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The map label for this gene is csbB [H]

Identifier: 116515490

GI number: 116515490

Start: 1447303

End: 1448256

Strand: Reverse

Name: csbB [H]

Synonym: SPD_1431

Alternate gene names: 116515490

Gene position: 1448256-1447303 (Counterclockwise)

Preceding gene: 116516336

Following gene: 116516758

Centisome position: 70.78

GC content: 42.03

Gene sequence:

>954_bases
ATGATGATTTCAATCATCGTCCCTTGTTTAAACGAAGAGGAAGTACTTCCTCTTTTTTATCAGGCTCTGGAAGCTTTACT
TCCAGATTTGGAAACAGAAATCGAGTATGTCTTTGTCGATGATGGATCAAGTGATGGGACCTTGGAACTCTTAAAGGCCT
ATCGGGAGCAAAATCCGGCAGTCCATTATATTTCTTTCTCTCGAAATTTTGGCAAAGAAGCAGCCCTTTATGCAGGCTTG
CAATATGCGACAGGAGATTTGGTGGTGGTGATGGATGCAGACCTCCAAGATCCTCCTAGTATGTTGTTTGAGATGAAAAA
TGTACTAGACAAAAATGTAGACTTGGACTGCGTTGGGACACGGAGAACTAGTCGGGAGGGAGAACCCTTCTTTCGCAGTT
TCTGTGCTGTTCTCTTTTATCGCCTCATGCAAAAAATCAGCCCAGTAGCTCTGCCGTCGGGTGTCCGTGATTTTCGTATG
ATGAGAAGGTCTGTGGTCGATGCCATTTTAAGCTTGACTGAGTCCAATCGTTTTTCTAAGGGACTCTTTGCCTGGGTCGG
CTTTAAAACCCACTATCTGGACTATCCAAATGTCGAAAGGCAGGCTGGCAAGACCAGTTGGAGTTTTAGGCAACTCTTTT
TTTACTCCATTGAAGGGATTGTTAATTTTTCAGATTTCCCTTTGACTATAGCCTTTGTAGCTGGTCTCCTATCTTGTTTT
CTTTCTCTGCTGATGACCTTTTTTGTTGTGGTTCGGACCCTCATTTTGGGCAATCCGACATCTGGTTGGACCTCTCTGAT
GGCTGTTATTCTCTTTCTTGGAGGCATTCAACTCTTGACCATTGGGATTCTCGGTAAGTATATCAGTAAGATTTATTTAG
AGACTAAAAAAAGACCACTTTATCTTATCAAAGAAAAAAGTGACCTTCCTGATTTTACAGAAAAAATAAAGTGA

Upstream 100 bases:

>100_bases
AAAGCAGAACTCGGTTGGGAAGCAGAACTCGACATCACCCAAATGTGTGAAGACGCATGGCGTTGGCAGAGCAAGCATCC
AAATGGATTTGAAGACTAAG

Downstream 100 bases:

>100_bases
AAAGACTATAATTTTACATGGAAATGTGCTAAACTAGAGGGAGTGGATTATCGCCATTGATTTAGGCTTCCTGGTTTCCA
ATCAGGGCGCGAGTTGGGCA

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MMISIIVPCLNEEEVLPLFYQALEALLPDLETEIEYVFVDDGSSDGTLELLKAYREQNPAVHYISFSRNFGKEAALYAGL
QYATGDLVVVMDADLQDPPSMLFEMKNVLDKNVDLDCVGTRRTSREGEPFFRSFCAVLFYRLMQKISPVALPSGVRDFRM
MRRSVVDAILSLTESNRFSKGLFAWVGFKTHYLDYPNVERQAGKTSWSFRQLFFYSIEGIVNFSDFPLTIAFVAGLLSCF
LSLLMTFFVVVRTLILGNPTSGWTSLMAVILFLGGIQLLTIGILGKYISKIYLETKKRPLYLIKEKSDLPDFTEKIK

Sequences:

>Translated_317_residues
MMISIIVPCLNEEEVLPLFYQALEALLPDLETEIEYVFVDDGSSDGTLELLKAYREQNPAVHYISFSRNFGKEAALYAGL
QYATGDLVVVMDADLQDPPSMLFEMKNVLDKNVDLDCVGTRRTSREGEPFFRSFCAVLFYRLMQKISPVALPSGVRDFRM
MRRSVVDAILSLTESNRFSKGLFAWVGFKTHYLDYPNVERQAGKTSWSFRQLFFYSIEGIVNFSDFPLTIAFVAGLLSCF
LSLLMTFFVVVRTLILGNPTSGWTSLMAVILFLGGIQLLTIGILGKYISKIYLETKKRPLYLIKEKSDLPDFTEKIK
>Mature_317_residues
MMISIIVPCLNEEEVLPLFYQALEALLPDLETEIEYVFVDDGSSDGTLELLKAYREQNPAVHYISFSRNFGKEAALYAGL
QYATGDLVVVMDADLQDPPSMLFEMKNVLDKNVDLDCVGTRRTSREGEPFFRSFCAVLFYRLMQKISPVALPSGVRDFRM
MRRSVVDAILSLTESNRFSKGLFAWVGFKTHYLDYPNVERQAGKTSWSFRQLFFYSIEGIVNFSDFPLTIAFVAGLLSCF
LSLLMTFFVVVRTLILGNPTSGWTSLMAVILFLGGIQLLTIGILGKYISKIYLETKKRPLYLIKEKSDLPDFTEKIK

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788692, Length=305, Percent_Identity=41.6393442622951, Blast_Score=243, Evalue=1e-65,
Organism=Escherichia coli, GI1788588, Length=306, Percent_Identity=28.7581699346405, Blast_Score=143, Evalue=1e-35,
Organism=Drosophila melanogaster, GI24585265, Length=176, Percent_Identity=28.9772727272727, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 35995; Mature: 35995

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMISIIVPCLNEEEVLPLFYQALEALLPDLETEIEYVFVDDGSSDGTLELLKAYREQNPA
CEEEEEECCCCCCCHHHHHHHHHHHHHCCHHCCEEEEEEECCCCCCHHHHHHHHHHCCCC
VHYISFSRNFGKEAALYAGLQYATGDLVVVMDADLQDPPSMLFEMKNVLDKNVDLDCVGT
EEEEEECCCCCCHHHHHHCCEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECC
RRTSREGEPFFRSFCAVLFYRLMQKISPVALPSGVRDFRMMRRSVVDAILSLTESNRFSK
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
GLFAWVGFKTHYLDYPNVERQAGKTSWSFRQLFFYSIEGIVNFSDFPLTIAFVAGLLSCF
HHHHHCCCHHEECCCCCCHHHCCCCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHH
LSLLMTFFVVVRTLILGNPTSGWTSLMAVILFLGGIQLLTIGILGKYISKIYLETKKRPL
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCE
YLIKEKSDLPDFTEKIK
EEEECCCCCCHHHHHCC
>Mature Secondary Structure
MMISIIVPCLNEEEVLPLFYQALEALLPDLETEIEYVFVDDGSSDGTLELLKAYREQNPA
CEEEEEECCCCCCCHHHHHHHHHHHHHCCHHCCEEEEEEECCCCCCHHHHHHHHHHCCCC
VHYISFSRNFGKEAALYAGLQYATGDLVVVMDADLQDPPSMLFEMKNVLDKNVDLDCVGT
EEEEEECCCCCCHHHHHHCCEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECC
RRTSREGEPFFRSFCAVLFYRLMQKISPVALPSGVRDFRMMRRSVVDAILSLTESNRFSK
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
GLFAWVGFKTHYLDYPNVERQAGKTSWSFRQLFFYSIEGIVNFSDFPLTIAFVAGLLSCF
HHHHHCCCHHEECCCCCCHHHCCCCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHH
LSLLMTFFVVVRTLILGNPTSGWTSLMAVILFLGGIQLLTIGILGKYISKIYLETKKRPL
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCE
YLIKEKSDLPDFTEKIK
EEEECCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]