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The map label for this gene is yclN [H]

Identifier: 116515914

GI number: 116515914

Start: 1663569

End: 1664528

Strand: Direct

Name: yclN [H]

Synonym: SPD_1649

Alternate gene names: 116515914

Gene position: 1663569-1664528 (Clockwise)

Preceding gene: 116515575

Following gene: 116517018

Centisome position: 81.3

GC content: 46.04

Gene sequence:

>960_bases
ATGAAACTTTCTCATTATTTAATTGGCTTACTTCTACTCCTAGTCTTTCTCTCTATTAGCATTGGGACCAGTGATTTTTC
ATGGGGAAAGCTATTTGATTTCGACCAGCAGACCTGGCTCCTCTTTCAAGAGTCCCGTCTCCCAAGAACTATCAGTATTC
TCCTGACTGCCTCTAGTATGAGTATGGCAGGCCTTCTCATGCAGACTATTACCCAAAATCAGTTTGCTGCACCGAGTACA
GTTGGAACGACTGAAGCCGCCAAACTGGGAATGGTGCTGAGCCTTTTTGTCTTTCCATCGGCTAGTCTGACCCAAAAGAT
GCTCTTCGCTTTTGTTTCATCCATCGTATTCACCCTCTTCTTCCTAGCCTTTATGACCATTTTTACTGTAAAGGAAAGGT
GGATGTTGCCTCTGATTGGGATCATCTATAGCGGGATTATCGGCTCAGTCACAGAAGTTATCGCCTATCGTTTCAATCTG
GTTCAGAGTATGACTGCCTGGACCCAGGGCTCCTTCTCCATGATTCAGACCCATCAGTATGAGTGGCTCTTCTTAGGCCT
CATCATCCTGATAACCGTTTGGAAATTATCCCAAACCTTCACCATCATGAATCTAGGGAAAGAAACCAGCGAGAGTTTGG
GGATTTCCTACTCCCTACTTGAAAAACTGGCCCTCTTTCTGGTGGCGCTAACGACAAGCGTCACCATGATTACCGTGGGT
GGCCTACCATTTCTCGGAGTTATCGTTCCCAATCTTGTTCGCAAGCGCTATGGAGATAATCTAAGTCAAACCAAACTCAT
GGTCGCACTGGTTGGTGCCAATCTAGTTCTGGCTTGCGATATCCTATCCCGAGTTCTGATTAGGCCCTATGAGTTGTCTG
TCAGTCTCTTGCTAGGAATCATCGGTAGTCTCGTCTTTATCCTACTTCTCTGGAGAGGGGGACGAAAAGATGCAGACTAA

Upstream 100 bases:

>100_bases
TATTAAATTGTCAGAAATTTTATTGACAGATTAGAAAAATAATGTTACATTTATATCCGCAGGTATCTTTCGATACCAAA
TCTACATGAAAGGACGGGGT

Downstream 100 bases:

>100_bases
AAGCAAACATACCAAGCTCTTCTGGATTCTCATTATTCTTGCCATCGGAGCTTGTCTTCTCTACTTTTGGCCCATCACTC
ACTTGTCAGCCTTTGCTTGG

Product: iron-compound ABC transporter permease

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MKLSHYLIGLLLLLVFLSISIGTSDFSWGKLFDFDQQTWLLFQESRLPRTISILLTASSMSMAGLLMQTITQNQFAAPST
VGTTEAAKLGMVLSLFVFPSASLTQKMLFAFVSSIVFTLFFLAFMTIFTVKERWMLPLIGIIYSGIIGSVTEVIAYRFNL
VQSMTAWTQGSFSMIQTHQYEWLFLGLIILITVWKLSQTFTIMNLGKETSESLGISYSLLEKLALFLVALTTSVTMITVG
GLPFLGVIVPNLVRKRYGDNLSQTKLMVALVGANLVLACDILSRVLIRPYELSVSLLLGIIGSLVFILLLWRGGRKDAD

Sequences:

>Translated_319_residues
MKLSHYLIGLLLLLVFLSISIGTSDFSWGKLFDFDQQTWLLFQESRLPRTISILLTASSMSMAGLLMQTITQNQFAAPST
VGTTEAAKLGMVLSLFVFPSASLTQKMLFAFVSSIVFTLFFLAFMTIFTVKERWMLPLIGIIYSGIIGSVTEVIAYRFNL
VQSMTAWTQGSFSMIQTHQYEWLFLGLIILITVWKLSQTFTIMNLGKETSESLGISYSLLEKLALFLVALTTSVTMITVG
GLPFLGVIVPNLVRKRYGDNLSQTKLMVALVGANLVLACDILSRVLIRPYELSVSLLLGIIGSLVFILLLWRGGRKDAD
>Mature_319_residues
MKLSHYLIGLLLLLVFLSISIGTSDFSWGKLFDFDQQTWLLFQESRLPRTISILLTASSMSMAGLLMQTITQNQFAAPST
VGTTEAAKLGMVLSLFVFPSASLTQKMLFAFVSSIVFTLFFLAFMTIFTVKERWMLPLIGIIYSGIIGSVTEVIAYRFNL
VQSMTAWTQGSFSMIQTHQYEWLFLGLIILITVWKLSQTFTIMNLGKETSESLGISYSLLEKLALFLVALTTSVTMITVG
GLPFLGVIVPNLVRKRYGDNLSQTKLMVALVGANLVLACDILSRVLIRPYELSVSLLLGIIGSLVFILLLWRGGRKDAD

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG4606

COG function: function code P; ABC-type enterochelin transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=305, Percent_Identity=27.5409836065574, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1790741, Length=278, Percent_Identity=28.0575539568345, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1786805, Length=283, Percent_Identity=26.8551236749117, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1788004, Length=229, Percent_Identity=24.0174672489083, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1786347, Length=313, Percent_Identity=25.5591054313099, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 35419; Mature: 35419

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSHYLIGLLLLLVFLSISIGTSDFSWGKLFDFDQQTWLLFQESRLPRTISILLTASSM
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCEEEEECCCCCCEEEEEEEHHHH
SMAGLLMQTITQNQFAAPSTVGTTEAAKLGMVLSLFVFPSASLTQKMLFAFVSSIVFTLF
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
FLAFMTIFTVKERWMLPLIGIIYSGIIGSVTEVIAYRFNLVQSMTAWTQGSFSMIQTHQY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCH
EWLFLGLIILITVWKLSQTFTIMNLGKETSESLGISYSLLEKLALFLVALTTSVTMITVG
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEC
GLPFLGVIVPNLVRKRYGDNLSQTKLMVALVGANLVLACDILSRVLIRPYELSVSLLLGI
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHH
IGSLVFILLLWRGGRKDAD
HHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKLSHYLIGLLLLLVFLSISIGTSDFSWGKLFDFDQQTWLLFQESRLPRTISILLTASSM
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCEEEEECCCCCCEEEEEEEHHHH
SMAGLLMQTITQNQFAAPSTVGTTEAAKLGMVLSLFVFPSASLTQKMLFAFVSSIVFTLF
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
FLAFMTIFTVKERWMLPLIGIIYSGIIGSVTEVIAYRFNLVQSMTAWTQGSFSMIQTHQY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCH
EWLFLGLIILITVWKLSQTFTIMNLGKETSESLGISYSLLEKLALFLVALTTSVTMITVG
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEC
GLPFLGVIVPNLVRKRYGDNLSQTKLMVALVGANLVLACDILSRVLIRPYELSVSLLLGI
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHH
IGSLVFILLLWRGGRKDAD
HHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]