The gene/protein map for NC_008526 is currently unavailable.
Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

Click here to switch to the map view.

The map label for this gene is 116495086

Identifier: 116495086

GI number: 116495086

Start: 1599819

End: 1600133

Strand: Direct

Name: 116495086

Synonym: LSEI_1604

Alternate gene names: NA

Gene position: 1599819-1600133 (Clockwise)

Preceding gene: 116495073

Following gene: 116495100

Centisome position: 55.26

GC content: 47.3

Gene sequence:

>315_bases
ATGGTCTCAACCTTTATTTACTGGGCCGTGTTTGCCGCTCTCGCTGCTTGGGGACTGTGGAGTTTGGTCTTCTCATGTGT
TTACCTGAGCAACCATGAAAACGGCAATTTGTGGTTCTTTGCTATCATTAATGCGATTCTTGGCCTTCTAGGCTGGTTAT
TCGCTTGGATCATGAGTAATACGGCATGGCAACAATACTGGTTTGCAAGTAAGGTGCAGCCATCTGCATGGTTCACCTAC
CTGCTCATCGGTTACCTTGTCTTGATTGTCCTACAGGTCATCCTTGGCCGGGAGAAGAAAGTGCAAGCAGCTTAA

Upstream 100 bases:

>100_bases
GGCCACTTATGCTCCGGTTTCTAACCGCGCCTGTTCGCGCTCTTCCAGTTTCCCCTAGTTTCGTGGTACACTGAACATGT
GAAAAATTGGAGGGAAGAAT

Downstream 100 bases:

>100_bases
TGTCATAAAAAAAGCGTCGTACTGGTTTTTCGCCAGCACGGCGCTTTTTCGTTATTCTTCATTTTAATTAAGCTTCGACC
TGAATCAAACCCTTAAATAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MVSTFIYWAVFAALAAWGLWSLVFSCVYLSNHENGNLWFFAIINAILGLLGWLFAWIMSNTAWQQYWFASKVQPSAWFTY
LLIGYLVLIVLQVILGREKKVQAA

Sequences:

>Translated_104_residues
MVSTFIYWAVFAALAAWGLWSLVFSCVYLSNHENGNLWFFAIINAILGLLGWLFAWIMSNTAWQQYWFASKVQPSAWFTY
LLIGYLVLIVLQVILGREKKVQAA
>Mature_104_residues
MVSTFIYWAVFAALAAWGLWSLVFSCVYLSNHENGNLWFFAIINAILGLLGWLFAWIMSNTAWQQYWFASKVQPSAWFTY
LLIGYLVLIVLQVILGREKKVQAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11971; Mature: 11971

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSTFIYWAVFAALAAWGLWSLVFSCVYLSNHENGNLWFFAIINAILGLLGWLFAWIMSN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
TAWQQYWFASKVQPSAWFTYLLIGYLVLIVLQVILGREKKVQAA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure
MVSTFIYWAVFAALAAWGLWSLVFSCVYLSNHENGNLWFFAIINAILGLLGWLFAWIMSN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
TAWQQYWFASKVQPSAWFTYLLIGYLVLIVLQVILGREKKVQAA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA