| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is kup
Identifier: 116495785
GI number: 116495785
Start: 2330896
End: 2332950
Strand: Direct
Name: kup
Synonym: LSEI_2333
Alternate gene names: 116495785
Gene position: 2330896-2332950 (Clockwise)
Preceding gene: 116495784
Following gene: 116495789
Centisome position: 80.51
GC content: 47.35
Gene sequence:
>2055_bases ATGGCGTCAGGCTTGACTGCTAATAAGAAACTGCGACATAAAATTACTGCCGCGGCTTTACTGGTAACCCTCGGTGTCGT CTATGGCGATATCGGGACGTCACCACTATACGTAATGAAATCAATCGTTGCTGGCAACGGCGGCATGGGACATTTTGATA CTGACTTTTTGGTCGGCTCAGTGTCCTTGATTTTCTGGACCCTGCTCATTATCACCACGGTTAAATATGTCTTGATTGCA TTACGGGCTGATAACAATGGTGAAGGCGGGATCTTTGCGCTGTATACGCTTGTTCGCCAGCGCGCTCGTTGGTTGGTACT GCCCGCCATGGTTGGCGGTGCTGCTCTGCTGGCAGATGGGATGCTGACACCGGCTGTGACCGTCACAACCGCGATTGAAG GTTTGAAGGGTGTCCATATTAACGGCAACATCTTAATCGACAATCAGCAACAGGTGATTTGGGTCACCGTTTTGATCATT ACCTTCCTGTTCTTCATTCAGCGATTTGGTACCGATCTGATTGGTAAGGCGTTTGGTCCGATCATGTTTGTCTGGTTTAC ATTCTTAGGCGTTGCTGGCTTTATTGCCTTGTCAAAGGACTGGTCCATGTTGCGCGCCTTGAACCCTTATTACGCACTCC ATTTATTGGTCAGTCCAGACAATAAAATGGGGCTCTTCATTCTTGGCAGTATTTTCCTAGCAACCACCGGTGCTGAGGCA TTGTATTCTGACATGGGCCATGTTGGTCGCGGTAACATCTATCTCAGCTGGCCATATGTCAATATCTGTTTGGTGCTCAA CTATTTTGGCCAAGCTGTCTGGCTGGATCAAAATTCCAAAGTAACGGCGTTCAACAAGATTACCGACTTCAATCCGTTCT TTCAGATGTTGCCAGAAAGCATCCGGTTAGGCGCAATTATTTTAGCAACCTTGGCGGCGATCATCGCATCACAAGCATTG ATTTCCGGCTCTTATACTCTGGTTTCCGAAGCTATTAAACTGCGCTTCTTGCCACGACTGCACATCATTTACCCAACAAG GTTAAAGGGGCAGCTGTATATTCCAGTCGTCAACACCATTTTATGGTTGGCTTGCTTAGCGATCATTGGCTACTTCAAAA CCAGTGCTGAAATGGAAGGCGCTTATGGCTTGGCCATCACCATTACTATGCTGATGACCACCCTACTGTTGTACCAATAC CTGCGTTCGCGTCATGCGCCTGCTGTGGTTGCGATCGGGACATTGATCTTCTTTAGTGCCATTGAAACAGTCTTCTTCAT CTCCAGCGCGGTTAAGTTCTTGCACGGTGGTTATGTCACCGCCATGATCGCGTTTATCATTTTGGCCGTGATGTATGTCT GGCAATACGGTGGCAGAATTCGCGACGACAACACTTATCGGGCCGAAATGGCTTCGCTTTTTGCCTATAAAAATCAACTG TCCGAACTTCGCAACGATCCAGATTATCCAACATACACCACCAACTTGGTTTACATGACCCAAATTGCGAATGACCATTA CATCAAAAAGGAAATTCTCTACTCAATTTTGGACAAACGGCCAAAACGCGCACGGGTTTACTGGTTTGTTACTGTCAATG TTACGGATGAACCGTATACCGCCGAATATACAACGGATACGTATGGGACCGATTATATGGTCAACGTCCAACTCTATCTC GGCTTCCGGATGGAACAACAGGTCAACGTGTTCTTACGGCAAATTGTCAATGACATGATGCGTGAAGGTGAATTACCAAC GCAACCGCAAAAATACACAACCATTCCTGATCGACAAGTTGGCGACTGGACTTTTGTCTTGCTGCACGAAGAACTTTCAC CGCAGACCCAGATCAAAGGTTTCCAGAAGGCCATCATTCAGGCGCGGCTACGACTCCAGCACATCGCAGTTTCACCCGCG CAATGGTTCGGCTTGGAATATGCGGATACCATCGATGAAACCGTGCCACTGGTTCTTGGTAAAATTCCGATTACCAAACT CAATCGACTAACGCGTTCCCAAGCAGAAGCTCAACCCGAAGATGAAGACGATTAA
Upstream 100 bases:
>100_bases AACTAAATTTATTATTCAGGCGAACGAATGCCGCAAGTTCGCCTTACAATATGTCGTGATTCTGCTACAATGACGGTATT ACTTTTCAGGAGGCTCAAAA
Downstream 100 bases:
>100_bases GTCGCGTTACTAAAAAGAAGCTATATCTGATGCACAGCATTCTGCTGGGCGCGATATAGCTTCTTTTTTATCCATCAAGT CGATTTTCGTTTTTTGTAAA
Product: K+ transporter
Products: K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 684; Mature: 683
Protein sequence:
>684_residues MASGLTANKKLRHKITAAALLVTLGVVYGDIGTSPLYVMKSIVAGNGGMGHFDTDFLVGSVSLIFWTLLIITTVKYVLIA LRADNNGEGGIFALYTLVRQRARWLVLPAMVGGAALLADGMLTPAVTVTTAIEGLKGVHINGNILIDNQQQVIWVTVLII TFLFFIQRFGTDLIGKAFGPIMFVWFTFLGVAGFIALSKDWSMLRALNPYYALHLLVSPDNKMGLFILGSIFLATTGAEA LYSDMGHVGRGNIYLSWPYVNICLVLNYFGQAVWLDQNSKVTAFNKITDFNPFFQMLPESIRLGAIILATLAAIIASQAL ISGSYTLVSEAIKLRFLPRLHIIYPTRLKGQLYIPVVNTILWLACLAIIGYFKTSAEMEGAYGLAITITMLMTTLLLYQY LRSRHAPAVVAIGTLIFFSAIETVFFISSAVKFLHGGYVTAMIAFIILAVMYVWQYGGRIRDDNTYRAEMASLFAYKNQL SELRNDPDYPTYTTNLVYMTQIANDHYIKKEILYSILDKRPKRARVYWFVTVNVTDEPYTAEYTTDTYGTDYMVNVQLYL GFRMEQQVNVFLRQIVNDMMREGELPTQPQKYTTIPDRQVGDWTFVLLHEELSPQTQIKGFQKAIIQARLRLQHIAVSPA QWFGLEYADTIDETVPLVLGKIPITKLNRLTRSQAEAQPEDEDD
Sequences:
>Translated_684_residues MASGLTANKKLRHKITAAALLVTLGVVYGDIGTSPLYVMKSIVAGNGGMGHFDTDFLVGSVSLIFWTLLIITTVKYVLIA LRADNNGEGGIFALYTLVRQRARWLVLPAMVGGAALLADGMLTPAVTVTTAIEGLKGVHINGNILIDNQQQVIWVTVLII TFLFFIQRFGTDLIGKAFGPIMFVWFTFLGVAGFIALSKDWSMLRALNPYYALHLLVSPDNKMGLFILGSIFLATTGAEA LYSDMGHVGRGNIYLSWPYVNICLVLNYFGQAVWLDQNSKVTAFNKITDFNPFFQMLPESIRLGAIILATLAAIIASQAL ISGSYTLVSEAIKLRFLPRLHIIYPTRLKGQLYIPVVNTILWLACLAIIGYFKTSAEMEGAYGLAITITMLMTTLLLYQY LRSRHAPAVVAIGTLIFFSAIETVFFISSAVKFLHGGYVTAMIAFIILAVMYVWQYGGRIRDDNTYRAEMASLFAYKNQL SELRNDPDYPTYTTNLVYMTQIANDHYIKKEILYSILDKRPKRARVYWFVTVNVTDEPYTAEYTTDTYGTDYMVNVQLYL GFRMEQQVNVFLRQIVNDMMREGELPTQPQKYTTIPDRQVGDWTFVLLHEELSPQTQIKGFQKAIIQARLRLQHIAVSPA QWFGLEYADTIDETVPLVLGKIPITKLNRLTRSQAEAQPEDEDD >Mature_683_residues ASGLTANKKLRHKITAAALLVTLGVVYGDIGTSPLYVMKSIVAGNGGMGHFDTDFLVGSVSLIFWTLLIITTVKYVLIAL RADNNGEGGIFALYTLVRQRARWLVLPAMVGGAALLADGMLTPAVTVTTAIEGLKGVHINGNILIDNQQQVIWVTVLIIT FLFFIQRFGTDLIGKAFGPIMFVWFTFLGVAGFIALSKDWSMLRALNPYYALHLLVSPDNKMGLFILGSIFLATTGAEAL YSDMGHVGRGNIYLSWPYVNICLVLNYFGQAVWLDQNSKVTAFNKITDFNPFFQMLPESIRLGAIILATLAAIIASQALI SGSYTLVSEAIKLRFLPRLHIIYPTRLKGQLYIPVVNTILWLACLAIIGYFKTSAEMEGAYGLAITITMLMTTLLLYQYL RSRHAPAVVAIGTLIFFSAIETVFFISSAVKFLHGGYVTAMIAFIILAVMYVWQYGGRIRDDNTYRAEMASLFAYKNQLS ELRNDPDYPTYTTNLVYMTQIANDHYIKKEILYSILDKRPKRARVYWFVTVNVTDEPYTAEYTTDTYGTDYMVNVQLYLG FRMEQQVNVFLRQIVNDMMREGELPTQPQKYTTIPDRQVGDWTFVLLHEELSPQTQIKGFQKAIIQARLRLQHIAVSPAQ WFGLEYADTIDETVPLVLGKIPITKLNRLTRSQAEAQPEDEDD
Specific function: Transport of potassium into the cell
COG id: COG3158
COG function: function code P; K+ transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAK/KUP transporter (TC 2.A.72) family
Homologues:
Organism=Escherichia coli, GI48994960, Length=546, Percent_Identity=35.1648351648352, Blast_Score=276, Evalue=4e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KUP_LACC3 (Q035P5)
Other databases:
- EMBL: CP000423 - RefSeq: YP_807519.1 - STRING: Q035P5 - GeneID: 4420897 - GenomeReviews: CP000423_GR - KEGG: lca:LSEI_2333 - eggNOG: COG3158 - HOGENOM: HBG351154 - OMA: HLLFSPE - PhylomeDB: Q035P5 - ProtClustDB: CLSK770921 - BioCyc: LCAS321967:LSEI_2333-MONOMER - HAMAP: MF_01522 - InterPro: IPR003855 - InterPro: IPR023051
Pfam domain/function: PF02705 K_trans
EC number: NA
Molecular weight: Translated: 76692; Mature: 76560
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x15544be4)-; HASH(0x175ba5b8)-; HASH(0x171121f8)-; HASH(0x175ba4d4)-; HASH(0x175b6da8)-; HASH(0x13a633f0)-; HASH(0x154ed8f4)-; HASH(0x154ed7c8)-; HASH(0x175b3cdc)-; HASH(0x13a63738)-; HASH(0x175b6b50)-; HASH(0x12f11704)-;
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASGLTANKKLRHKITAAALLVTLGVVYGDIGTSPLYVMKSIVAGNGGMGHFDTDFLVGS CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHH VSLIFWTLLIITTVKYVLIALRADNNGEGGIFALYTLVRQRARWLVLPAMVGGAALLADG HHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHCEEEEHHHHCCHHHHHCC MLTPAVTVTTAIEGLKGVHINGNILIDNQQQVIWVTVLIITFLFFIQRFGTDLIGKAFGP CCCCHHHHHHHHHCCCEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH IMFVWFTFLGVAGFIALSKDWSMLRALNPYYALHLLVSPDNKMGLFILGSIFLATTGAEA HHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCHHH LYSDMGHVGRGNIYLSWPYVNICLVLNYFGQAVWLDQNSKVTAFNKITDFNPFFQMLPES HHHHCCCCCCCCEEEECCHHHHHHHHHHHCCEEEECCCCCEEEECCCCCCCHHHHHCHHH IRLGAIILATLAAIIASQALISGSYTLVSEAIKLRFLPRLHIIYPTRLKGQLYIPVVNTI HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEHHHHHHH LWLACLAIIGYFKTSAEMEGAYGLAITITMLMTTLLLYQYLRSRHAPAVVAIGTLIFFSA HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH IETVFFISSAVKFLHGGYVTAMIAFIILAVMYVWQYGGRIRDDNTYRAEMASLFAYKNQL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHH SELRNDPDYPTYTTNLVYMTQIANDHYIKKEILYSILDKRPKRARVYWFVTVNVTDEPYT HHHCCCCCCCCEEECEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCE AEYTTDTYGTDYMVNVQLYLGFRMEQQVNVFLRQIVNDMMREGELPTQPQKYTTIPDRQV EEEECCCCCCCEEEEEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC GDWTFVLLHEELSPQTQIKGFQKAIIQARLRLQHIAVSPAQWFGLEYADTIDETVPLVLG CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHC KIPITKLNRLTRSQAEAQPEDEDD CCCHHHHHHHHHHHHCCCCCCCCH >Mature Secondary Structure ASGLTANKKLRHKITAAALLVTLGVVYGDIGTSPLYVMKSIVAGNGGMGHFDTDFLVGS CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHH VSLIFWTLLIITTVKYVLIALRADNNGEGGIFALYTLVRQRARWLVLPAMVGGAALLADG HHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHCEEEEHHHHCCHHHHHCC MLTPAVTVTTAIEGLKGVHINGNILIDNQQQVIWVTVLIITFLFFIQRFGTDLIGKAFGP CCCCHHHHHHHHHCCCEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH IMFVWFTFLGVAGFIALSKDWSMLRALNPYYALHLLVSPDNKMGLFILGSIFLATTGAEA HHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCHHH LYSDMGHVGRGNIYLSWPYVNICLVLNYFGQAVWLDQNSKVTAFNKITDFNPFFQMLPES HHHHCCCCCCCCEEEECCHHHHHHHHHHHCCEEEECCCCCEEEECCCCCCCHHHHHCHHH IRLGAIILATLAAIIASQALISGSYTLVSEAIKLRFLPRLHIIYPTRLKGQLYIPVVNTI HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEHHHHHHH LWLACLAIIGYFKTSAEMEGAYGLAITITMLMTTLLLYQYLRSRHAPAVVAIGTLIFFSA HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH IETVFFISSAVKFLHGGYVTAMIAFIILAVMYVWQYGGRIRDDNTYRAEMASLFAYKNQL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHH SELRNDPDYPTYTTNLVYMTQIANDHYIKKEILYSILDKRPKRARVYWFVTVNVTDEPYT HHHCCCCCCCCEEECEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCE AEYTTDTYGTDYMVNVQLYLGFRMEQQVNVFLRQIVNDMMREGELPTQPQKYTTIPDRQV EEEECCCCCCCEEEEEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC GDWTFVLLHEELSPQTQIKGFQKAIIQARLRLQHIAVSPAQWFGLEYADTIDETVPLVLG CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHC KIPITKLNRLTRSQAEAQPEDEDD CCCHHHHHHHHHHHHCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: K (I) [Periplasm] [C]
Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA