTATATGTACGTTCTGGAGTGTCGTGATGGATCCTACTATATAGGCTATACGACTGATATGAGAAG
ACGCCTCGCTATCCACAATAGTGGGAAGGGAGCCAAATATACACGAGCACGCTTGCCAGTCAAACTTATCTATGCTCAAG
GTTTTGCCAGTAAGGAAGAAGCCATGTCGGCTGAAGCTCTTTTCAAGCGTAAGAAGAGGCCACAGAAGGAAGAATTTTTA
TCTGAAAATCAAGATAGAAATTTACTCAGTTATTTTGAAGAATCGTGGGGAGTCCTTTGA

Upstream 100 bases:

>100_bases
GCGATCAAGGATGGCTCAACAAGTGGCTTTAAGGTCTTACCTCCTTTGATTGTCCACAATGATGATGGCTCTTATACGCC
CGAAATCGAAGAGATTTATT

Downstream 100 bases:

>100_bases
CTCCTCTTACCTTTGTCAAAAAGCGAAAAAAATGCTACAATAAAGAAAATAAACAAAATGAGGTATTATCATGTCCAAGA
TTCTAGTATTTGGTCACCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MDHKAYMYVLECRDGSYYIGYTTDMRRRLAIHNSGKGAKYTRARLPVKLIYAQGFASKEEAMSAEALFKRKKRPQKEEFL
SENQDRNLLSYFEESWGVL

Sequences:

>Translated_99_residues
MDHKAYMYVLECRDGSYYIGYTTDMRRRLAIHNSGKGAKYTRARLPVKLIYAQGFASKEEAMSAEALFKRKKRPQKEEFL
SENQDRNLLSYFEESWGVL
>Mature_99_residues
MDHKAYMYVLECRDGSYYIGYTTDMRRRLAIHNSGKGAKYTRARLPVKLIYAQGFASKEEAMSAEALFKRKKRPQKEEFL
SENQDRNLLSYFEESWGVL

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1364_STRP2 (Q04JL4)

Other databases:

- EMBL:   CP000410
- RefSeq:   YP_816824.1
- ProteinModelPortal:   Q04JL4
- SMR:   Q04JL4
- STRING:   Q04JL4
- EnsemblBacteria:   EBSTRT00000019586
- GeneID:   4441090
- GenomeReviews:   CP000410_GR
- KEGG:   spd:SPD_1364
- eggNOG:   COG2827
- GeneTree:   EBGT00050000027357
- HOGENOM:   HBG678874
- OMA:   EKEATHE
- ProtClustDB:   CLSK560132
- GO:   GO:0005622
- InterPro:   IPR000305

Pfam domain/function: PF01541 GIY-YIG; SSF82771 UvrC_N

EC number: NA

Molecular weight: Translated: 11653; Mature: 11653

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHKAYMYVLECRDGSYYIGYTTDMRRRLAIHNSGKGAKYTRARLPVKLIYAQGFASKEE
CCCCEEEEEEEECCCCEEEEECHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCCCHHH
AMSAEALFKRKKRPQKEEFLSENQDRNLLSYFEESWGVL
HHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MDHKAYMYVLECRDGSYYIGYTTDMRRRLAIHNSGKGAKYTRARLPVKLIYAQGFASKEE
CCCCEEEEEEEECCCCEEEEECHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCCCHHH
AMSAEALFKRKKRPQKEEFLSENQDRNLLSYFEESWGVL
HHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA