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The map label for this gene is dps [H]

Identifier: 116515815

GI number: 116515815

Start: 1421028

End: 1421546

Strand: Reverse

Name: dps [H]

Synonym: SPD_1402

Alternate gene names: 116515815

Gene position: 1421546-1421028 (Counterclockwise)

Preceding gene: 116515853

Following gene: 116516966

Centisome position: 69.48

GC content: 41.43

Gene sequence:

>519_bases
ATGGTAGAATTGAAAAAAGAAGCAGTAAAAGACGTAACATCATTGACAAAAGCAGCGCCAGTAGCATTGGCAAAAACAAA
GGAAGTCTTGAACCAAGCTGTTGCTGATTTGTATGTAGCTCACGTTGCTTTGCACCAAGTGCACTGGTATATGCATGGTC
GTGGTTTCCTTGTATGGCATCCAAAAATGGATGAGTACATGGAAGCTCTTGACGGTCAATTGGATGAAATCAGCGAACGC
TTGATTACACTCGGTGGAAGCCCATTCTCTACATTGACAGAGTTCCTTCAAAATAGTGAAATCGAAGAAGAAGCTGGTGA
ATACCGTAATGTTGAAGAAAGCTTGGAACGTGTTCTTGTTATCTACCGTTACTTGTCAGAACTTTTCCAAAAAGGTTTGG
ATGTCACTGATGAAGAAGGTGACGATGTGACAAACGGTATCTTTGTAGGCGCTAAAACTGAAACAGATAAAACAATTTGG
ATGCTTGCAGCCGAACTTGGACAAGCACCTGGTTTGTAA

Upstream 100 bases:

>100_bases
CATATAAGTTCTTTTTCTTGCTATTGGTTTTCCTTAGTAGTATACTAAGGTAGTAATCATTAAGAAGTGGTTACAAAAAA
TAATGAATGAGGTAAAGAAA

Downstream 100 bases:

>100_bases
GAAATAAGGAAACATAGATAAATCTGTAGGAAATTTCTTACAGATTTTTTCTATTTTGTAAGCTATTCCAAACCAGTCTT
TTTTTGAGTTTTTTGATAAA

Product: non-heme iron-containing ferritin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MVELKKEAVKDVTSLTKAAPVALAKTKEVLNQAVADLYVAHVALHQVHWYMHGRGFLVWHPKMDEYMEALDGQLDEISER
LITLGGSPFSTLTEFLQNSEIEEEAGEYRNVEESLERVLVIYRYLSELFQKGLDVTDEEGDDVTNGIFVGAKTETDKTIW
MLAAELGQAPGL

Sequences:

>Translated_172_residues
MVELKKEAVKDVTSLTKAAPVALAKTKEVLNQAVADLYVAHVALHQVHWYMHGRGFLVWHPKMDEYMEALDGQLDEISER
LITLGGSPFSTLTEFLQNSEIEEEAGEYRNVEESLERVLVIYRYLSELFQKGLDVTDEEGDDVTNGIFVGAKTETDKTIW
MLAAELGQAPGL
>Mature_172_residues
MVELKKEAVKDVTSLTKAAPVALAKTKEVLNQAVADLYVAHVALHQVHWYMHGRGFLVWHPKMDEYMEALDGQLDEISER
LITLGGSPFSTLTEFLQNSEIEEEAGEYRNVEESLERVLVIYRYLSELFQKGLDVTDEEGDDVTNGIFVGAKTETDKTIW
MLAAELGQAPGL

Specific function: Protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction. It bi

COG id: COG0783

COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dps family [H]

Homologues:

None

Paralogues:

None

Copy number: 6720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002177
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331 [H]

Pfam domain/function: PF00210 Ferritin [H]

EC number: NA

Molecular weight: Translated: 19286; Mature: 19286

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVELKKEAVKDVTSLTKAAPVALAKTKEVLNQAVADLYVAHVALHQVHWYMHGRGFLVWH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
PKMDEYMEALDGQLDEISERLITLGGSPFSTLTEFLQNSEIEEEAGEYRNVEESLERVLV
CCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHH
IYRYLSELFQKGLDVTDEEGDDVTNGIFVGAKTETDKTIWMLAAELGQAPGL
HHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVELKKEAVKDVTSLTKAAPVALAKTKEVLNQAVADLYVAHVALHQVHWYMHGRGFLVWH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
PKMDEYMEALDGQLDEISERLITLGGSPFSTLTEFLQNSEIEEEAGEYRNVEESLERVLV
CCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHH
IYRYLSELFQKGLDVTDEEGDDVTNGIFVGAKTETDKTIWMLAAELGQAPGL
HHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA