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The map label for this gene is 116496252

Identifier: 116496252

GI number: 116496252

Start: 2815454

End: 2815876

Strand: Direct

Name: 116496252

Synonym: LSEI_2833

Alternate gene names: NA

Gene position: 2815454-2815876 (Clockwise)

Preceding gene: 116496246

Following gene: 116496253

Centisome position: 97.24

GC content: 43.74

Gene sequence:

>423_bases
ATGGTAGAAAAAATAAAGGCCACAGATGGTGCGGTTTTTCGGCAGTTGCGACATAATCATCAGCTAACCTTAGCGCAAGT
GGCAGACGACCATAATTCGATTGCTTTTATCAGTAAATTTGAGCAAGGCAAGTCTAATATCAGCTTTTCGCGTTTAACCC
ATTTGCTGTATCGCATTAATATCTCTGTCGAAGAATTTGTCTTTATCCGTGATCTTCAATCCGGCGTTGTGCCGACATCG
AATGATCCTAATTTTGTGTACAACACCTTAACGCATCGCGCCTTTGTCGAAGTACTTGACTATCAGAATCGCTTTTCAAC
TCAGGAACCGACACCAGCAGACTATGCTTATTTCCTCAAAAAGGAGCAGGAATGTCAAGCTCGTTATGCCCAAGACCACA
ACCGCAAACCCGCTTCGAGCTGA

Upstream 100 bases:

>100_bases
GCCCGCTTATGCTCCGGTTTCTAAACGCGCCAGTTCACGCTCTGCTTATTTGTATCTAAAGTGTACGCAGGGTAAAATCG
GATTGAGGTGAAATTCCACT

Downstream 100 bases:

>100_bases
TCAGCATTCAACTTTTTCGGCTAACCATGATTGATCGGGTTAAACAATTAAACCAACCATCTCCATTCAAAAGTGTCGCT
GACGCTATGGCCCAGCTTCA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Facilitator Superfamily Transporter

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MVEKIKATDGAVFRQLRHNHQLTLAQVADDHNSIAFISKFEQGKSNISFSRLTHLLYRINISVEEFVFIRDLQSGVVPTS
NDPNFVYNTLTHRAFVEVLDYQNRFSTQEPTPADYAYFLKKEQECQARYAQDHNRKPASS

Sequences:

>Translated_140_residues
MVEKIKATDGAVFRQLRHNHQLTLAQVADDHNSIAFISKFEQGKSNISFSRLTHLLYRINISVEEFVFIRDLQSGVVPTS
NDPNFVYNTLTHRAFVEVLDYQNRFSTQEPTPADYAYFLKKEQECQARYAQDHNRKPASS
>Mature_140_residues
MVEKIKATDGAVFRQLRHNHQLTLAQVADDHNSIAFISKFEQGKSNISFSRLTHLLYRINISVEEFVFIRDLQSGVVPTS
NDPNFVYNTLTHRAFVEVLDYQNRFSTQEPTPADYAYFLKKEQECQARYAQDHNRKPASS

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16211; Mature: 16211

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEKIKATDGAVFRQLRHNHQLTLAQVADDHNSIAFISKFEQGKSNISFSRLTHLLYRIN
CCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHC
ISVEEFVFIRDLQSGVVPTSNDPNFVYNTLTHRAFVEVLDYQNRFSTQEPTPADYAYFLK
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHC
KEQECQARYAQDHNRKPASS
CHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MVEKIKATDGAVFRQLRHNHQLTLAQVADDHNSIAFISKFEQGKSNISFSRLTHLLYRIN
CCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHC
ISVEEFVFIRDLQSGVVPTSNDPNFVYNTLTHRAFVEVLDYQNRFSTQEPTPADYAYFLK
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHC
KEQECQARYAQDHNRKPASS
CHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA