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The map label for this gene is ydfK [H]

Identifier: 116496077

GI number: 116496077

Start: 2635113

End: 2635811

Strand: Direct

Name: ydfK [H]

Synonym: LSEI_2650

Alternate gene names: 116496077

Gene position: 2635113-2635811 (Clockwise)

Preceding gene: 116496075

Following gene: 116496078

Centisome position: 91.01

GC content: 48.35

Gene sequence:

>699_bases
ATGATGTTCATGGGTTCTATTGTCAATGGGTTGACGATTATCGGTGGCGGGCTCTTGGGCTTGATTCTCCACAGTATTAG
CGATCATGCTAAAGATACTGTCACCAAAAGTCTTGGGCTTGGTACCTTCGCATTGGGCATTCAAATGGCCTTGCAGACAA
AAAGTTTTATTGTTATGGTCATCAGCCTTTGCCTTGGCGGCTTGATCGGTGAGTGGTTGCATATTGAAGATGGCATGAAC
CACCTCGGTTTGATGTTGGAACAGCGCTTTGCCCGCGGCAATCAGCATTTTGCGGAAGGGTTCGTGACCGCCACCCTGAT
TGCTGTCATCGGTGCCATGGGTATTTTAGGCGCGATTCAGGCGGGCGTTTCTGGAGACAATACCACGCTATATACTAAAT
CCGTCATGGACGGGTTCATGGCGATTATGCTGACCGCGTCACTCGGGGTTGGCGTGATCTTTTCCGCGTTGCCAGTGATC
ATTTATCAAGGCACAATCACACTCTTCGCCAGTTTTTTAGTCCAATTCGTTCCCAAGGCATTGATGACGAACGCACTCCG
CGAAATTGGTGCAGTCGGCGGCTTAATGATCTTGGGGATTGGGTTAAACTTGATGGGCATTACCAAAATTCGTATTTCTA
ATCTGCTGCCTGGCTTGCTAGTCCTTGTTGCGATCCTAACTGGTCAGTATTTTCTATGA

Upstream 100 bases:

>100_bases
ACCTTTTTGGTAAAAATGACGCGTTATTTATGGCACACAAGCATGGTATGATGAGACGATTGGCTTGATACTACAAAAAT
AGGTAAACGAGGAAAATGAA

Downstream 100 bases:

>100_bases
TTAATGATTGAACCATTTAGGAGGAGGCTATTGGCAGATCATAAACTGACCGGTTTGAACGGTTGTGGTGATAAATCAGA
GCAGATTTTTACCAAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MMFMGSIVNGLTIIGGGLLGLILHSISDHAKDTVTKSLGLGTFALGIQMALQTKSFIVMVISLCLGGLIGEWLHIEDGMN
HLGLMLEQRFARGNQHFAEGFVTATLIAVIGAMGILGAIQAGVSGDNTTLYTKSVMDGFMAIMLTASLGVGVIFSALPVI
IYQGTITLFASFLVQFVPKALMTNALREIGAVGGLMILGIGLNLMGITKIRISNLLPGLLVLVAILTGQYFL

Sequences:

>Translated_232_residues
MMFMGSIVNGLTIIGGGLLGLILHSISDHAKDTVTKSLGLGTFALGIQMALQTKSFIVMVISLCLGGLIGEWLHIEDGMN
HLGLMLEQRFARGNQHFAEGFVTATLIAVIGAMGILGAIQAGVSGDNTTLYTKSVMDGFMAIMLTASLGVGVIFSALPVI
IYQGTITLFASFLVQFVPKALMTNALREIGAVGGLMILGIGLNLMGITKIRISNLLPGLLVLVAILTGQYFL
>Mature_232_residues
MMFMGSIVNGLTIIGGGLLGLILHSISDHAKDTVTKSLGLGTFALGIQMALQTKSFIVMVISLCLGGLIGEWLHIEDGMN
HLGLMLEQRFARGNQHFAEGFVTATLIAVIGAMGILGAIQAGVSGDNTTLYTKSVMDGFMAIMLTASLGVGVIFSALPVI
IYQGTITLFASFLVQFVPKALMTNALREIGAVGGLMILGIGLNLMGITKIRISNLLPGLLVLVAILTGQYFL

Specific function: Unknown

COG id: COG1811

COG function: function code R; Uncharacterized membrane protein, possible Na+ channel or pump

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789338, Length=166, Percent_Identity=25.9036144578313, Blast_Score=71, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007563 [H]

Pfam domain/function: PF04474 DUF554 [H]

EC number: NA

Molecular weight: Translated: 24356; Mature: 24356

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFMGSIVNGLTIIGGGLLGLILHSISDHAKDTVTKSLGLGTFALGIQMALQTKSFIVMV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
ISLCLGGLIGEWLHIEDGMNHLGLMLEQRFARGNQHFAEGFVTATLIAVIGAMGILGAIQ
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AGVSGDNTTLYTKSVMDGFMAIMLTASLGVGVIFSALPVIIYQGTITLFASFLVQFVPKA
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMTNALREIGAVGGLMILGIGLNLMGITKIRISNLLPGLLVLVAILTGQYFL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMFMGSIVNGLTIIGGGLLGLILHSISDHAKDTVTKSLGLGTFALGIQMALQTKSFIVMV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
ISLCLGGLIGEWLHIEDGMNHLGLMLEQRFARGNQHFAEGFVTATLIAVIGAMGILGAIQ
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AGVSGDNTTLYTKSVMDGFMAIMLTASLGVGVIFSALPVIIYQGTITLFASFLVQFVPKA
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMTNALREIGAVGGLMILGIGLNLMGITKIRISNLLPGLLVLVAILTGQYFL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]