Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116495838

Identifier: 116495838

GI number: 116495838

Start: 2386111

End: 2386350

Strand: Direct

Name: 116495838

Synonym: LSEI_2391

Alternate gene names: NA

Gene position: 2386111-2386350 (Clockwise)

Preceding gene: 116495836

Following gene: 116495841

Centisome position: 82.41

GC content: 39.17

Gene sequence:

>240_bases
TTGAAAATGGAACTAATTGCTGCCTCAAAAATGAACTTCGGCAAACATCCCATGAGCAGGCACTTCAATAAAAGATCCAA
AACTGTCTTACACGTTTGTCGATCAACCACACGTGTGACAAAGAATAAACTTAAATTGAAGCATCTATTTGAGACGCCGA
GCTATCTCTGGTCACTGCTAATCGAAGTTAAAATGATTGAAGTAACTAAAGCAATGGCGCAGATACCGACAATCTTGTGA

Upstream 100 bases:

>100_bases
AACCACATCGCATCCAGTTAATAAGTGCCTATAAAATGACTACCACAAAAATACCTCCAACTTTCTTGATTTATCAAGAA
AGTTGGAGGTTGTCTGGATT

Downstream 100 bases:

>100_bases
CAACTTTTAAGAGATATATGGTATCGATAGGCAGTAGTAAGCATAGGTACGATGCTTACTGTCAGCAAATTTCTTCGTAC
GCTATCGCCATGTGCAAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MKMELIAASKMNFGKHPMSRHFNKRSKTVLHVCRSTTRVTKNKLKLKHLFETPSYLWSLLIEVKMIEVTKAMAQIPTIL

Sequences:

>Translated_79_residues
MKMELIAASKMNFGKHPMSRHFNKRSKTVLHVCRSTTRVTKNKLKLKHLFETPSYLWSLLIEVKMIEVTKAMAQIPTIL
>Mature_79_residues
MKMELIAASKMNFGKHPMSRHFNKRSKTVLHVCRSTTRVTKNKLKLKHLFETPSYLWSLLIEVKMIEVTKAMAQIPTIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9212; Mature: 9212

Theoretical pI: Translated: 11.20; Mature: 11.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
7.6 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
7.6 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMELIAASKMNFGKHPMSRHFNKRSKTVLHVCRSTTRVTKNKLKLKHLFETPSYLWSLL
CCCCHHCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IEVKMIEVTKAMAQIPTIL
HHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKMELIAASKMNFGKHPMSRHFNKRSKTVLHVCRSTTRVTKNKLKLKHLFETPSYLWSLL
CCCCHHCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IEVKMIEVTKAMAQIPTIL
HHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA