Click here to switch to the map view.

The map label for this gene is engB [H]

Identifier: 116515393

GI number: 116515393

Start: 1418362

End: 1418949

Strand: Reverse

Name: engB [H]

Synonym: SPD_1398

Alternate gene names: 116515393

Gene position: 1418949-1418362 (Counterclockwise)

Preceding gene: 116517127

Following gene: 116516493

Centisome position: 69.35

GC content: 44.05

Gene sequence:

>588_bases
ATGGAACTTAACACACACAATGCTGAAATCTTGCTCAGTGCAGCTAATAAGTCCCACTATCCGCAGGATGAACTGCCAGA
GATTGCCCTAGCAGGGCGTTCAAATGTTGGTAAATCCAGCTTTATCAACACTATGTTGAACCGTAAGAATCTCGCCCGTA
CATCAGGAAAACCTGGTAAAACCCAGCTCCTGAACTTTTTTAACATTGATGACAAGATGCGCTTTGTGGATGTGCCTGGT
TATGGCTATGCTCGTGTTTCTAAAAAGGAACGTGAAAAGTGGGGGTGCATGATTGAGGAGTACTTAACGACTCGGGAAAA
TCTCCGTGCGGTTGTCAGTCTAGTTGACCTTCGTCATGACCCGTCAGCAGATGATGTGCAGATGTACGAATTTCTCAAGT
ATTATGAGATTCCAGTCATCATTGTGGCGACCAAGGCGGACAAGATTCCTCGTGGTAAATGGAACAAGCATGAATCAGCA
ATCAAAAAGAAATTAAACTTTGACCCAAGTGACGATTTCATCCTCTTTTCATCTGTCAGCAAGGCAGGGATGGATGAGGC
TTGGGATGCAATCTTAGAAAAATTGTGA

Upstream 100 bases:

>100_bases
TTGAGGTGCCGAGTCAGGAAAATGTGAAATTGGTTCGCATCACTAAAGAAACTGTCGATGGAACGGATAAACCGATCCTA
GAAACAGCCTAGAGGTGACT

Downstream 100 bases:

>100_bases
GGAAAAGAAAATGGCAAAAACAATTCATACAGATAAGGCCCCAAAGGCTATCGGGCCCTATGTTCAAGGAAAAATCGTTG
GCAACCTTTTGTTTGCTAGC

Product: ribosome biogenesis GTP-binding protein YsxC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MELNTHNAEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNIDDKMRFVDVPG
YGYARVSKKEREKWGCMIEEYLTTRENLRAVVSLVDLRHDPSADDVQMYEFLKYYEIPVIIVATKADKIPRGKWNKHESA
IKKKLNFDPSDDFILFSSVSKAGMDEAWDAILEKL

Sequences:

>Translated_195_residues
MELNTHNAEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNIDDKMRFVDVPG
YGYARVSKKEREKWGCMIEEYLTTRENLRAVVSLVDLRHDPSADDVQMYEFLKYYEIPVIIVATKADKIPRGKWNKHESA
IKKKLNFDPSDDFILFSSVSKAGMDEAWDAILEKL
>Mature_195_residues
MELNTHNAEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNIDDKMRFVDVPG
YGYARVSKKEREKWGCMIEEYLTTRENLRAVVSLVDLRHDPSADDVQMYEFLKYYEIPVIIVATKADKIPRGKWNKHESA
IKKKLNFDPSDDFILFSSVSKAGMDEAWDAILEKL

Specific function: Necessary for normal cell division and for the maintenance of normal septation [H]

COG id: COG0218

COG function: function code R; Predicted GTPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI56549685, Length=163, Percent_Identity=35.5828220858896, Blast_Score=89, Evalue=2e-18,
Organism=Escherichia coli, GI145693205, Length=185, Percent_Identity=41.6216216216216, Blast_Score=147, Evalue=5e-37,
Organism=Saccharomyces cerevisiae, GI6320543, Length=133, Percent_Identity=32.3308270676692, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019987
- InterPro:   IPR002917
- InterPro:   IPR001806 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 22274; Mature: 22274

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELNTHNAEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGK
CCCCCCCCEEEEEECCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCH
TQLLNFFNIDDKMRFVDVPGYGYARVSKKEREKWGCMIEEYLTTRENLRAVVSLVDLRHD
HHHHHEECCCCCEEEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PSADDVQMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPSDDFILFSSVS
CCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCC
KAGMDEAWDAILEKL
CCCCHHHHHHHHHCC
>Mature Secondary Structure
MELNTHNAEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGK
CCCCCCCCEEEEEECCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCH
TQLLNFFNIDDKMRFVDVPGYGYARVSKKEREKWGCMIEEYLTTRENLRAVVSLVDLRHD
HHHHHEECCCCCEEEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PSADDVQMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPSDDFILFSSVS
CCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCC
KAGMDEAWDAILEKL
CCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA