| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is folA [H]
Identifier: 116494874
GI number: 116494874
Start: 1377411
End: 1377902
Strand: Direct
Name: folA [H]
Synonym: LSEI_1388
Alternate gene names: 116494874
Gene position: 1377411-1377902 (Clockwise)
Preceding gene: 116494873
Following gene: 116494876
Centisome position: 47.57
GC content: 47.36
Gene sequence:
>492_bases ATGGTAGCATTTTTGTGGGCGCAGGATCGGGATGGTGTAATCGGTAAAGACGGCCATTTGCCATGGCATTTGCCAGATGA TTTGCATTATTTCCGGACTCAGACTGAAGGGAAAATGATGGTGGTTGGGCGTCGCACGTACGAAAGTTTTCCAAAACGGC CATTACCAGATCGTACGAACGTGGTTTTGACGCACCAGGCTGATTACCAGGCACCAGGCGCGATTGTCTTGCATCAGGTT GCTGAAGTGCTTGATTATGCGAAGGAACATGCAGATCAGGCATTAGTCATCGCCGGTGGTGCTCAAATCTTTAGCGCCTT TAAAGACATGGTTGATACCTTGCTCGTGACCCGTCTAGCTGGCAGTTTTGCAGGTGACACTAAAATGATTCCACTAGATT GGGATGCGTTTACTAAAACCTCAAGCCGAACTGTCGAAGATCAAAACCCCGCTTTGACGCATACTTATGAAGTTTGGCAA AAGCAAAAATGA
Upstream 100 bases:
>100_bases CGGCGAGAAAGCTTATTATTGGCGATATCGAAGCTGTTTAAGTGACGGTTCTGACTGATTGCAGTACCATCAGACGTATC AAAAACGAGGGGGATTTTAA
Downstream 100 bases:
>100_bases TCTGACGCGTTTAGCAGCTAAAGAAATTTTTTAAGGAACTTAAATAGTTATGTGCATTTGTAGTTCGTTTTTTTAACTAA AATTGACTCATGTGCAAAAA
Product: dihydrofolate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MVAFLWAQDRDGVIGKDGHLPWHLPDDLHYFRTQTEGKMMVVGRRTYESFPKRPLPDRTNVVLTHQADYQAPGAIVLHQV AEVLDYAKEHADQALVIAGGAQIFSAFKDMVDTLLVTRLAGSFAGDTKMIPLDWDAFTKTSSRTVEDQNPALTHTYEVWQ KQK
Sequences:
>Translated_163_residues MVAFLWAQDRDGVIGKDGHLPWHLPDDLHYFRTQTEGKMMVVGRRTYESFPKRPLPDRTNVVLTHQADYQAPGAIVLHQV AEVLDYAKEHADQALVIAGGAQIFSAFKDMVDTLLVTRLAGSFAGDTKMIPLDWDAFTKTSSRTVEDQNPALTHTYEVWQ KQK >Mature_163_residues MVAFLWAQDRDGVIGKDGHLPWHLPDDLHYFRTQTEGKMMVVGRRTYESFPKRPLPDRTNVVLTHQADYQAPGAIVLHQV AEVLDYAKEHADQALVIAGGAQIFSAFKDMVDTLLVTRLAGSFAGDTKMIPLDWDAFTKTSSRTVEDQNPALTHTYEVWQ KQK
Specific function: Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis [H]
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DHFR (dihydrofolate reductase) domain [H]
Homologues:
Organism=Escherichia coli, GI1786233, Length=141, Percent_Identity=30.4964539007092, Blast_Score=68, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17505899, Length=162, Percent_Identity=29.6296296296296, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 10,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012259 - InterPro: IPR017925 - InterPro: IPR001796 [H]
Pfam domain/function: PF00186 DHFR_1 [H]
EC number: =1.5.1.3 [H]
Molecular weight: Translated: 18411; Mature: 18411
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS00075 DHFR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAFLWAQDRDGVIGKDGHLPWHLPDDLHYFRTQTEGKMMVVGRRTYESFPKRPLPDRTN CEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEECCHHHHCCCCCCCCCCC VVLTHQADYQAPGAIVLHQVAEVLDYAKEHADQALVIAGGAQIFSAFKDMVDTLLVTRLA EEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHH GSFAGDTKMIPLDWDAFTKTSSRTVEDQNPALTHTYEVWQKQK CCCCCCCEEEEECCHHHCCCCCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MVAFLWAQDRDGVIGKDGHLPWHLPDDLHYFRTQTEGKMMVVGRRTYESFPKRPLPDRTN CEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEECCHHHHCCCCCCCCCCC VVLTHQADYQAPGAIVLHQVAEVLDYAKEHADQALVIAGGAQIFSAFKDMVDTLLVTRLA EEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHH GSFAGDTKMIPLDWDAFTKTSSRTVEDQNPALTHTYEVWQKQK CCCCCCCEEEEECCHHHCCCCCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3928445; 98527; 405008; 6815179; 1905571; 7547901; 9514736; 10091649 [H]