Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

Click here to switch to the map view.

The map label for this gene is 116495841

Identifier: 116495841

GI number: 116495841

Start: 2387328

End: 2387552

Strand: Direct

Name: 116495841

Synonym: LSEI_2394

Alternate gene names: NA

Gene position: 2387328-2387552 (Clockwise)

Preceding gene: 116495838

Following gene: 116495851

Centisome position: 82.46

GC content: 38.67

Gene sequence:

>225_bases
ATGAATGCATACAAGCAGTTGAAACAACCACTGTCAATGTGGATCATTAATTGTTGCTTAGTGGCGTTGCTCTTTCTTGT
TCCCGATGATTCAAGTATCTTTGTCTATATCGTGATTGACCTCGCAATCGTTGCTAACGGTTTTGATTTATTAAAGAAAC
TATTTGGTCTGTCAAAGCATGCGGACTGGCACCACAACACTTGGAATCGTGATGAATCAAAATAA

Upstream 100 bases:

>100_bases
TGACCCATTTTTCTTGAACACTAGTTATTATGAGTATGAAATGATGTAATGATACTGAAAGTTTAAAGATGCTGAGCATA
ACTCAATGGAGATGACTTTC

Downstream 100 bases:

>100_bases
GCCTACAAACTAAGCGTCGCCTCGTCATCGCTTAATTTGTAGGCTTGTTTTTTTGACTCTTTTCACACACCACAATAAAA
ATAACGAGAAAGATCAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MNAYKQLKQPLSMWIINCCLVALLFLVPDDSSIFVYIVIDLAIVANGFDLLKKLFGLSKHADWHHNTWNRDESK

Sequences:

>Translated_74_residues
MNAYKQLKQPLSMWIINCCLVALLFLVPDDSSIFVYIVIDLAIVANGFDLLKKLFGLSKHADWHHNTWNRDESK
>Mature_74_residues
MNAYKQLKQPLSMWIINCCLVALLFLVPDDSSIFVYIVIDLAIVANGFDLLKKLFGLSKHADWHHNTWNRDESK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8563; Mature: 8563

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAYKQLKQPLSMWIINCCLVALLFLVPDDSSIFVYIVIDLAIVANGFDLLKKLFGLSKH
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCC
ADWHHNTWNRDESK
CCCCCCCCCCCCCC
>Mature Secondary Structure
MNAYKQLKQPLSMWIINCCLVALLFLVPDDSSIFVYIVIDLAIVANGFDLLKKLFGLSKH
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCC
ADWHHNTWNRDESK
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA